EnhancerDB
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  3. vista25098[chr17:48228924-48229616]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25098[chr17:48228924-48229616]
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Tissue distribution of vista25098
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Transcription factor that possibly regulate vista25098[chr17:48228924-48229616]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48228815 48229341 GABPA UCSC Txn Factor no Conserved 108270393
chr17 48229278 48229742 MAZ UCSC Txn Factor no Conserved 108270416
chr17 48229343 48230102 GABPA UCSC Txn Factor no Conserved 108270450
chr17 48229349 48229639 ZNF143 UCSC Txn Factor no Conserved 108270451
chr17 48229362 48229856 ZNF263 UCSC Txn Factor no Conserved 108270457
chr17 48229367 48229938 ELF1 UCSC Txn Factor no Conserved 108270461
chr17 48229386 48229920 RUNX3 UCSC Txn Factor no Conserved 108270481
chr17 48229389 48229580 FOSL1 UCSC Txn Factor no Conserved 108270484
chr17 48229446 48229654 EGR1 UCSC Txn Factor no Conserved 108270508
chr17 48228924 48228937 EOMES JASPAR yes 21253547
chr17 48228926 48228936 TBR1 JASPAR yes 21253548
chr17 48228926 48228937 TBX20 JASPAR yes 21253549
chr17 48228926 48228937 TBX2 JASPAR yes 21253550
chr17 48228928 48228931 MYB TRANSFAC yes 21253551
chr17 48228963 48228973 TBX21 JASPAR yes 21253552
chr17 48228963 48228974 TBX20 JASPAR yes 21253553
chr17 48228963 48228974 TBX2 JASPAR yes 21253554
chr17 48228963 48228976 EOMES JASPAR yes 21253555
chr17 48228964 48228972 MGA JASPAR yes 21253556
chr17 48228964 48228972 TBX15 JASPAR yes 21253557
chr17 48228964 48228972 TBX1 JASPAR yes 21253558
chr17 48228964 48228972 TBX4 JASPAR yes 21253559
chr17 48228964 48228972 TBX5 JASPAR yes 21253560
chr17 48228964 48228974 TBR1 JASPAR yes 21253561
chr17 48228978 48228982 H4TF2 TRANSFAC yes 21253562
chr17 48228987 48229000 NR2F1 JASPAR yes 21253563
chr17 48228989 48229000 ESRRA JASPAR yes 21253564
chr17 48228990 48228998 NR4A2 JASPAR yes 21253565
chr17 48228999 48229019 RREB1 JASPAR yes 21253566
chr17 48229000 48229021 ZNF263 JASPAR yes 21253567
chr17 48229001 48229021 RREB1 JASPAR yes 21253568
chr17 48229003 48229008 SP1 TRANSFAC yes 21253569
chr17 48229004 48229014 ZNF740 JASPAR yes 21253570
chr17 48229004 48229018 PLAG1 JASPAR yes 21253571
chr17 48229006 48229015 SP1 TRANSFAC yes 21253572
chr17 48229006 48229016 SP1 JASPAR yes 21253573
chr17 48229006 48229027 ZNF263 JASPAR yes 21253574
chr17 48229008 48229014 MAZ TRANSFAC yes 21253575
chr17 48229011 48229032 ZNF263 JASPAR yes 21253576
chr17 48229014 48229035 ZNF263 JASPAR yes 21253577
chr17 48229029 48229042 NFKB1 JASPAR yes 21253578
chr17 48229078 48229096 NR3C1 JASPAR yes 21253579
chr17 48229093 48229097 NFE TRANSFAC yes 21253580
chr17 48229094 48229106 PKNOX2 JASPAR yes 21253581
chr17 48229094 48229106 TGIF2 JASPAR yes 21253582
chr17 48229100 48229104 NFE TRANSFAC yes 21253583
chr17 48229108 48229122 MTF1 JASPAR yes 21253584
chr17 48229150 48229164 SPI1 JASPAR yes 21253585
chr17 48229150 48229164 SPIC JASPAR yes 21253586
chr17 48229152 48229162 ELK1 JASPAR yes 21253587
chr17 48229152 48229164 EHF JASPAR yes 21253588
chr17 48229152 48229164 ELF4 JASPAR yes 21253589
chr17 48229152 48229165 ELF3 JASPAR yes 21253590
chr17 48229153 48229164 ELF5 JASPAR yes 21253591
chr17 48229153 48229164 ETV2 JASPAR yes 21253592
chr17 48229154 48229164 ELK1 JASPAR yes 21253593
chr17 48229154 48229164 ELK3 JASPAR yes 21253594
chr17 48229154 48229164 ERF JASPAR yes 21253595
chr17 48229154 48229164 ERG JASPAR yes 21253596
chr17 48229154 48229164 ETS1 JASPAR yes 21253597
chr17 48229154 48229164 ETV1 JASPAR yes 21253598
chr17 48229154 48229164 ETV3 JASPAR yes 21253599
chr17 48229154 48229164 ETV4 JASPAR yes 21253600
chr17 48229154 48229164 ETV5 JASPAR yes 21253601
chr17 48229154 48229164 FEV JASPAR yes 21253602
chr17 48229154 48229164 FLI1 JASPAR yes 21253603
chr17 48229154 48229165 FLI1 JASPAR yes 21253604
chr17 48229156 48229162 ETS1 JASPAR yes 21253605
chr17 48229156 48229162 SPI1 JASPAR yes 21253606
chr17 48229159 48229164 ETS2 TRANSFAC yes 21253607
chr17 48229159 48229167 EHF JASPAR yes 21253608
chr17 48229186 48229201 TFAP2A JASPAR yes 21253609
chr17 48229188 48229203 TFAP2A JASPAR yes 21253610
chr17 48229188 48229203 TFAP2C JASPAR yes 21253611
chr17 48229189 48229200 TFAP2A JASPAR yes 21253612
chr17 48229189 48229201 INSM1 JASPAR yes 21253613
chr17 48229190 48229199 TFAP2A JASPAR yes 21253614
chr17 48229193 48229208 HNF4G JASPAR yes 21253615
chr17 48229194 48229199 SP1 TRANSFAC yes 21253616
chr17 48229194 48229208 NR2F1 JASPAR yes 21253617
chr17 48229194 48229209 HNF4A JASPAR yes 21253618
chr17 48229205 48229223 NFYA JASPAR yes 21253619
chr17 48229222 48229225 MYB TRANSFAC yes 21253620
chr17 48229243 48229261 ESR1 JASPAR yes 21253621
chr17 48229251 48229266 AR JASPAR yes 21253622
chr17 48229258 48229278 RREB1 JASPAR yes 21253623
chr17 48229263 48229283 RREB1 JASPAR yes 21253624
chr17 48229264 48229284 RREB1 JASPAR yes 21253625
chr17 48229266 48229286 RREB1 JASPAR yes 21253626
chr17 48229267 48229287 RREB1 JASPAR yes 21253627
chr17 48229268 48229288 RREB1 JASPAR yes 21253628
chr17 48229268 48229289 ZNF263 JASPAR yes 21253629
chr17 48229269 48229289 RREB1 JASPAR yes 21253630
chr17 48229271 48229276 SP1 TRANSFAC yes 21253631
chr17 48229271 48229281 ZNF740 JASPAR yes 21253632
chr17 48229271 48229291 RREB1 JASPAR yes 21253633
chr17 48229272 48229282 SP1 JASPAR yes 21253634
chr17 48229272 48229282 ZNF740 JASPAR yes 21253635
chr17 48229274 48229284 ZNF740 JASPAR yes 21253636
chr17 48229275 48229285 SP1 JASPAR yes 21253637
chr17 48229276 48229286 SP1 JASPAR yes 21253638
chr17 48229279 48229284 SP1 TRANSFAC yes 21253639
chr17 48229280 48229290 ZNF740 JASPAR yes 21253640
chr17 48229281 48229286 TFAP2A TRANSFAC yes 21253641
chr17 48229281 48229287 MZF1 JASPAR yes 21253642
chr17 48229281 48229291 SP1 JASPAR yes 21253643
chr17 48229282 48229302 ESR1 JASPAR yes 21253644
chr17 48229283 48229289 MAZ TRANSFAC yes 21253645
chr17 48229285 48229305 PPARG JASPAR yes 21253646
chr17 48229286 48229304 ESR2 JASPAR yes 21253647
chr17 48229287 48229302 ESR2 JASPAR yes 21253648
chr17 48229310 48229329 RFX2 JASPAR yes 21253649
chr17 48229311 48229315 NFE TRANSFAC yes 21253650
chr17 48229312 48229327 RFX5 JASPAR yes 21253651
chr17 48229327 48229337 MSC JASPAR yes 21253652
chr17 48229339 48229354 HNF4A JASPAR yes 21253653
chr17 48229340 48229354 RXRB JASPAR yes 21253654
chr17 48229340 48229354 RXRG JASPAR yes 21253655
chr17 48229340 48229355 HNF4G JASPAR yes 21253656
chr17 48229340 48229355 NR2C2 JASPAR yes 21253657
chr17 48229349 48229363 GLIS2 JASPAR yes 21253658
chr17 48229349 48229363 GLIS3 JASPAR yes 21253659
chr17 48229393 48229404 TBX20 JASPAR yes 21253660
chr17 48229393 48229404 TBX2 JASPAR yes 21253661
chr17 48229394 48229402 MGA JASPAR yes 21253662
chr17 48229394 48229402 TBX15 JASPAR yes 21253663
chr17 48229394 48229402 TBX1 JASPAR yes 21253664
chr17 48229394 48229402 TBX4 JASPAR yes 21253665
chr17 48229394 48229402 TBX5 JASPAR yes 21253666
chr17 48229404 48229425 REST JASPAR yes 21253667
chr17 48229405 48229424 REST JASPAR yes 21253668
chr17 48229406 48229411 SP1 TRANSFAC yes 21253669
chr17 48229418 48229435 ESR1 JASPAR yes 21253670
chr17 48229418 48229436 ESR2 JASPAR yes 21253671
chr17 48229419 48229439 ESR1 JASPAR yes 21253672
chr17 48229420 48229424 H4TF2 TRANSFAC yes 21253673
chr17 48229424 48229433 ZEB1 JASPAR yes 21253674
chr17 48229436 48229447 FOXH1 JASPAR yes 21253675
chr17 48229461 48229478 NR3C1 JASPAR yes 21253676
chr17 48229502 48229508 SOX10 JASPAR yes 21253677
chr17 48229509 48229519 ZNF740 JASPAR yes 21253678
chr17 48229511 48229532 ZNF263 JASPAR yes 21253679
chr17 48229519 48229531 NHLH1 JASPAR yes 21253680
chr17 48229520 48229530 NHLH1 JASPAR yes 21253681
chr17 48229525 48229536 ELK4 JASPAR yes 21253682
chr17 48229525 48229536 FLI1 JASPAR yes 21253683
chr17 48229526 48229539 ELF1 JASPAR yes 21253684
chr17 48229560 48229581 ZNF263 JASPAR yes 21253685
chr17 48229561 48229582 ZNF263 JASPAR yes 21253686
chr17 48229562 48229572 SP1 JASPAR yes 21253687
chr17 48229563 48229584 ZNF263 JASPAR yes 21253688
chr17 48229564 48229585 ZNF263 JASPAR yes 21253689
chr17 48229565 48229576 E2F4 JASPAR yes 21253690
chr17 48229566 48229587 ZNF263 JASPAR yes 21253691
chr17 48229568 48229574 SP1 TRANSFAC yes 21253692
chr17 48229568 48229578 SP1 JASPAR yes 21253693
chr17 48229570 48229575 SP1 TRANSFAC yes 21253694
chr17 48229571 48229586 NR2C2 JASPAR yes 21253695
chr17 48229572 48229593 ZNF263 JASPAR yes 21253696
chr17 48229573 48229594 ZNF263 JASPAR yes 21253697
chr17 48229576 48229597 ZNF263 JASPAR yes 21253698
chr17 48229577 48229587 MZF1 JASPAR yes 21253699
chr17 48229578 48229599 ZNF263 JASPAR yes 21253700
chr17 48229579 48229600 ZNF263 JASPAR yes 21253701
chr17 48229580 48229586 SP1 TRANSFAC yes 21253702
chr17 48229582 48229603 ZNF263 JASPAR yes 21253703
chr17 48229585 48229606 ZNF263 JASPAR yes 21253704
chr17 48229590 48229603 ELF1 JASPAR yes 21253705
chr17 48229590 48229604 SPI1 JASPAR yes 21253706
chr17 48229591 48229612 ZNF263 JASPAR yes 21253707
chr17 48229594 48229615 ZNF263 JASPAR yes 21253708
chr17 48229604 48229614 GSC2 JASPAR yes 21253709
chr17 48229604 48229614 GSC JASPAR yes 21253710
SNP sites on vista25098[chr17:48228924-48229616]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48228981 rs847688 T C
GABPA H4TF2
4921092
chr17 48229038 rs182328077 C T
GABPA NFKB1
4921093
chr17 48229054 rs140322011 C A
GABPA
4921094
chr17 48229074 rs112842682 C CGTTTA
GABPA
4921095
chr17 48229074 rs60529412 C CGTTTA
GABPA
4921096
chr17 48229157 rs61541934 C T
EHF ELF3 ELF4 ELF5 ELK1 ELK3 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV5 FEV FLI1 GABPA SPI1 SPIC
4921097
chr17 48229273 rs538466049 G T
GABPA RREB1 SP1 ZNF263 ZNF740
4921098
chr17 48229441 rs847687 T G
ELF1 FOSL1 FOXH1 GABPA MAZ RUNX3 ZNF143 ZNF263
4921099
Genes possibly regulated by vista25098[chr17:48228924-48229616]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48133332 48167845 + ITGA3 ENSG00000005884.13 48133332 0.93 1.0 16024 4408
chr17 48172101 48189516 + PDK2 ENSG00000005882.7 48172101 0.81 1.0 16025 43177
chr17 48187404 48207246 - SAMD14 ENSG00000167100.10 48207246 0.88 1.0 16026 78322
chr17 48211104 48227991 - PPP1R9B ENSG00000108819.9 48227991 0.74 1.0 16027 99067
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 0.88 1.0 16028 88041
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 0.95 0.99 16029 50623
Expression level of Genes
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miRNAs possibly regulated by vista25098[chr17:48228924-48229616]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results