EnhancerDB
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  3. vista25101[chr17:48280500-48280887]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25101[chr17:48280500-48280887]
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Tissue distribution of vista25101
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Transcription factor that possibly regulate vista25101[chr17:48280500-48280887]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48280497 48280508 E2F6 JASPAR yes 21253826
chr17 48280497 48280508 E2F6 JASPAR yes 54686152
chr17 48280497 48280518 ZNF263 JASPAR yes 21253827
chr17 48280497 48280518 ZNF263 JASPAR yes 54686153
chr17 48280515 48280521 MZF1 JASPAR yes 21253828
chr17 48280515 48280521 MZF1 JASPAR yes 54686154
chr17 48280548 48280558 SP1 JASPAR yes 21253829
chr17 48280548 48280558 SP1 JASPAR yes 54686155
chr17 48280554 48280564 NFKB1 JASPAR yes 21253830
chr17 48280554 48280564 NFKB1 JASPAR yes 54686156
chr17 48280554 48280565 NFKB1 JASPAR yes 21253831
chr17 48280554 48280565 NFKB1 JASPAR yes 54686157
chr17 48280563 48280573 SP1 JASPAR yes 21253832
chr17 48280563 48280573 SP1 JASPAR yes 54686158
chr17 48280566 48280578 INSM1 JASPAR yes 21253833
chr17 48280566 48280578 INSM1 JASPAR yes 54686159
chr17 48280593 48280614 ZNF263 JASPAR yes 21253834
chr17 48280593 48280614 ZNF263 JASPAR yes 54686160
chr17 48280595 48280616 ZNF263 JASPAR yes 21253835
chr17 48280595 48280616 ZNF263 JASPAR yes 54686161
chr17 48280598 48280607 SP1 TRANSFAC yes 21253836
chr17 48280598 48280607 SP1 TRANSFAC yes 54686162
chr17 48280599 48280605 SP1 TRANSFAC yes 21253837
chr17 48280599 48280605 SP1 TRANSFAC yes 54686163
chr17 48280599 48280609 SP1 JASPAR yes 21253838
chr17 48280599 48280609 SP1 JASPAR yes 54686164
chr17 48280600 48280607 SP1 TRANSFAC yes 21253839
chr17 48280600 48280607 SP1 TRANSFAC yes 54686165
chr17 48280601 48280606 SP1 TRANSFAC yes 21253840
chr17 48280601 48280606 SP1 TRANSFAC yes 54686166
chr17 48280601 48280607 SP1 TRANSFAC yes 21253841
chr17 48280601 48280607 SP1 TRANSFAC yes 54686167
chr17 48280604 48280625 ZNF263 JASPAR yes 21253842
chr17 48280604 48280625 ZNF263 JASPAR yes 54686168
chr17 48280613 48280618 SP1 TRANSFAC yes 21253843
chr17 48280613 48280618 SP1 TRANSFAC yes 54686169
chr17 48280615 48280625 SP1 JASPAR yes 21253844
chr17 48280615 48280625 SP1 JASPAR yes 54686170
chr17 48280615 48280634 CTCF JASPAR yes 21253845
chr17 48280615 48280634 CTCF JASPAR yes 54686171
chr17 48280621 48280633 NHLH1 JASPAR yes 21253846
chr17 48280621 48280633 NHLH1 JASPAR yes 54686172
chr17 48280622 48280632 TFAP4 JASPAR yes 21253847
chr17 48280622 48280632 TFAP4 JASPAR yes 54686173
chr17 48280622 48280634 TAL1 JASPAR yes 21253848
chr17 48280622 48280634 TAL1 JASPAR yes 54686174
chr17 48280642 48280656 PLAG1 JASPAR yes 21253849
chr17 48280642 48280656 PLAG1 JASPAR yes 54686175
chr17 48280642 48280663 ZNF263 JASPAR yes 21253850
chr17 48280642 48280663 ZNF263 JASPAR yes 54686176
chr17 48280646 48280660 SPIC JASPAR yes 21253851
chr17 48280646 48280660 SPIC JASPAR yes 54686177
chr17 48280648 48280669 IRF1 JASPAR yes 21253852
chr17 48280648 48280669 IRF1 JASPAR yes 54686178
chr17 48280649 48280664 FOXP1 JASPAR yes 21253853
chr17 48280649 48280664 FOXP1 JASPAR yes 54686179
chr17 48280656 48280670 SPI1 JASPAR yes 21253854
chr17 48280656 48280670 SPI1 JASPAR yes 54686180
chr17 48280656 48280671 STAT2 JASPAR yes 21253855
chr17 48280656 48280671 STAT2 JASPAR yes 54686181
chr17 48280657 48280678 ZNF263 JASPAR yes 21253856
chr17 48280657 48280678 ZNF263 JASPAR yes 54686182
chr17 48280660 48280681 ZNF263 JASPAR yes 21253857
chr17 48280660 48280681 ZNF263 JASPAR yes 54686183
chr17 48280661 48280666 ETS2 TRANSFAC yes 21253858
chr17 48280661 48280666 ETS2 TRANSFAC yes 54686184
chr17 48280673 48280679 MAZ TRANSFAC yes 21253859
chr17 48280673 48280679 MAZ TRANSFAC yes 54686185
chr17 48280673 48280684 E2F6 JASPAR yes 21253860
chr17 48280673 48280684 E2F6 JASPAR yes 54686186
chr17 48280678 48280692 XBP1 JASPAR yes 21253861
chr17 48280678 48280692 XBP1 JASPAR yes 54686187
chr17 48280679 48280693 CREB3 JASPAR yes 21253862
chr17 48280679 48280693 CREB3L1 JASPAR yes 21253863
chr17 48280679 48280693 CREB3 JASPAR yes 54686188
chr17 48280679 48280693 CREB3L1 JASPAR yes 54686189
chr17 48280700 48280712 TFAP2C JASPAR yes 21253864
chr17 48280700 48280712 TFAP2C JASPAR yes 54686190
chr17 48280707 48280711 LFA1 TRANSFAC yes 21253865
chr17 48280707 48280711 LFA1 TRANSFAC yes 54686191
chr17 48280724 48280734 GCM2 JASPAR yes 21253866
chr17 48280724 48280734 GCM2 JASPAR yes 54686192
chr17 48280724 48280735 GCM1 JASPAR yes 21253867
chr17 48280724 48280735 GCM1 JASPAR yes 54686193
chr17 48280730 48280735 SP1 TRANSFAC yes 21253868
chr17 48280730 48280735 SP1 TRANSFAC yes 54686194
chr17 48280732 48280751 PAX5 JASPAR yes 21253869
chr17 48280732 48280751 PAX5 JASPAR yes 54686195
chr17 48280733 48280752 CTCF JASPAR yes 21253870
chr17 48280733 48280752 CTCF JASPAR yes 54686196
chr17 48280734 48280738 LFA1 TRANSFAC yes 21253871
chr17 48280734 48280738 LFA1 TRANSFAC yes 54686197
chr17 48280757 48280764 GATA1 TRANSFAC yes 21253872
chr17 48280757 48280764 GATA1 TRANSFAC yes 54686198
chr17 48280758 48280770 MEF2A JASPAR yes 21253873
chr17 48280758 48280770 MEF2B JASPAR yes 21253874
chr17 48280758 48280770 MEF2D JASPAR yes 21253875
chr17 48280758 48280770 MEF2A JASPAR yes 54686199
chr17 48280758 48280770 MEF2B JASPAR yes 54686200
chr17 48280758 48280770 MEF2D JASPAR yes 54686201
chr17 48280759 48280769 MEF2A JASPAR yes 21253876
chr17 48280759 48280769 MEF2A JASPAR yes 54686202
chr17 48280760 48280764 TEAD2 TRANSFAC yes 21253877
chr17 48280760 48280764 TEAD2 TRANSFAC yes 54686203
chr17 48280760 48280770 ALX3 JASPAR yes 21253878
chr17 48280760 48280770 GSX2 JASPAR yes 21253879
chr17 48280760 48280770 MNX1 JASPAR yes 21253880
chr17 48280760 48280770 ALX3 JASPAR yes 54686204
chr17 48280760 48280770 GSX2 JASPAR yes 54686205
chr17 48280760 48280770 MNX1 JASPAR yes 54686206
chr17 48280761 48280769 LMX1A JASPAR yes 21253881
chr17 48280761 48280769 LMX1B JASPAR yes 21253882
chr17 48280761 48280769 NKX6-1 JASPAR yes 21253883
chr17 48280761 48280769 NKX6-2 JASPAR yes 21253884
chr17 48280761 48280769 VAX1 JASPAR yes 21253885
chr17 48280761 48280769 VAX2 JASPAR yes 21253886
chr17 48280761 48280769 VSX1 JASPAR yes 21253887
chr17 48280761 48280769 VSX2 JASPAR yes 21253888
chr17 48280761 48280769 LMX1A JASPAR yes 54686207
chr17 48280761 48280769 LMX1B JASPAR yes 54686208
chr17 48280761 48280769 NKX6-1 JASPAR yes 54686209
chr17 48280761 48280769 NKX6-2 JASPAR yes 54686210
chr17 48280761 48280769 VAX1 JASPAR yes 54686211
chr17 48280761 48280769 VAX2 JASPAR yes 54686212
chr17 48280761 48280769 VSX1 JASPAR yes 54686213
chr17 48280761 48280769 VSX2 JASPAR yes 54686214
chr17 48280761 48280782 IRF1 JASPAR yes 21253889
chr17 48280761 48280782 IRF1 JASPAR yes 54686215
chr17 48280765 48280780 PRDM1 JASPAR yes 21253890
chr17 48280765 48280780 PRDM1 JASPAR yes 54686216
chr17 48280829 48280839 PAX3 JASPAR yes 21253891
chr17 48280829 48280839 PAX7 JASPAR yes 21253892
chr17 48280829 48280839 PAX3 JASPAR yes 54686217
chr17 48280829 48280839 PAX7 JASPAR yes 54686218
chr17 48280831 48280841 HESX1 JASPAR yes 21253893
chr17 48280831 48280841 HESX1 JASPAR yes 54686219
chr17 48280837 48280842 GATA2 JASPAR yes 21253894
chr17 48280837 48280842 GATA2 JASPAR yes 54686220
chr17 48280842 48280856 CREB3L1 JASPAR yes 21253895
chr17 48280842 48280856 CREB3L1 JASPAR yes 54686221
chr17 48280844 48280854 NEUROD2 JASPAR yes 21253896
chr17 48280844 48280854 NEUROD2 JASPAR yes 54686222
chr17 48280844 48280855 USF2 JASPAR yes 21253897
chr17 48280844 48280855 USF2 JASPAR yes 54686223
chr17 48280845 48280855 MAX JASPAR yes 21253898
chr17 48280845 48280855 MAX JASPAR yes 54686224
chr17 48280854 48280869 SCRT1 JASPAR yes 21253899
chr17 48280854 48280869 SCRT1 JASPAR yes 54686225
chr17 48280869 48280882 NFKB2 JASPAR yes 21253900
chr17 48280869 48280882 NFKB2 JASPAR yes 54686226
chr17 48280874 48280880 NFE2 TRANSFAC yes 21253901
chr17 48280874 48280880 NFE2 TRANSFAC yes 54686227
chr17 48280878 48280884 SP1 TRANSFAC yes 21253902
chr17 48280878 48280884 SP1 TRANSFAC yes 54686228
SNP sites on vista25101[chr17:48280500-48280887]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48280540 rs187653146 T G no 4921518
chr17 48280573 rs534823075 C A
INSM1 SP1
4921519
chr17 48280603 rs555018883 C G,T
SP1 ZNF263
4921520
chr17 48280655 rs11327935 GA G
FOXP1 IRF1 PLAG1 SPIC ZNF263
4921521
chr17 48280697 rs559123196 C T no 4921522
chr17 48280774 rs150038058 A C
IRF1 PRDM1
4921523
Genes possibly regulated by vista25101[chr17:48280500-48280887]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48187404 48207246 - SAMD14 ENSG00000167100.10 48207246 0.88 1.0 16026 26746
chr17 48211104 48227991 - PPP1R9B ENSG00000108819.9 48227991 0.74 1.0 16027 47491
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 0.88 1.0 16028 61075
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 0.95 0.99 16029 98493
chr17 48348767 48358844 + TMEM92 ENSG00000167105.3 48348767 0.95 1.0 16030 32120
Expression level of Genes
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miRNAs possibly regulated by vista25101[chr17:48280500-48280887]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results