EnhancerDB
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  3. vista25108[chr17:48299652-48299873]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25108[chr17:48299652-48299873]
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Tissue distribution of vista25108
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Transcription factor that possibly regulate vista25108[chr17:48299652-48299873]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48299656 48299665 NKX2-8 JASPAR yes 21254154
chr17 48299656 48299665 NKX2-8 JASPAR yes 54688860
chr17 48299656 48299666 NKX2-3 JASPAR yes 21254155
chr17 48299656 48299666 NKX2-3 JASPAR yes 54688861
chr17 48299681 48299686 SP1 TRANSFAC yes 21254156
chr17 48299681 48299686 SP1 TRANSFAC yes 54688862
chr17 48299699 48299714 TFAP2A JASPAR yes 21254157
chr17 48299699 48299714 TFAP2C JASPAR yes 21254158
chr17 48299699 48299714 TFAP2A JASPAR yes 54688863
chr17 48299699 48299714 TFAP2C JASPAR yes 54688864
chr17 48299710 48299720 NFIA JASPAR yes 21254159
chr17 48299710 48299720 NFIA JASPAR yes 54688865
chr17 48299712 48299718 NFIC JASPAR yes 21254160
chr17 48299712 48299718 NFIC JASPAR yes 54688866
chr17 48299720 48299733 SMAD2 JASPAR yes 21254161
chr17 48299720 48299733 SMAD2 JASPAR yes 54688867
chr17 48299740 48299746 MZF1 JASPAR yes 21254162
chr17 48299740 48299746 MZF1 JASPAR yes 54688868
chr17 48299746 48299760 PLAG1 JASPAR yes 21254163
chr17 48299746 48299760 PLAG1 JASPAR yes 54688869
chr17 48299782 48299793 NFKB1 JASPAR yes 21254164
chr17 48299782 48299793 NFKB1 JASPAR yes 54688870
chr17 48299783 48299792 NF-kappaB TRANSFAC yes 21254165
chr17 48299783 48299792 NF-kappaB TRANSFAC yes 54688871
chr17 48299786 48299794 FEV JASPAR yes 21254166
chr17 48299786 48299794 FEV JASPAR yes 54688872
chr17 48299786 48299797 CEBPA JASPAR yes 21254167
chr17 48299786 48299797 CEBPA JASPAR yes 54688873
chr17 48299790 48299802 MEF2A JASPAR yes 21254168
chr17 48299790 48299802 MEF2B JASPAR yes 21254169
chr17 48299790 48299802 MEF2D JASPAR yes 21254170
chr17 48299790 48299802 MEF2A JASPAR yes 54688874
chr17 48299790 48299802 MEF2B JASPAR yes 54688875
chr17 48299790 48299802 MEF2D JASPAR yes 54688876
chr17 48299791 48299801 MEF2A JASPAR yes 21254171
chr17 48299791 48299801 MEF2A JASPAR yes 54688877
chr17 48299795 48299806 FOS JASPAR yes 21254172
chr17 48299795 48299806 FOS JASPAR yes 54688878
chr17 48299796 48299805 JDP2 JASPAR yes 21254173
chr17 48299796 48299805 JDP2 JASPAR yes 54688879
chr17 48299796 48299810 JUN JASPAR yes 21254174
chr17 48299796 48299810 JUN JASPAR yes 54688880
chr17 48299808 48299822 IRF8 JASPAR yes 21254175
chr17 48299808 48299822 IRF8 JASPAR yes 54688881
chr17 48299813 48299818 MYC TRANSFAC yes 21254176
chr17 48299813 48299818 MYC TRANSFAC yes 54688882
chr17 48299820 48299831 FOXA1 JASPAR yes 21254177
chr17 48299820 48299831 FOXA1 JASPAR yes 54688883
chr17 48299821 48299830 NFIX JASPAR yes 21254178
chr17 48299821 48299830 NFIX JASPAR yes 54688884
chr17 48299821 48299831 NFIA JASPAR yes 21254179
chr17 48299821 48299831 NFIA JASPAR yes 54688885
chr17 48299823 48299829 NFIC JASPAR yes 21254180
chr17 48299823 48299829 NFIC JASPAR yes 54688886
chr17 48299837 48299843 TCF1 TRANSFAC yes 21254181
chr17 48299837 48299843 TCF1 TRANSFAC yes 54688887
chr17 48299852 48299867 IRF9 JASPAR yes 21254182
chr17 48299852 48299867 IRF9 JASPAR yes 54688888
chr17 48299853 48299867 IRF7 JASPAR yes 21254183
chr17 48299853 48299867 IRF7 JASPAR yes 54688889
chr17 48299867 48299871 YY1 TRANSFAC yes 21254184
chr17 48299867 48299871 YY1 TRANSFAC yes 54688890
SNP sites on vista25108[chr17:48299652-48299873]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48299677 rs559588478 G A no 4921762
Genes possibly regulated by vista25108[chr17:48299652-48299873]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48187404 48207246 - SAMD14 ENSG00000167100.10 48207246 0.88 1.0 16026 7594
chr17 48211104 48227991 - PPP1R9B ENSG00000108819.9 48227991 0.74 1.0 16027 28339
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 0.88 1.0 16028 41923
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 0.95 0.99 16029 79341
chr17 48348767 48358844 + TMEM92 ENSG00000167105.3 48348767 0.95 1.0 16030 51106
Expression level of Genes
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miRNAs possibly regulated by vista25108[chr17:48299652-48299873]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results