EnhancerDB
  1. Home
  2. Enhancers
  3. vista25109[chr17:48338432-48338651]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25109[chr17:48338432-48338651]
Back to top
Tissue distribution of vista25109
Back to top
Transcription factor that possibly regulate vista25109[chr17:48338432-48338651]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48338422 48338436 POU1F1 JASPAR yes 21254185
chr17 48338422 48338436 POU1F1 JASPAR yes 54690680
chr17 48338461 48338469 MEIS2 JASPAR yes 21254186
chr17 48338461 48338469 MEIS3 JASPAR yes 21254187
chr17 48338461 48338469 MEIS2 JASPAR yes 54690682
chr17 48338461 48338469 MEIS3 JASPAR yes 54690683
chr17 48338467 48338486 REST JASPAR yes 21254188
chr17 48338467 48338486 REST JASPAR yes 54690684
chr17 48338475 48338480 ETS2 TRANSFAC yes 21254189
chr17 48338475 48338480 ETS2 TRANSFAC yes 54690685
chr17 48338501 48338509 MGA JASPAR yes 21254190
chr17 48338501 48338509 MGA JASPAR yes 54690686
chr17 48338501 48338511 TBR1 JASPAR yes 21254191
chr17 48338501 48338511 TBR1 JASPAR yes 54690687
chr17 48338528 48338544 GLIS1 JASPAR yes 21254192
chr17 48338528 48338544 GLIS1 JASPAR yes 54690688
chr17 48338547 48338568 ZNF263 JASPAR yes 21254193
chr17 48338547 48338568 ZNF263 JASPAR yes 54690689
chr17 48338558 48338564 PEA3 TRANSFAC yes 21254194
chr17 48338558 48338564 PEA3 TRANSFAC yes 54690690
chr17 48338558 48338579 ZNF263 JASPAR yes 21254195
chr17 48338558 48338579 ZNF263 JASPAR yes 54690691
chr17 48338564 48338585 ZNF263 JASPAR yes 21254196
chr17 48338564 48338585 ZNF263 JASPAR yes 54690692
chr17 48338571 48338586 NR2C2 JASPAR yes 21254197
chr17 48338571 48338586 NR2C2 JASPAR yes 54690693
chr17 48338574 48338578 LFA1 TRANSFAC yes 21254198
chr17 48338574 48338578 LFA1 TRANSFAC yes 54690694
chr17 48338589 48338593 YY1 TRANSFAC yes 21254199
chr17 48338589 48338593 YY1 TRANSFAC yes 54690695
chr17 48338611 48338632 REST JASPAR yes 21254200
chr17 48338611 48338632 REST JASPAR yes 54690696
chr17 48338612 48338627 RFX5 JASPAR yes 21254201
chr17 48338612 48338627 RFX5 JASPAR yes 54690697
chr17 48338616 48338627 TFAP2A JASPAR yes 21254202
chr17 48338616 48338627 TFAP2B JASPAR yes 21254203
chr17 48338616 48338627 TFAP2C JASPAR yes 21254204
chr17 48338616 48338627 TFAP2A JASPAR yes 54690698
chr17 48338616 48338627 TFAP2B JASPAR yes 54690699
chr17 48338616 48338627 TFAP2C JASPAR yes 54690700
chr17 48338617 48338626 TFAP2A JASPAR yes 21254205
chr17 48338617 48338626 TFAP2A JASPAR yes 54690701
chr17 48338622 48338626 LFA1 TRANSFAC yes 21254206
chr17 48338622 48338626 LFA1 TRANSFAC yes 54690702
chr17 48338638 48338648 ETV5 JASPAR yes 21254207
chr17 48338638 48338648 ETV5 JASPAR yes 54690703
chr17 48338644 48338663 CTCF JASPAR yes 21254208
chr17 48338644 48338663 CTCF JASPAR yes 54690704
chr17 48338645 48338657 TFAP2A JASPAR yes 21254209
chr17 48338645 48338657 TFAP2A JASPAR yes 54690705
chr17 48338649 48338660 E2F6 JASPAR yes 21254210
chr17 48338649 48338660 E2F6 JASPAR yes 54690706
SNP sites on vista25109[chr17:48338432-48338651]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48338475 rs75778645 C T
ETS2 REST
4921951
chr17 48338497 rs181991965 A G no 4921952
chr17 48338645 rs147726014 C T
CTCF ETV5 TFAP2A
4921953
Genes possibly regulated by vista25109[chr17:48338432-48338651]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 0.88 1.0 16028 3143
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 0.95 0.99 16029 40561
chr17 48348767 48358844 + TMEM92 ENSG00000167105.3 48348767 0.95 1.0 16030 89884
chr17 48423453 48440499 + XYLT2 ENSG00000015532.5 48423453 0.88 1.0 16031 15198
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25109[chr17:48338432-48338651]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results