EnhancerDB
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  3. vista25113[chr17:48421685-48421964]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25113[chr17:48421685-48421964]
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Tissue distribution of vista25113
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Transcription factor that possibly regulate vista25113[chr17:48421685-48421964]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48421693 48421705 POU2F1 JASPAR yes 21254347
chr17 48421693 48421706 POU3F3 JASPAR yes 21254348
chr17 48421693 48421707 POU1F1 JASPAR yes 21254349
chr17 48421694 48421706 POU3F1 JASPAR yes 21254350
chr17 48421694 48421706 POU3F2 JASPAR yes 21254351
chr17 48421720 48421725 SP1 TRANSFAC yes 21254352
chr17 48421729 48421749 PPARG JASPAR yes 21254353
chr17 48421732 48421753 IRF1 JASPAR yes 21254354
chr17 48421734 48421749 PRDM1 JASPAR yes 21254355
chr17 48421734 48421749 STAT2 JASPAR yes 21254356
chr17 48421736 48421748 IRF1 JASPAR yes 21254357
chr17 48421736 48421750 IRF7 JASPAR yes 21254358
chr17 48421736 48421751 IRF9 JASPAR yes 21254359
chr17 48421760 48421772 HNF1B JASPAR yes 21254360
chr17 48421771 48421782 NFIL3 JASPAR yes 21254361
chr17 48421772 48421784 DBP JASPAR yes 21254362
chr17 48421772 48421784 HLF JASPAR yes 21254363
chr17 48421772 48421784 TEF JASPAR yes 21254364
chr17 48421774 48421785 NFIL3 JASPAR yes 21254365
chr17 48421777 48421781 TEAD2 TRANSFAC yes 21254366
chr17 48421783 48421788 GATA2 JASPAR yes 21254367
chr17 48421783 48421795 FOXI1 JASPAR yes 21254368
chr17 48421786 48421790 YY1 TRANSFAC yes 21254369
chr17 48421786 48421797 HOXA10 JASPAR yes 21254370
chr17 48421787 48421796 CDX1 JASPAR yes 21254371
chr17 48421787 48421798 CDX2 JASPAR yes 21254372
chr17 48421792 48421799 NKX3-1 JASPAR yes 21254373
chr17 48421793 48421804 NFIL3 JASPAR yes 21254374
chr17 48421794 48421806 DBP JASPAR yes 21254375
chr17 48421794 48421806 HLF JASPAR yes 21254376
chr17 48421794 48421806 TEF JASPAR yes 21254377
chr17 48421796 48421807 NFIL3 JASPAR yes 21254378
chr17 48421799 48421803 TEAD2 TRANSFAC yes 21254379
chr17 48421818 48421834 SOX8 JASPAR yes 21254380
chr17 48421821 48421825 YY1 TRANSFAC yes 21254381
chr17 48421829 48421845 GLIS1 JASPAR yes 21254382
chr17 48421832 48421846 E2F7 JASPAR yes 21254383
chr17 48421834 48421844 ZNF740 JASPAR yes 21254384
chr17 48421840 48421857 BCL6B JASPAR yes 21254385
chr17 48421847 48421853 NFIC JASPAR yes 21254386
chr17 48421859 48421873 EBF1 JASPAR yes 21254387
chr17 48421861 48421872 EBF1 JASPAR yes 21254388
chr17 48421876 48421886 HOXC10 JASPAR yes 21254389
chr17 48421876 48421886 HOXD13 JASPAR yes 21254390
chr17 48421876 48421887 HOXC11 JASPAR yes 21254391
chr17 48421876 48421887 HOXC13 JASPAR yes 21254392
chr17 48421877 48421887 GSX2 JASPAR yes 21254393
chr17 48421878 48421886 NKX6-1 JASPAR yes 21254394
chr17 48421878 48421886 NKX6-2 JASPAR yes 21254395
chr17 48421878 48421888 POU6F2 JASPAR yes 21254396
chr17 48421889 48421903 ONECUT1 JASPAR yes 21254397
chr17 48421889 48421903 ONECUT2 JASPAR yes 21254398
chr17 48421889 48421903 ONECUT3 JASPAR yes 21254399
chr17 48421891 48421902 FOXC1 JASPAR yes 21254400
chr17 48421893 48421908 HNF1A JASPAR yes 21254401
chr17 48421894 48421907 HNF1B JASPAR yes 21254402
chr17 48421894 48421908 POU4F1 JASPAR yes 21254403
chr17 48421894 48421910 POU4F2 JASPAR yes 21254404
chr17 48421894 48421910 POU4F3 JASPAR yes 21254405
chr17 48421895 48421907 HNF1B JASPAR yes 21254406
chr17 48421898 48421909 FOXB1 JASPAR yes 21254407
chr17 48421898 48421909 PHOX2A JASPAR yes 21254408
chr17 48421898 48421909 PROP1 JASPAR yes 21254409
chr17 48421899 48421903 YY1 TRANSFAC yes 21254410
chr17 48421901 48421911 ALX3 JASPAR yes 21254411
chr17 48421901 48421911 ESX1 JASPAR yes 21254412
chr17 48421901 48421911 GSX2 JASPAR yes 21254413
chr17 48421901 48421911 HESX1 JASPAR yes 21254414
chr17 48421901 48421911 LHX6 JASPAR yes 21254415
chr17 48421901 48421911 MIXL1 JASPAR yes 21254416
chr17 48421901 48421911 MNX1 JASPAR yes 21254417
chr17 48421901 48421911 NOTO JASPAR yes 21254418
chr17 48421901 48421911 RAX JASPAR yes 21254419
chr17 48421902 48421910 ISX JASPAR yes 21254420
chr17 48421902 48421910 LMX1A JASPAR yes 21254421
chr17 48421902 48421910 LMX1B JASPAR yes 21254422
chr17 48421902 48421910 NKX6-1 JASPAR yes 21254423
chr17 48421902 48421910 NKX6-2 JASPAR yes 21254424
chr17 48421902 48421910 PRRX1 JASPAR yes 21254425
chr17 48421902 48421910 RAX2 JASPAR yes 21254426
chr17 48421902 48421910 SHOX JASPAR yes 21254427
chr17 48421902 48421910 UNCX JASPAR yes 21254428
chr17 48421902 48421910 VAX1 JASPAR yes 21254429
chr17 48421902 48421916 POU1F1 JASPAR yes 21254430
chr17 48421903 48421915 POU3F1 JASPAR yes 21254431
chr17 48421903 48421915 POU3F2 JASPAR yes 21254432
chr17 48421903 48421916 POU3F3 JASPAR yes 21254433
chr17 48421904 48421916 POU2F1 JASPAR yes 21254434
chr17 48421905 48421914 POU3F4 JASPAR yes 21254435
chr17 48421905 48421914 POU5F1B JASPAR yes 21254436
chr17 48421907 48421910 MYB TRANSFAC yes 21254437
chr17 48421937 48421945 FOXO3 JASPAR yes 21254438
chr17 48421939 48421946 NFATC2 JASPAR yes 21254439
chr17 48421951 48421956 MYB TRANSFAC yes 21254440
chr17 48421952 48421961 NKX2-8 JASPAR yes 21254441
SNP sites on vista25113[chr17:48421685-48421964]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48421701 rs187426217 T C
POU1F1 POU2F1 POU3F1 POU3F2 POU3F3
4922845
chr17 48421919 rs184984958 T C no 4922846
chr17 48421923 rs68095748 C T no 4922847
chr17 48421952 rs67180903 A G
MYB NKX2-8
4922848
Genes possibly regulated by vista25113[chr17:48421685-48421964]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48348767 48358844 + TMEM92 ENSG00000167105.3 48348767 0.95 1.0 16030 27082
chr17 48423453 48440499 + XYLT2 ENSG00000015532.5 48423453 0.88 1.0 16031 98511
chr17 48445218 48450575 - MRPL27 ENSG00000108826.11 48450575 0.84 0.99 16032 71389
chr17 48450581 48458844 + EME1 ENSG00000154920.10 48450581 0.95 1.0 16033 71383
chr17 48452420 48474914 - LRRC59 ENSG00000108829.9 48474914 0.71 1.0 16034 47050
chr17 48503519 48552206 + ACSF2 ENSG00000167107.8 48503519 0.83 1.0 16035 18445
Expression level of Genes
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miRNAs possibly regulated by vista25113[chr17:48421685-48421964]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results