EnhancerDB
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  3. vista25119[chr17:48716257-48716537]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25119[chr17:48716257-48716537]
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Tissue distribution of vista25119
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Transcription factor that possibly regulate vista25119[chr17:48716257-48716537]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48715944 48717134 EP300 UCSC Txn Factor no Conserved 108270930
chr17 48715944 48717134 EP300 UCSC Txn Factor no Conserved 108270931
chr17 48716241 48717110 TCF12 UCSC Txn Factor no Conserved 108270948
chr17 48716241 48717110 TCF12 UCSC Txn Factor no Conserved 108270949
chr17 48716472 48716911 TFAP2C UCSC Txn Factor no Conserved 108270978
chr17 48716472 48716911 TFAP2C UCSC Txn Factor no Conserved 108270979
chr17 48716499 48716891 TFAP2A UCSC Txn Factor no Conserved 108270984
chr17 48716499 48716891 TFAP2A UCSC Txn Factor no Conserved 108270985
chr17 48716520 48716950 FOSL2 UCSC Txn Factor no Conserved 108270990
chr17 48716520 48716950 FOSL2 UCSC Txn Factor no Conserved 108270991
chr17 48716261 48716272 CEBPA JASPAR yes 21254594
chr17 48716261 48716272 CEBPA JASPAR yes 54709837
chr17 48716263 48716281 SRF JASPAR yes 21254595
chr17 48716263 48716281 SRF JASPAR yes 54709838
chr17 48716266 48716270 H1TF2 TRANSFAC yes 21254596
chr17 48716266 48716270 NFE TRANSFAC yes 21254597
chr17 48716266 48716270 SRF TRANSFAC yes 21254598
chr17 48716266 48716270 H1TF2 TRANSFAC yes 54709839
chr17 48716266 48716270 NFE TRANSFAC yes 54709840
chr17 48716266 48716270 SRF TRANSFAC yes 54709841
chr17 48716283 48716294 TFAP2A JASPAR yes 21254599
chr17 48716283 48716294 TFAP2B JASPAR yes 21254600
chr17 48716283 48716294 TFAP2C JASPAR yes 21254601
chr17 48716283 48716294 TFAP2A JASPAR yes 54709842
chr17 48716283 48716294 TFAP2B JASPAR yes 54709843
chr17 48716283 48716294 TFAP2C JASPAR yes 54709844
chr17 48716290 48716302 INSM1 JASPAR yes 21254602
chr17 48716290 48716302 INSM1 JASPAR yes 54709845
chr17 48716294 48716309 NR2C2 JASPAR yes 21254603
chr17 48716294 48716309 NR2C2 JASPAR yes 54709846
chr17 48716304 48716321 PAX1 JASPAR yes 21254604
chr17 48716304 48716321 PAX9 JASPAR yes 21254605
chr17 48716304 48716321 PAX1 JASPAR yes 54709847
chr17 48716304 48716321 PAX9 JASPAR yes 54709848
chr17 48716325 48716331 TCF1 TRANSFAC yes 21254606
chr17 48716325 48716331 TCF1 TRANSFAC yes 54709849
chr17 48716325 48716332 TCF4 TRANSFAC yes 21254607
chr17 48716325 48716332 TCF4 TRANSFAC yes 54709850
chr17 48716387 48716401 JUN JASPAR yes 21254608
chr17 48716387 48716401 JUN JASPAR yes 54709851
chr17 48716389 48716400 BATF JASPAR yes 21254609
chr17 48716389 48716400 BATF JASPAR yes 54709852
chr17 48716390 48716401 JUNB JASPAR yes 21254610
chr17 48716390 48716401 JUNB JASPAR yes 54709853
chr17 48716391 48716402 JUND JASPAR yes 21254611
chr17 48716391 48716402 JUND JASPAR yes 54709854
chr17 48716392 48716401 JDP2 JASPAR yes 21254612
chr17 48716392 48716401 JDP2 JASPAR yes 54709855
chr17 48716393 48716399 JUN TRANSFAC yes 21254613
chr17 48716393 48716399 JUN TRANSFAC yes 54709856
chr17 48716401 48716405 LFA1 TRANSFAC yes 21254614
chr17 48716401 48716405 LFA1 TRANSFAC yes 54709857
chr17 48716415 48716421 NFIC JASPAR yes 21254615
chr17 48716415 48716421 NFIC JASPAR yes 54709858
chr17 48716417 48716421 H1TF2 TRANSFAC yes 21254616
chr17 48716417 48716421 NFE TRANSFAC yes 21254617
chr17 48716417 48716421 SRF TRANSFAC yes 21254618
chr17 48716417 48716421 H1TF2 TRANSFAC yes 54709859
chr17 48716417 48716421 NFE TRANSFAC yes 54709860
chr17 48716417 48716421 SRF TRANSFAC yes 54709861
chr17 48716423 48716427 YY1 TRANSFAC yes 21254619
chr17 48716423 48716427 YY1 TRANSFAC yes 54709862
chr17 48716424 48716435 BATF JASPAR yes 21254620
chr17 48716424 48716435 BATF JASPAR yes 54709863
chr17 48716463 48716468 TFAP2A TRANSFAC yes 21254621
chr17 48716463 48716468 TFAP2A TRANSFAC yes 54709864
chr17 48716463 48716469 MZF1 JASPAR yes 21254622
chr17 48716463 48716469 MZF1 JASPAR yes 54709865
chr17 48716465 48716470 ETS2 TRANSFAC yes 21254623
chr17 48716465 48716470 ETS2 TRANSFAC yes 54709866
chr17 48716466 48716487 ZNF263 JASPAR yes 21254624
chr17 48716466 48716487 ZNF263 JASPAR yes 54709867
chr17 48716471 48716485 GLIS3 JASPAR yes 21254625
chr17 48716471 48716485 GLIS3 JASPAR yes 54709868
chr17 48716477 48716490 SMAD2 JASPAR yes 21254626
chr17 48716477 48716490 SMAD2 JASPAR yes 54709869
chr17 48716507 48716527 ESR1 JASPAR yes 21254627
chr17 48716507 48716527 ESR1 JASPAR yes 54709870
chr17 48716510 48716528 ESR2 JASPAR yes 21254628
chr17 48716510 48716528 ESR2 JASPAR yes 54709871
SNP sites on vista25119[chr17:48716257-48716537]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48716316 rs60300548 A C
EP300 PAX1 PAX9 TCF12
4924346
chr17 48716337 rs185861995 G A
EP300 TCF12
4924347
chr17 48716394 rs532397877 T C
BATF EP300 JDP2 JUN JUNB JUND TCF12
4924348
chr17 48716448 rs114401727 G A
EP300 TCF12
4924349
chr17 48716460 rs140401440 T A,C
EP300 TCF12
4924350
chr17 48716495 rs150368673 C T
EP300 TCF12 TFAP2C
4924351
Genes possibly regulated by vista25119[chr17:48716257-48716537]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48620419 48633213 + SPATA20 ENSG00000006282.15 48620419 0.74 1.0 16040 4162
chr17 48638429 48704835 + CACNA1G ENSG00000006283.13 48638429 0.91 0.99 16041 22172
chr17 48712138 48769613 + ABCC3 ENSG00000108846.11 48712138 0.87 1.0 16042 95881
chr17 48770551 48785285 - ANKRD40 ENSG00000154945.6 48785285 0.58 0.99 16043 31252
chr17 48796905 48833574 + LUC7L3 ENSG00000108848.11 48796905 0.81 0.99 16044 19632
Expression level of Genes
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miRNAs possibly regulated by vista25119[chr17:48716257-48716537]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results