EnhancerDB
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  3. vista25120[chr17:48716691-48717083]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25120[chr17:48716691-48717083]
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Tissue distribution of vista25120
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Transcription factor that possibly regulate vista25120[chr17:48716691-48717083]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48715944 48717134 EP300 UCSC Txn Factor no Conserved 108270930
chr17 48715944 48717134 EP300 UCSC Txn Factor no Conserved 108270931
chr17 48716241 48717110 TCF12 UCSC Txn Factor no Conserved 108270948
chr17 48716241 48717110 TCF12 UCSC Txn Factor no Conserved 108270949
chr17 48716472 48716911 TFAP2C UCSC Txn Factor no Conserved 108270978
chr17 48716472 48716911 TFAP2C UCSC Txn Factor no Conserved 108270979
chr17 48716499 48716891 TFAP2A UCSC Txn Factor no Conserved 108270984
chr17 48716499 48716891 TFAP2A UCSC Txn Factor no Conserved 108270985
chr17 48716520 48716950 FOSL2 UCSC Txn Factor no Conserved 108270990
chr17 48716520 48716950 FOSL2 UCSC Txn Factor no Conserved 108270991
chr17 48716655 48716895 GABPA UCSC Txn Factor no Conserved 108271021
chr17 48716695 48716951 CEBPB UCSC Txn Factor no Conserved 108271036
chr17 48716682 48716703 ZNF263 JASPAR yes 21254629
chr17 48716682 48716703 ZNF263 JASPAR yes 54709891
chr17 48716686 48716699 ZBTB18 JASPAR yes 21254630
chr17 48716686 48716699 ZBTB18 JASPAR yes 54709892
chr17 48716700 48716710 NKX2-3 JASPAR yes 21254631
chr17 48716700 48716710 NKX2-3 JASPAR yes 54709893
chr17 48716701 48716710 NKX2-8 JASPAR yes 21254632
chr17 48716701 48716710 NKX2-8 JASPAR yes 54709894
chr17 48716704 48716713 ZEB1 JASPAR yes 21254633
chr17 48716704 48716713 ZEB1 JASPAR yes 54709895
chr17 48716707 48716712 USF2 TRANSFAC yes 21254634
chr17 48716707 48716712 USF2 TRANSFAC yes 54709896
chr17 48716719 48716734 TFAP2A JASPAR yes 21254635
chr17 48716719 48716734 TFAP2A JASPAR yes 54709897
chr17 48716720 48716724 H4TF2 TRANSFAC yes 21254636
chr17 48716720 48716724 H4TF2 TRANSFAC yes 54709898
chr17 48716721 48716736 TFAP2C JASPAR yes 21254637
chr17 48716721 48716736 TFAP2C JASPAR yes 54709899
chr17 48716744 48716757 ELF1 JASPAR yes 21254638
chr17 48716744 48716757 ELF1 JASPAR yes 54709900
chr17 48716745 48716750 ETS2 TRANSFAC yes 21254639
chr17 48716745 48716750 ETS2 TRANSFAC yes 54709901
chr17 48716747 48716758 FLI1 JASPAR yes 21254640
chr17 48716747 48716758 FLI1 JASPAR yes 54709902
chr17 48716747 48716768 ZNF263 JASPAR yes 21254641
chr17 48716747 48716768 ZNF263 JASPAR yes 54709903
chr17 48716748 48716753 ETS2 TRANSFAC yes 21254642
chr17 48716748 48716753 ETS2 TRANSFAC yes 54709904
chr17 48716748 48716756 FEV JASPAR yes 21254643
chr17 48716748 48716756 FEV JASPAR yes 54709905
chr17 48716749 48716756 SPI1 JASPAR yes 21254644
chr17 48716749 48716756 SPI1 JASPAR yes 54709906
chr17 48716749 48716763 JUN JASPAR yes 21254645
chr17 48716749 48716763 JUN JASPAR yes 54709907
chr17 48716752 48716763 FOSL2 JASPAR yes 21254646
chr17 48716752 48716763 JUNB JASPAR yes 21254647
chr17 48716752 48716763 FOSL2 JASPAR yes 54709908
chr17 48716752 48716763 JUNB JASPAR yes 54709909
chr17 48716753 48716764 FOS JASPAR yes 21254648
chr17 48716753 48716764 FOSL1 JASPAR yes 21254649
chr17 48716753 48716764 JUND JASPAR yes 21254650
chr17 48716753 48716764 FOS JASPAR yes 54709910
chr17 48716753 48716764 FOSL1 JASPAR yes 54709911
chr17 48716753 48716764 JUND JASPAR yes 54709912
chr17 48716755 48716762 JUN TRANSFAC yes 21254651
chr17 48716755 48716762 JUN TRANSFAC yes 54709913
chr17 48716762 48716767 ETS2 TRANSFAC yes 21254652
chr17 48716762 48716767 ETS2 TRANSFAC yes 54709914
chr17 48716776 48716787 E2F6 JASPAR yes 21254653
chr17 48716776 48716787 E2F6 JASPAR yes 54709915
chr17 48716788 48716794 NFIC JASPAR yes 21254654
chr17 48716788 48716794 NFIC JASPAR yes 54709916
chr17 48716806 48716812 MZF1 JASPAR yes 21254655
chr17 48716806 48716812 MZF1 JASPAR yes 54709917
chr17 48716837 48716841 LFA1 TRANSFAC yes 21254656
chr17 48716837 48716841 LFA1 TRANSFAC yes 54709918
chr17 48716851 48716857 PEA3 TRANSFAC yes 21254657
chr17 48716851 48716857 PEA3 TRANSFAC yes 54709919
chr17 48716852 48716860 EHF JASPAR yes 21254658
chr17 48716852 48716860 EHF JASPAR yes 54709920
chr17 48716860 48716870 NFIA JASPAR yes 21254659
chr17 48716860 48716870 NFIA JASPAR yes 54709921
chr17 48716862 48716868 NFIC JASPAR yes 21254660
chr17 48716862 48716868 NFIC JASPAR yes 54709922
chr17 48716873 48716885 NHLH1 JASPAR yes 21254661
chr17 48716873 48716885 NHLH1 JASPAR yes 54709923
chr17 48716874 48716884 TFAP4 JASPAR yes 21254662
chr17 48716874 48716884 TFAP4 JASPAR yes 54709924
chr17 48716879 48716890 FOSL2 JASPAR yes 21254663
chr17 48716879 48716890 FOSL2 JASPAR yes 54709925
chr17 48716936 48716940 LFA1 TRANSFAC yes 21254664
chr17 48716936 48716940 LFA1 TRANSFAC yes 54709926
chr17 48716942 48716956 EBF1 JASPAR yes 21254665
chr17 48716942 48716956 EBF1 JASPAR yes 54709927
chr17 48716944 48716955 EBF1 JASPAR yes 21254666
chr17 48716944 48716955 EBF1 JASPAR yes 54709928
chr17 48716948 48716953 TFAP2A TRANSFAC yes 21254667
chr17 48716948 48716953 TFAP2A TRANSFAC yes 54709929
chr17 48716948 48716954 MZF1 JASPAR yes 21254668
chr17 48716948 48716954 MZF1 JASPAR yes 54709930
chr17 48716988 48717006 ESR1 JASPAR yes 21254669
chr17 48716988 48717006 ESR1 JASPAR yes 54709931
chr17 48717001 48717007 SP1 TRANSFAC yes 21254670
chr17 48717001 48717007 SP1 TRANSFAC yes 54709932
chr17 48717001 48717011 SP1 JASPAR yes 21254671
chr17 48717001 48717011 SP1 JASPAR yes 54709933
chr17 48717021 48717042 IRF1 JASPAR yes 21254672
chr17 48717021 48717042 IRF1 JASPAR yes 54709934
chr17 48717023 48717038 STAT2 JASPAR yes 21254673
chr17 48717023 48717038 STAT2 JASPAR yes 54709935
chr17 48717024 48717038 STAT1 JASPAR yes 21254674
chr17 48717024 48717038 STAT1 JASPAR yes 54709936
chr17 48717025 48717039 IRF7 JASPAR yes 21254675
chr17 48717025 48717039 IRF8 JASPAR yes 21254676
chr17 48717025 48717039 IRF7 JASPAR yes 54709937
chr17 48717025 48717039 IRF8 JASPAR yes 54709938
chr17 48717025 48717040 IRF9 JASPAR yes 21254677
chr17 48717025 48717040 IRF9 JASPAR yes 54709939
chr17 48717026 48717047 REST JASPAR yes 21254678
chr17 48717026 48717047 REST JASPAR yes 54709940
chr17 48717028 48717043 MEF2C JASPAR yes 21254679
chr17 48717028 48717043 MEF2C JASPAR yes 54709941
chr17 48717063 48717075 INSM1 JASPAR yes 21254680
chr17 48717063 48717075 INSM1 JASPAR yes 54709942
chr17 48717067 48717082 NR2C2 JASPAR yes 21254681
chr17 48717067 48717082 NR2C2 JASPAR yes 54709943
chr17 48717068 48717078 SP1 JASPAR yes 21254682
chr17 48717068 48717078 SP1 JASPAR yes 54709944
chr17 48717069 48717079 SP1 JASPAR yes 21254683
chr17 48717069 48717079 SP1 JASPAR yes 54709945
chr17 48717069 48717090 ZNF263 JASPAR yes 21254684
chr17 48717069 48717090 ZNF263 JASPAR yes 54709946
chr17 48717070 48717074 LFA1 TRANSFAC yes 21254685
chr17 48717070 48717074 LFA1 TRANSFAC yes 54709947
chr17 48717076 48717081 SP1 TRANSFAC yes 21254686
chr17 48717076 48717081 SP1 TRANSFAC yes 54709948
chr17 48717080 48717085 GATA2 JASPAR yes 21254687
chr17 48717080 48717085 GATA2 JASPAR yes 54709949
SNP sites on vista25120[chr17:48716691-48717083]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48716703 rs117303693 C T
CEBPB EP300 FOSL2 GABPA NKX2-3 NKX2-8 TCF12 TFAP2A TFAP2C ZNF263
4924352
chr17 48716720 rs1548529 A G
CEBPB EP300 FOSL2 GABPA H4TF2 TCF12 TFAP2A TFAP2C
4924353
chr17 48716801 rs142153760 C G
CEBPB EP300 FOSL2 GABPA TCF12 TFAP2A TFAP2C
4924354
chr17 48716819 rs4148408 G A
CEBPB EP300 FOSL2 GABPA TCF12 TFAP2A TFAP2C
4924355
chr17 48717002 rs532036132 C A
EP300 ESR1 SP1 TCF12
4924356
chr17 48717082 rs7224691 G C
EP300 GATA2 NR2C2 TCF12 ZNF263
4924357
Genes possibly regulated by vista25120[chr17:48716691-48717083]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48620419 48633213 + SPATA20 ENSG00000006282.15 48620419 0.74 1.0 16040 3728
chr17 48638429 48704835 + CACNA1G ENSG00000006283.13 48638429 0.91 0.99 16041 21738
chr17 48712138 48769613 + ABCC3 ENSG00000108846.11 48712138 0.87 1.0 16042 95447
chr17 48770551 48785285 - ANKRD40 ENSG00000154945.6 48785285 0.58 0.99 16043 31798
chr17 48796905 48833574 + LUC7L3 ENSG00000108848.11 48796905 0.81 0.99 16044 20178
Expression level of Genes
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miRNAs possibly regulated by vista25120[chr17:48716691-48717083]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results