EnhancerDB
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  3. vista25121[chr17:48726648-48726741]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25121[chr17:48726648-48726741]
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Tissue distribution of vista25121
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Transcription factor that possibly regulate vista25121[chr17:48726648-48726741]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48726607 48726833 SRF UCSC Txn Factor no Conserved 108271059
chr17 48726651 48726672 IRF1 JASPAR yes 21254688
chr17 48726651 48726672 IRF1 JASPAR yes 54711276
chr17 48726655 48726670 PRDM1 JASPAR yes 21254689
chr17 48726655 48726670 PRDM1 JASPAR yes 54711277
chr17 48726655 48726673 IRF2 JASPAR yes 21254690
chr17 48726655 48726673 IRF2 JASPAR yes 54711278
chr17 48726664 48726669 ETS2 TRANSFAC yes 21254691
chr17 48726664 48726669 ETS2 TRANSFAC yes 54711279
chr17 48726690 48726695 NFY TRANSFAC yes 21254692
chr17 48726690 48726695 NFY TRANSFAC yes 54711280
chr17 48726707 48726711 YY1 TRANSFAC yes 21254693
chr17 48726707 48726711 YY1 TRANSFAC yes 54711281
chr17 48726708 48726726 SRF JASPAR yes 21254694
chr17 48726708 48726726 SRF JASPAR yes 54711282
chr17 48726710 48726726 SRF JASPAR yes 21254695
chr17 48726710 48726726 SRF JASPAR yes 54711283
chr17 48726710 48726728 SRF JASPAR yes 21254696
chr17 48726710 48726728 SRF JASPAR yes 54711284
chr17 48726711 48726723 SRF JASPAR yes 21254697
chr17 48726711 48726723 SRF JASPAR yes 54711285
chr17 48726713 48726725 SRF JASPAR yes 21254698
chr17 48726713 48726725 SRF JASPAR yes 54711286
chr17 48726716 48726720 YY1 TRANSFAC yes 21254699
chr17 48726716 48726720 YY1 TRANSFAC yes 54711287
chr17 48726720 48726730 SP1 JASPAR yes 21254700
chr17 48726720 48726730 SP1 JASPAR yes 54711288
chr17 48726721 48726725 LFA1 TRANSFAC yes 21254701
chr17 48726721 48726725 LFA1 TRANSFAC yes 54711289
chr17 48726724 48726735 CEBPA JASPAR yes 21254702
chr17 48726724 48726735 CEBPA JASPAR yes 54711290
chr17 48726725 48726736 CEBPB JASPAR yes 21254703
chr17 48726725 48726736 CEBPB JASPAR yes 54711291
chr17 48726735 48726750 FOXA1 JASPAR yes 21254704
chr17 48726735 48726750 FOXA1 JASPAR yes 54711292
chr17 48726739 48726750 FOXA1 JASPAR yes 21254705
chr17 48726739 48726750 FOXA1 JASPAR yes 54711293
chr17 48726740 48726758 SRF JASPAR yes 21254706
chr17 48726740 48726758 SRF JASPAR yes 54711294
SNP sites on vista25121[chr17:48726648-48726741]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista25121[chr17:48726648-48726741]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48638429 48704835 + CACNA1G ENSG00000006283.13 48638429 0.91 0.99 16041 11781
chr17 48712138 48769613 + ABCC3 ENSG00000108846.11 48712138 0.87 1.0 16042 85490
chr17 48770551 48785285 - ANKRD40 ENSG00000154945.6 48785285 0.58 0.99 16043 41456
chr17 48796905 48833574 + LUC7L3 ENSG00000108848.11 48796905 0.81 0.99 16044 29836
Expression level of Genes
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miRNAs possibly regulated by vista25121[chr17:48726648-48726741]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results