EnhancerDB
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  3. vista25122[chr17:48870441-48870661]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25122[chr17:48870441-48870661]
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Tissue distribution of vista25122
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Transcription factor that possibly regulate vista25122[chr17:48870441-48870661]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48870445 48870450 SP1 TRANSFAC yes 21254707
chr17 48870445 48870450 SP1 TRANSFAC yes 54720849
chr17 48870449 48870460 NFKB1 JASPAR yes 21254708
chr17 48870449 48870460 NFKB1 JASPAR yes 54720850
chr17 48870463 48870472 ZEB1 JASPAR yes 21254709
chr17 48870463 48870472 ZEB1 JASPAR yes 54720851
chr17 48870464 48870474 TCF4 JASPAR yes 21254710
chr17 48870464 48870474 TCF4 JASPAR yes 54720852
chr17 48870466 48870471 USF2 TRANSFAC yes 21254711
chr17 48870466 48870471 USF2 TRANSFAC yes 54720853
chr17 48870475 48870486 DUX4 JASPAR yes 21254712
chr17 48870475 48870486 DUX4 JASPAR yes 54720854
chr17 48870476 48870489 ATF4 JASPAR yes 21254713
chr17 48870476 48870489 ATF4 JASPAR yes 54720855
chr17 48870476 48870491 JUND JASPAR yes 21254714
chr17 48870476 48870491 JUND JASPAR yes 54720856
chr17 48870477 48870490 JUN JASPAR yes 21254715
chr17 48870477 48870490 JUN JASPAR yes 54720857
chr17 48870488 48870496 MEIS2 JASPAR yes 21254716
chr17 48870488 48870496 MEIS3 JASPAR yes 21254717
chr17 48870488 48870496 MEIS2 JASPAR yes 54720858
chr17 48870488 48870496 MEIS3 JASPAR yes 54720859
chr17 48870489 48870493 NFE TRANSFAC yes 21254718
chr17 48870489 48870493 NFE TRANSFAC yes 54720860
chr17 48870512 48870533 ZNF263 JASPAR yes 21254719
chr17 48870512 48870533 ZNF263 JASPAR yes 54720861
chr17 48870536 48870543 PEA3 TRANSFAC yes 21254720
chr17 48870536 48870543 PEA3 TRANSFAC yes 54720862
chr17 48870544 48870561 RARA JASPAR yes 21254721
chr17 48870544 48870561 RXRA JASPAR yes 21254722
chr17 48870544 48870561 RARA JASPAR yes 54720863
chr17 48870544 48870561 RXRA JASPAR yes 54720864
chr17 48870559 48870563 NFE TRANSFAC yes 21254723
chr17 48870559 48870563 NFE TRANSFAC yes 54720865
chr17 48870559 48870564 GATA1 TRANSFAC yes 21254724
chr17 48870559 48870564 GATA1 TRANSFAC yes 54720866
chr17 48870559 48870565 GATA3 JASPAR yes 21254725
chr17 48870559 48870565 GATA3 JASPAR yes 54720867
chr17 48870578 48870591 ELF1 JASPAR yes 21254726
chr17 48870578 48870591 ELF1 JASPAR yes 54720868
chr17 48870579 48870589 ELK1 JASPAR yes 21254727
chr17 48870579 48870589 ELK1 JASPAR yes 54720869
chr17 48870579 48870591 EHF JASPAR yes 21254728
chr17 48870579 48870591 ELF1 JASPAR yes 21254729
chr17 48870579 48870591 ELF4 JASPAR yes 21254730
chr17 48870579 48870591 EHF JASPAR yes 54720870
chr17 48870579 48870591 ELF1 JASPAR yes 54720871
chr17 48870579 48870591 ELF4 JASPAR yes 54720872
chr17 48870579 48870592 ELF3 JASPAR yes 21254731
chr17 48870579 48870592 ELF3 JASPAR yes 54720873
chr17 48870580 48870591 ELF5 JASPAR yes 21254732
chr17 48870580 48870591 ELF5 JASPAR yes 54720874
chr17 48870581 48870590 ELK4 JASPAR yes 21254733
chr17 48870581 48870590 ELK4 JASPAR yes 54720875
chr17 48870581 48870591 ELK1 JASPAR yes 21254734
chr17 48870581 48870591 ELK3 JASPAR yes 21254735
chr17 48870581 48870591 ERF JASPAR yes 21254736
chr17 48870581 48870591 ERG JASPAR yes 21254737
chr17 48870581 48870591 ETS1 JASPAR yes 21254738
chr17 48870581 48870591 ETV1 JASPAR yes 21254739
chr17 48870581 48870591 ETV3 JASPAR yes 21254740
chr17 48870581 48870591 ETV4 JASPAR yes 21254741
chr17 48870581 48870591 ETV5 JASPAR yes 21254742
chr17 48870581 48870591 ETV6 JASPAR yes 21254743
chr17 48870581 48870591 FEV JASPAR yes 21254744
chr17 48870581 48870591 FLI1 JASPAR yes 21254745
chr17 48870581 48870591 ELK1 JASPAR yes 54720876
chr17 48870581 48870591 ELK3 JASPAR yes 54720877
chr17 48870581 48870591 ERF JASPAR yes 54720878
chr17 48870581 48870591 ERG JASPAR yes 54720879
chr17 48870581 48870591 ETS1 JASPAR yes 54720880
chr17 48870581 48870591 ETV1 JASPAR yes 54720881
chr17 48870581 48870591 ETV3 JASPAR yes 54720882
chr17 48870581 48870591 ETV4 JASPAR yes 54720883
chr17 48870581 48870591 ETV5 JASPAR yes 54720884
chr17 48870581 48870591 ETV6 JASPAR yes 54720885
chr17 48870581 48870591 FEV JASPAR yes 54720886
chr17 48870581 48870591 FLI1 JASPAR yes 54720887
chr17 48870581 48870592 ELK4 JASPAR yes 21254746
chr17 48870581 48870592 ELK4 JASPAR yes 54720888
chr17 48870582 48870590 FEV JASPAR yes 21254747
chr17 48870582 48870590 FEV JASPAR yes 54720889
chr17 48870583 48870589 ETS1 JASPAR yes 21254748
chr17 48870583 48870589 SPI1 JASPAR yes 21254749
chr17 48870583 48870589 ETS1 JASPAR yes 54720890
chr17 48870583 48870589 SPI1 JASPAR yes 54720891
chr17 48870618 48870623 ETS2 TRANSFAC yes 21254750
chr17 48870618 48870623 ETS2 TRANSFAC yes 54720892
chr17 48870618 48870626 EHF JASPAR yes 21254751
chr17 48870618 48870626 EHF JASPAR yes 54720893
chr17 48870621 48870639 ESR2 JASPAR yes 21254752
chr17 48870621 48870639 ESR2 JASPAR yes 54720894
chr17 48870625 48870641 SOX8 JASPAR yes 21254753
chr17 48870625 48870641 SOX8 JASPAR yes 54720895
chr17 48870632 48870635 MYB TRANSFAC yes 21254754
chr17 48870632 48870635 MYB TRANSFAC yes 54720896
chr17 48870643 48870657 PAX6 JASPAR yes 21254755
chr17 48870643 48870657 PAX6 JASPAR yes 54720897
SNP sites on vista25122[chr17:48870441-48870661]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48870445 rs186958653 G T
SP1
4925530
chr17 48870447 rs535536835 G A,T
SP1
4925531
chr17 48870502 rs17564787 C G no 4925532
chr17 48870571 rs191418074 C T no 4925533
Genes possibly regulated by vista25122[chr17:48870441-48870661]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48770551 48785285 - ANKRD40 ENSG00000154945.6 48785285 0.58 0.99 16043 14844
chr17 48796905 48833574 + LUC7L3 ENSG00000108848.11 48796905 0.81 0.99 16044 26464
chr17 48912011 48919709 + WFIKKN2 ENSG00000173714.7 48912011 1.0 1.0 16045 58650
chr17 48939584 48945339 - TOB1 ENSG00000141232.4 48945339 0.81 1.0 16046 25322
Expression level of Genes
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miRNAs possibly regulated by vista25122[chr17:48870441-48870661]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results