EnhancerDB
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  3. vista25132[chr17:49027288-49027482]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25132[chr17:49027288-49027482]
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Tissue distribution of vista25132
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Transcription factor that possibly regulate vista25132[chr17:49027288-49027482]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 49026798 49028431 POLR2A UCSC Txn Factor no Conserved 108271956
chr17 49026798 49028431 POLR2A UCSC Txn Factor no Conserved 108271957
chr17 49027326 49027469 RAD21 UCSC Txn Factor no Conserved 108271972
chr17 49027375 49027673 NR3C1 UCSC Txn Factor no Conserved 108271976
chr17 49027277 49027288 CDX2 JASPAR yes 21255107
chr17 49027277 49027288 CDX2 JASPAR yes 54738069
chr17 49027278 49027289 HOXA10 JASPAR yes 21255108
chr17 49027278 49027289 HOXA10 JASPAR yes 54738070
chr17 49027279 49027288 CDX1 JASPAR yes 21255109
chr17 49027279 49027288 CDX1 JASPAR yes 54738071
chr17 49027311 49027324 ELF1 JASPAR yes 21255110
chr17 49027311 49027324 ELF1 JASPAR yes 54738072
chr17 49027314 49027325 FLI1 JASPAR yes 21255111
chr17 49027314 49027325 FLI1 JASPAR yes 54738073
chr17 49027334 49027338 H1TF2 TRANSFAC yes 21255112
chr17 49027334 49027338 NFE TRANSFAC yes 21255113
chr17 49027334 49027338 SRF TRANSFAC yes 21255114
chr17 49027334 49027338 H1TF2 TRANSFAC yes 54738074
chr17 49027334 49027338 NFE TRANSFAC yes 54738075
chr17 49027334 49027338 SRF TRANSFAC yes 54738076
chr17 49027334 49027344 HOXA13 JASPAR yes 21255115
chr17 49027334 49027344 HOXB13 JASPAR yes 21255116
chr17 49027334 49027344 HOXD13 JASPAR yes 21255117
chr17 49027334 49027344 HOXA13 JASPAR yes 54738077
chr17 49027334 49027344 HOXB13 JASPAR yes 54738078
chr17 49027334 49027344 HOXD13 JASPAR yes 54738079
chr17 49027350 49027363 DUXA JASPAR yes 21255118
chr17 49027350 49027363 DUXA JASPAR yes 54738080
chr17 49027351 49027362 DUX4 JASPAR yes 21255119
chr17 49027351 49027362 DUX4 JASPAR yes 54738081
chr17 49027364 49027374 EMX1 JASPAR yes 21255120
chr17 49027364 49027374 EMX2 JASPAR yes 21255121
chr17 49027364 49027374 GSX1 JASPAR yes 21255122
chr17 49027364 49027374 HOXB3 JASPAR yes 21255123
chr17 49027364 49027374 LHX2 JASPAR yes 21255124
chr17 49027364 49027374 LHX6 JASPAR yes 21255125
chr17 49027364 49027374 MEOX1 JASPAR yes 21255126
chr17 49027364 49027374 MEOX2 JASPAR yes 21255127
chr17 49027364 49027374 POU6F1 JASPAR yes 21255128
chr17 49027364 49027374 EMX1 JASPAR yes 54738082
chr17 49027364 49027374 EMX2 JASPAR yes 54738083
chr17 49027364 49027374 GSX1 JASPAR yes 54738084
chr17 49027364 49027374 HOXB3 JASPAR yes 54738085
chr17 49027364 49027374 LHX2 JASPAR yes 54738086
chr17 49027364 49027374 LHX6 JASPAR yes 54738087
chr17 49027364 49027374 MEOX1 JASPAR yes 54738088
chr17 49027364 49027374 MEOX2 JASPAR yes 54738089
chr17 49027364 49027374 POU6F1 JASPAR yes 54738090
chr17 49027365 49027373 LBX1 JASPAR yes 21255129
chr17 49027365 49027373 PDX1 JASPAR yes 21255130
chr17 49027365 49027373 VAX1 JASPAR yes 21255131
chr17 49027365 49027373 VAX2 JASPAR yes 21255132
chr17 49027365 49027373 VSX1 JASPAR yes 21255133
chr17 49027365 49027373 VSX2 JASPAR yes 21255134
chr17 49027365 49027373 LBX1 JASPAR yes 54738091
chr17 49027365 49027373 PDX1 JASPAR yes 54738092
chr17 49027365 49027373 VAX1 JASPAR yes 54738093
chr17 49027365 49027373 VAX2 JASPAR yes 54738094
chr17 49027365 49027373 VSX1 JASPAR yes 54738095
chr17 49027365 49027373 VSX2 JASPAR yes 54738096
chr17 49027365 49027375 POU6F2 JASPAR yes 21255135
chr17 49027365 49027375 POU6F2 JASPAR yes 54738097
chr17 49027377 49027383 YY1 JASPAR yes 21255136
chr17 49027377 49027383 YY1 JASPAR yes 54738098
chr17 49027401 49027415 EBF1 JASPAR yes 21255137
chr17 49027401 49027415 EBF1 JASPAR yes 54738099
chr17 49027402 49027413 EBF1 JASPAR yes 21255138
chr17 49027402 49027413 EBF1 JASPAR yes 54738100
chr17 49027409 49027424 STAT2 JASPAR yes 21255139
chr17 49027409 49027424 STAT2 JASPAR yes 54738101
chr17 49027416 49027428 IRF1 JASPAR yes 21255140
chr17 49027416 49027428 IRF1 JASPAR yes 54738102
chr17 49027416 49027431 HNF4G JASPAR yes 21255141
chr17 49027416 49027431 HNF4G JASPAR yes 54738103
chr17 49027417 49027431 RXRB JASPAR yes 21255142
chr17 49027417 49027431 RXRG JASPAR yes 21255143
chr17 49027417 49027431 RXRB JASPAR yes 54738104
chr17 49027417 49027431 RXRG JASPAR yes 54738105
chr17 49027417 49027432 HNF4A JASPAR yes 21255144
chr17 49027417 49027432 HNF4A JASPAR yes 54738106
chr17 49027422 49027433 ESRRA JASPAR yes 21255145
chr17 49027422 49027433 ESRRA JASPAR yes 54738107
chr17 49027426 49027430 LFA1 TRANSFAC yes 21255146
chr17 49027426 49027430 LFA1 TRANSFAC yes 54738108
chr17 49027429 49027447 MAFF JASPAR yes 21255147
chr17 49027429 49027447 MAFF JASPAR yes 54738109
chr17 49027431 49027442 NRL JASPAR yes 21255148
chr17 49027431 49027442 NRL JASPAR yes 54738110
chr17 49027431 49027446 MAFK JASPAR yes 21255149
chr17 49027431 49027446 MAFK JASPAR yes 54738111
chr17 49027433 49027445 CREB1 JASPAR yes 21255150
chr17 49027433 49027445 CREB1 JASPAR yes 54738112
chr17 49027441 49027451 NHLH1 JASPAR yes 21255151
chr17 49027441 49027451 NHLH1 JASPAR yes 54738113
chr17 49027469 49027481 TAL1 JASPAR yes 21255152
chr17 49027469 49027481 TAL1 JASPAR yes 54738114
chr17 49027470 49027482 NHLH1 JASPAR yes 21255153
chr17 49027470 49027482 NHLH1 JASPAR yes 54738115
chr17 49027470 49027483 ZBTB18 JASPAR yes 21255154
chr17 49027470 49027483 ZBTB18 JASPAR yes 54738116
chr17 49027471 49027481 MSC JASPAR yes 21255155
chr17 49027471 49027481 TFAP4 JASPAR yes 21255156
chr17 49027471 49027481 MSC JASPAR yes 54738117
chr17 49027471 49027481 TFAP4 JASPAR yes 54738118
SNP sites on vista25132[chr17:49027288-49027482]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 49027289 rs73346114 C G
HOXA10 POLR2A
4927388
chr17 49027347 rs78347347 T A,C
POLR2A RAD21
4927389
chr17 49027375 rs568286477 C G
NR3C1 POLR2A POU6F2 RAD21
4927390
Genes possibly regulated by vista25132[chr17:49027288-49027482]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48939584 48945339 - TOB1 ENSG00000141232.4 48945339 0.81 1.0 16046 18051
Expression level of Genes
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miRNAs possibly regulated by vista25132[chr17:49027288-49027482]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results