EnhancerDB
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  3. vista25133[chr17:49028088-49028439]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25133[chr17:49028088-49028439]
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Tissue distribution of vista25133
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Transcription factor that possibly regulate vista25133[chr17:49028088-49028439]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 49026798 49028431 POLR2A UCSC Txn Factor no Conserved 108271956
chr17 49026798 49028431 POLR2A UCSC Txn Factor no Conserved 108271957
chr17 49027688 49028093 CTCF UCSC Txn Factor no Conserved 108271988
chr17 49028056 49028273 SPI1 UCSC Txn Factor no Conserved 108272024
chr17 49028076 49028285 MEF2A UCSC Txn Factor no Conserved 108272026
chr17 49028084 49028102 MAFF JASPAR yes 21255157
chr17 49028084 49028102 MAFF JASPAR yes 54738191
chr17 49028085 49028100 MAFK JASPAR yes 21255158
chr17 49028085 49028100 MAFK JASPAR yes 54738192
chr17 49028087 49028091 NFE TRANSFAC yes 21255159
chr17 49028087 49028091 NFE TRANSFAC yes 54738193
chr17 49028089 49028100 NRL JASPAR yes 21255160
chr17 49028089 49028100 NRL JASPAR yes 54738194
chr17 49028139 49028160 ZNF263 JASPAR yes 21255161
chr17 49028139 49028160 ZNF263 JASPAR yes 54738195
chr17 49028143 49028153 TFCP2 JASPAR yes 21255162
chr17 49028143 49028153 TFCP2 JASPAR yes 54738196
chr17 49028150 49028160 SP1 JASPAR yes 21255163
chr17 49028150 49028160 SP1 JASPAR yes 54738197
chr17 49028161 49028175 SPI1 JASPAR yes 21255164
chr17 49028161 49028175 SPIC JASPAR yes 21255165
chr17 49028161 49028175 SPI1 JASPAR yes 54738198
chr17 49028161 49028175 SPIC JASPAR yes 54738199
chr17 49028169 49028173 YY1 TRANSFAC yes 21255166
chr17 49028169 49028173 YY1 TRANSFAC yes 54738200
chr17 49028171 49028186 MEF2A JASPAR yes 21255167
chr17 49028171 49028186 MEF2A JASPAR yes 54738201
chr17 49028172 49028187 MEF2A JASPAR yes 21255168
chr17 49028172 49028187 MEF2C JASPAR yes 21255169
chr17 49028172 49028187 MEF2A JASPAR yes 54738202
chr17 49028172 49028187 MEF2C JASPAR yes 54738203
chr17 49028173 49028185 MEF2A JASPAR yes 21255170
chr17 49028173 49028185 MEF2B JASPAR yes 21255171
chr17 49028173 49028185 MEF2D JASPAR yes 21255172
chr17 49028173 49028185 MEF2A JASPAR yes 54738204
chr17 49028173 49028185 MEF2B JASPAR yes 54738205
chr17 49028173 49028185 MEF2D JASPAR yes 54738206
chr17 49028174 49028184 MEF2A JASPAR yes 21255173
chr17 49028174 49028184 MEF2A JASPAR yes 54738207
chr17 49028223 49028229 MZF1 JASPAR yes 21255174
chr17 49028223 49028229 MZF1 JASPAR yes 54738208
chr17 49028231 49028241 SP1 JASPAR yes 21255175
chr17 49028231 49028241 SP1 JASPAR yes 54738209
chr17 49028232 49028242 SP1 JASPAR yes 21255176
chr17 49028232 49028242 SP1 JASPAR yes 54738210
chr17 49028233 49028238 SP1 TRANSFAC yes 21255177
chr17 49028233 49028238 SP1 TRANSFAC yes 54738211
chr17 49028234 49028239 SP1 TRANSFAC yes 21255178
chr17 49028234 49028239 SP1 TRANSFAC yes 54738212
chr17 49028234 49028240 SP1 TRANSFAC yes 21255179
chr17 49028234 49028240 SP1 TRANSFAC yes 54738213
chr17 49028245 49028266 ZNF263 JASPAR yes 21255180
chr17 49028245 49028266 ZNF263 JASPAR yes 54738214
chr17 49028250 49028260 MZF1 JASPAR yes 21255181
chr17 49028250 49028260 MZF1 JASPAR yes 54738215
chr17 49028253 49028259 SP1 TRANSFAC yes 21255182
chr17 49028253 49028259 SP1 TRANSFAC yes 54738216
chr17 49028253 49028263 SP1 JASPAR yes 21255183
chr17 49028253 49028263 SP1 JASPAR yes 54738217
chr17 49028256 49028275 CTCF JASPAR yes 21255184
chr17 49028256 49028275 CTCF JASPAR yes 54738218
chr17 49028264 49028284 ESR1 JASPAR yes 21255185
chr17 49028264 49028284 ESR1 JASPAR yes 54738219
chr17 49028269 49028284 ESR2 JASPAR yes 21255186
chr17 49028269 49028284 ESR2 JASPAR yes 54738220
chr17 49028270 49028274 ESR1 TRANSFAC yes 21255187
chr17 49028270 49028274 ESR1 TRANSFAC yes 54738221
chr17 49028281 49028285 YY1 TRANSFAC yes 21255188
chr17 49028281 49028285 YY1 TRANSFAC yes 54738222
chr17 49028302 49028315 SMAD2 JASPAR yes 21255189
chr17 49028302 49028315 SMAD2 JASPAR yes 54738223
chr17 49028302 49028317 NR2C2 JASPAR yes 21255190
chr17 49028302 49028317 NR2C2 JASPAR yes 54738224
chr17 49028307 49028316 ZEB1 JASPAR yes 21255191
chr17 49028307 49028316 ZEB1 JASPAR yes 54738225
chr17 49028307 49028319 NHLH1 JASPAR yes 21255192
chr17 49028307 49028319 NHLH1 JASPAR yes 54738226
chr17 49028310 49028315 USF2 TRANSFAC yes 21255193
chr17 49028310 49028315 USF2 TRANSFAC yes 54738227
chr17 49028314 49028320 ATF1 TRANSFAC yes 21255194
chr17 49028314 49028320 ATF1 TRANSFAC yes 54738228
chr17 49028340 49028351 NFE2L2 JASPAR yes 21255195
chr17 49028340 49028351 NFE2L2 JASPAR yes 54738229
chr17 49028343 49028349 ESR1 TRANSFAC yes 21255196
chr17 49028343 49028349 ESR1 TRANSFAC yes 54738230
chr17 49028345 49028349 ESR1 TRANSFAC yes 21255197
chr17 49028345 49028349 ESR1 TRANSFAC yes 54738231
chr17 49028355 49028359 LFA1 TRANSFAC yes 21255198
chr17 49028355 49028359 LFA1 TRANSFAC yes 54738232
chr17 49028359 49028372 NFKB1 JASPAR yes 21255199
chr17 49028359 49028372 NFKB1 JASPAR yes 54738233
chr17 49028369 49028379 SP1 JASPAR yes 21255200
chr17 49028369 49028379 SP1 JASPAR yes 54738234
chr17 49028372 49028391 CTCF JASPAR yes 21255201
chr17 49028372 49028391 CTCF JASPAR yes 54738235
chr17 49028387 49028402 ZBTB33 JASPAR yes 21255202
chr17 49028387 49028402 ZBTB33 JASPAR yes 54738236
chr17 49028400 49028404 LFA1 TRANSFAC yes 21255203
chr17 49028400 49028404 LFA1 TRANSFAC yes 54738237
chr17 49028407 49028414 NKX3-1 JASPAR yes 21255204
chr17 49028407 49028414 NKX3-1 JASPAR yes 54738238
chr17 49028430 49028448 MAFF JASPAR yes 21255205
chr17 49028430 49028448 MAFF JASPAR yes 54738239
chr17 49028435 49028445 TFAP4 JASPAR yes 21255206
chr17 49028435 49028445 TFAP4 JASPAR yes 54738240
SNP sites on vista25133[chr17:49028088-49028439]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 49028188 rs572850622 C G,T
MEF2A POLR2A SPI1
4927399
chr17 49028254 rs76618265 C G
MEF2A MZF1 POLR2A SP1 SPI1 ZNF263
4927400
chr17 49028335 rs577292695 C T
POLR2A
4927401
Genes possibly regulated by vista25133[chr17:49028088-49028439]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48939584 48945339 - TOB1 ENSG00000141232.4 48945339 0.81 1.0 16046 17251
Expression level of Genes
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miRNAs possibly regulated by vista25133[chr17:49028088-49028439]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results