EnhancerDB
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  3. vista25136[chr17:49142836-49143005]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25136[chr17:49142836-49143005]
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Tissue distribution of vista25136
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Transcription factor that possibly regulate vista25136[chr17:49142836-49143005]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 49142834 49142838 TEAD2 TRANSFAC yes 21255339
chr17 49142834 49142838 TEAD2 TRANSFAC yes 54745448
chr17 49142847 49142851 YY1 TRANSFAC yes 21255340
chr17 49142847 49142851 YY1 TRANSFAC yes 54745449
chr17 49142852 49142856 YY1 TRANSFAC yes 21255341
chr17 49142852 49142856 YY1 TRANSFAC yes 54745450
chr17 49142857 49142875 RARA JASPAR yes 21255342
chr17 49142857 49142875 RARA JASPAR yes 54745451
chr17 49142861 49142882 ZNF263 JASPAR yes 21255343
chr17 49142861 49142882 ZNF263 JASPAR yes 54745452
chr17 49142905 49142917 TAL1 JASPAR yes 21255344
chr17 49142905 49142917 TAL1 JASPAR yes 54745453
chr17 49142920 49142931 TFAP2A JASPAR yes 21255345
chr17 49142920 49142931 TFAP2B JASPAR yes 21255346
chr17 49142920 49142931 TFAP2C JASPAR yes 21255347
chr17 49142920 49142931 TFAP2A JASPAR yes 54745454
chr17 49142920 49142931 TFAP2B JASPAR yes 54745455
chr17 49142920 49142931 TFAP2C JASPAR yes 54745456
chr17 49142937 49142942 ETS2 TRANSFAC yes 21255348
chr17 49142937 49142942 ETS2 TRANSFAC yes 54745457
chr17 49142956 49142960 LFA1 TRANSFAC yes 21255349
chr17 49142956 49142960 LFA1 TRANSFAC yes 54745458
chr17 49142964 49142967 MYB TRANSFAC yes 21255350
chr17 49142964 49142967 MYB TRANSFAC yes 54745459
chr17 49142974 49142990 GLIS1 JASPAR yes 21255351
chr17 49142974 49142990 GLIS1 JASPAR yes 54745460
chr17 49142975 49142989 GLIS3 JASPAR yes 21255352
chr17 49142975 49142989 GLIS3 JASPAR yes 54745461
SNP sites on vista25136[chr17:49142836-49143005]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 49142954 rs148912204 C A,T no 4927895
chr17 49142979 rs143638211 C T
GLIS1 GLIS3
4927896
Genes possibly regulated by vista25136[chr17:49142836-49143005]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 49039535 49198226 - SPAG9 ENSG00000008294.16 49198226 0.76 1.0 16047 44779
chr17 49230897 49239789 + NME1 ENSG00000239672.3 49230897 0.93 0.97 16048 12108
chr17 49230920 49249108 + NME1-NME2 ENSG00000243678.7 49230920 0.7 0.68 16049 12085
chr17 49230951 49249105 + NME2 ENSG00000011052.17 49230951 0.92 0.83 16050 12054
Expression level of Genes
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miRNAs possibly regulated by vista25136[chr17:49142836-49143005]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results