EnhancerDB
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  3. vista25138[chr17:49196679-49197214]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25138[chr17:49196679-49197214]
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Tissue distribution of vista25138
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Transcription factor that possibly regulate vista25138[chr17:49196679-49197214]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 49196851 49197274 REST UCSC Txn Factor no Conserved 108272073
chr17 49197016 49197483 CTCF UCSC Txn Factor no Conserved 108272091
chr17 49197118 49197414 RAD21 UCSC Txn Factor no Conserved 108272099
chr17 49196680 49196695 LEF1 JASPAR yes 21255411
chr17 49196681 49196695 TCF7L2 JASPAR yes 21255412
chr17 49196683 49196690 TCF4 TRANSFAC yes 21255413
chr17 49196684 49196690 LEF1 TRANSFAC yes 21255414
chr17 49196684 49196690 TCF4 TRANSFAC yes 21255415
chr17 49196698 49196702 YY1 TRANSFAC yes 21255416
chr17 49196704 49196713 SNAI2 JASPAR yes 21255417
chr17 49196704 49196714 ID4 JASPAR yes 21255418
chr17 49196704 49196714 NHLH1 JASPAR yes 21255419
chr17 49196704 49196714 TCF3 JASPAR yes 21255420
chr17 49196704 49196714 TCF4 JASPAR yes 21255421
chr17 49196705 49196726 REST JASPAR yes 21255422
chr17 49196706 49196715 ZEB1 JASPAR yes 21255423
chr17 49196726 49196741 MEF2C JASPAR yes 21255424
chr17 49196727 49196742 MEF2A JASPAR yes 21255425
chr17 49196736 49196750 XBP1 JASPAR yes 21255426
chr17 49196746 49196751 USF2 TRANSFAC yes 21255427
chr17 49196752 49196759 TCF4 TRANSFAC yes 21255428
chr17 49196753 49196759 LEF1 TRANSFAC yes 21255429
chr17 49196753 49196759 TCF4 TRANSFAC yes 21255430
chr17 49196756 49196762 GATA1 TRANSFAC yes 21255431
chr17 49196756 49196764 GATA5 JASPAR yes 21255432
chr17 49196762 49196766 H4TF2 TRANSFAC yes 21255433
chr17 49196774 49196777 MYB TRANSFAC yes 21255434
chr17 49196788 49196803 IRF9 JASPAR yes 21255435
chr17 49196789 49196803 IRF7 JASPAR yes 21255436
chr17 49196789 49196803 IRF8 JASPAR yes 21255437
chr17 49196830 49196834 NFE TRANSFAC yes 21255438
chr17 49196870 49196888 ESR1 JASPAR yes 21255439
chr17 49196872 49196892 ESR1 JASPAR yes 21255440
chr17 49196883 49196894 ESRRA JASPAR yes 21255441
chr17 49196887 49196891 ESR1 TRANSFAC yes 21255442
chr17 49196907 49196922 SCRT1 JASPAR yes 21255443
chr17 49196910 49196913 MYB TRANSFAC yes 21255444
chr17 49196911 49196920 SNAI2 JASPAR yes 21255445
chr17 49196911 49196921 FIGLA JASPAR yes 21255446
chr17 49196911 49196921 MSC JASPAR yes 21255447
chr17 49196930 49196941 FOXP2 JASPAR yes 21255448
chr17 49196931 49196935 TEAD2 TRANSFAC yes 21255449
chr17 49196931 49196936 TBP TRANSFAC yes 21255450
chr17 49196935 49196945 MYF6 JASPAR yes 21255451
chr17 49196949 49196954 ETS2 TRANSFAC yes 21255452
chr17 49196951 49196961 RELA JASPAR yes 21255453
chr17 49196960 49196970 NFATC3 JASPAR yes 21255454
chr17 49196962 49196968 ETS1 JASPAR yes 21255455
chr17 49196972 49196981 NFIX JASPAR yes 21255456
chr17 49196972 49196982 NFIA JASPAR yes 21255457
chr17 49196974 49196980 NFIC JASPAR yes 21255458
chr17 49196974 49196986 PKNOX1 JASPAR yes 21255459
chr17 49196974 49196986 PKNOX2 JASPAR yes 21255460
chr17 49196974 49196986 TGIF1 JASPAR yes 21255461
chr17 49196974 49196986 TGIF2 JASPAR yes 21255462
chr17 49196980 49196984 NFE TRANSFAC yes 21255463
chr17 49197000 49197008 SP1 TRANSFAC yes 21255464
chr17 49197000 49197010 SP1 JASPAR yes 21255465
chr17 49197001 49197007 SP1 TRANSFAC yes 21255466
chr17 49197001 49197011 SP1 JASPAR yes 21255467
chr17 49197002 49197009 SP1 TRANSFAC yes 21255468
chr17 49197003 49197008 SP1 TRANSFAC yes 21255469
chr17 49197003 49197009 SP1 TRANSFAC yes 21255470
chr17 49197003 49197010 SP1 TRANSFAC yes 21255471
chr17 49197010 49197014 H1TF2 TRANSFAC yes 21255472
chr17 49197010 49197014 NFE TRANSFAC yes 21255473
chr17 49197010 49197014 SRF TRANSFAC yes 21255474
chr17 49197017 49197032 MEF2C JASPAR yes 21255475
chr17 49197018 49197033 MEF2A JASPAR yes 21255476
chr17 49197019 49197030 FOXB1 JASPAR yes 21255477
chr17 49197019 49197030 FOXC1 JASPAR yes 21255478
chr17 49197019 49197031 FOXC2 JASPAR yes 21255479
chr17 49197019 49197031 MEF2A JASPAR yes 21255480
chr17 49197019 49197031 MEF2B JASPAR yes 21255481
chr17 49197019 49197031 MEF2D JASPAR yes 21255482
chr17 49197020 49197030 MEF2A JASPAR yes 21255483
chr17 49197021 49197025 TEAD2 TRANSFAC yes 21255484
chr17 49197021 49197026 TBP TRANSFAC yes 21255485
chr17 49197021 49197027 TMF TRANSFAC yes 21255486
chr17 49197047 49197068 REST JASPAR yes 21255487
chr17 49197051 49197055 NFE TRANSFAC yes 21255488
chr17 49197055 49197066 ESRRB JASPAR yes 21255489
chr17 49197074 49197086 TEAD1 JASPAR yes 21255490
chr17 49197075 49197081 PEA3 TRANSFAC yes 21255491
chr17 49197076 49197086 TEAD1 JASPAR yes 21255492
chr17 49197076 49197086 TEAD4 JASPAR yes 21255493
chr17 49197077 49197085 TEAD3 JASPAR yes 21255494
chr17 49197094 49197099 GATA2 JASPAR yes 21255495
chr17 49197098 49197113 SOX21 JASPAR yes 21255496
chr17 49197098 49197114 SOX4 JASPAR yes 21255497
chr17 49197105 49197120 FOXA1 JASPAR yes 21255498
chr17 49197106 49197118 FOXI1 JASPAR yes 21255499
chr17 49197106 49197121 FOXP1 JASPAR yes 21255500
chr17 49197107 49197116 SRY JASPAR yes 21255501
chr17 49197107 49197118 FOXP2 JASPAR yes 21255502
chr17 49197107 49197119 FOXC2 JASPAR yes 21255503
chr17 49197108 49197116 FOXG1 JASPAR yes 21255504
chr17 49197108 49197116 FOXO3 JASPAR yes 21255505
chr17 49197108 49197119 FOXB1 JASPAR yes 21255506
chr17 49197108 49197119 FOXC1 JASPAR yes 21255507
chr17 49197109 49197120 FOXA1 JASPAR yes 21255508
chr17 49197114 49197126 FOXI1 JASPAR yes 21255509
chr17 49197117 49197121 YY1 TRANSFAC yes 21255510
chr17 49197154 49197160 SOX10 JASPAR yes 21255511
chr17 49197156 49197167 TBX2 JASPAR yes 21255512
chr17 49197188 49197200 PROX1 JASPAR yes 21255513
SNP sites on vista25138[chr17:49196679-49197214]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 49196680 rs144554909 G A
LEF1
4928316
chr17 49196870 rs1001475 T C
ESR1 REST
4928317
chr17 49196872 rs62063016 G C
ESR1 REST
4928318
chr17 49196885 rs1001474 C G
ESR1 ESRRA REST
4928319
chr17 49196918 rs1005513 T C
FIGLA MSC REST SCRT1 SNAI2
4928320
chr17 49197104 rs77839552 C T
CTCF REST SOX21 SOX4
4928321
Genes possibly regulated by vista25138[chr17:49196679-49197214]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 49039535 49198226 - SPAG9 ENSG00000008294.16 49198226 0.76 1.0 16047 98988
chr17 49230897 49239789 + NME1 ENSG00000239672.3 49230897 0.93 0.97 16048 66317
chr17 49230920 49249108 + NME1-NME2 ENSG00000243678.7 49230920 0.7 0.68 16049 66294
chr17 49230951 49249105 + NME2 ENSG00000011052.17 49230951 0.92 0.83 16050 66263
Expression level of Genes
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miRNAs possibly regulated by vista25138[chr17:49196679-49197214]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results