EnhancerDB
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  3. vista25139[chr17:49205476-49205735]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25139[chr17:49205476-49205735]
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Tissue distribution of vista25139
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Transcription factor that possibly regulate vista25139[chr17:49205476-49205735]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 49205392 49205742 STAT5A UCSC Txn Factor no Conserved 108272123
chr17 49205434 49205834 MXI1 UCSC Txn Factor no Conserved 108272126
chr17 49205466 49205481 MEF2C JASPAR yes 21255514
chr17 49205466 49205481 MEF2C JASPAR yes 54752559
chr17 49205467 49205482 MEF2A JASPAR yes 21255515
chr17 49205467 49205482 MEF2A JASPAR yes 54752560
chr17 49205504 49205508 YY1 TRANSFAC yes 21255516
chr17 49205504 49205508 YY1 TRANSFAC yes 54752561
chr17 49205508 49205522 RORA JASPAR yes 21255517
chr17 49205508 49205522 RORA JASPAR yes 54752562
chr17 49205512 49205521 NKX3-2 JASPAR yes 21255518
chr17 49205512 49205521 NKX3-2 JASPAR yes 54752563
chr17 49205512 49205522 NKX2-3 JASPAR yes 21255519
chr17 49205512 49205522 NKX2-3 JASPAR yes 54752564
chr17 49205518 49205522 TEAD2 TRANSFAC yes 21255520
chr17 49205518 49205522 TEAD2 TRANSFAC yes 54752565
chr17 49205521 49205531 MAX JASPAR yes 21255521
chr17 49205521 49205531 MAX JASPAR yes 54752566
chr17 49205524 49205536 POU2F1 JASPAR yes 21255522
chr17 49205524 49205536 POU2F1 JASPAR yes 54752567
chr17 49205524 49205538 POU1F1 JASPAR yes 21255523
chr17 49205524 49205538 POU1F1 JASPAR yes 54752568
chr17 49205525 49205537 POU3F1 JASPAR yes 21255524
chr17 49205525 49205537 POU3F2 JASPAR yes 21255525
chr17 49205525 49205537 POU3F1 JASPAR yes 54752569
chr17 49205525 49205537 POU3F2 JASPAR yes 54752570
chr17 49205525 49205538 POU2F2 JASPAR yes 21255526
chr17 49205525 49205538 POU2F2 JASPAR yes 54752571
chr17 49205530 49205544 GLIS3 JASPAR yes 21255527
chr17 49205530 49205544 GLIS3 JASPAR yes 54752572
chr17 49205539 49205543 LFA1 TRANSFAC yes 21255528
chr17 49205539 49205543 LFA1 TRANSFAC yes 54752573
chr17 49205550 49205570 TP53 JASPAR yes 21255529
chr17 49205550 49205570 TP53 JASPAR yes 54752574
chr17 49205552 49205567 HSF1 JASPAR yes 21255530
chr17 49205552 49205567 HSF1 JASPAR yes 54752575
chr17 49205555 49205559 YY1 TRANSFAC yes 21255531
chr17 49205555 49205559 YY1 TRANSFAC yes 54752576
chr17 49205555 49205570 STAT1 JASPAR yes 21255532
chr17 49205555 49205570 STAT1 JASPAR yes 54752577
chr17 49205557 49205568 STAT1 JASPAR yes 21255533
chr17 49205557 49205568 STAT3 JASPAR yes 21255534
chr17 49205557 49205568 STAT1 JASPAR yes 54752578
chr17 49205557 49205568 STAT3 JASPAR yes 54752579
chr17 49205575 49205578 MYB TRANSFAC yes 21255535
chr17 49205575 49205578 MYB TRANSFAC yes 54752580
chr17 49205575 49205588 ELF3 JASPAR yes 21255536
chr17 49205575 49205588 ELF3 JASPAR yes 54752581
chr17 49205589 49205603 TLX1 JASPAR yes 21255537
chr17 49205589 49205603 TLX1 JASPAR yes 54752582
chr17 49205590 49205596 ESR1 TRANSFAC yes 21255538
chr17 49205590 49205596 ESR1 TRANSFAC yes 54752583
chr17 49205591 49205610 RFX2 JASPAR yes 21255539
chr17 49205591 49205610 RFX2 JASPAR yes 54752584
chr17 49205592 49205596 ESR1 TRANSFAC yes 21255540
chr17 49205592 49205596 ESR1 TRANSFAC yes 54752585
chr17 49205595 49205611 RFX2 JASPAR yes 21255541
chr17 49205595 49205611 RFX3 JASPAR yes 21255542
chr17 49205595 49205611 RFX4 JASPAR yes 21255543
chr17 49205595 49205611 RFX5 JASPAR yes 21255544
chr17 49205595 49205611 RFX2 JASPAR yes 54752586
chr17 49205595 49205611 RFX3 JASPAR yes 54752587
chr17 49205595 49205611 RFX4 JASPAR yes 54752588
chr17 49205595 49205611 RFX5 JASPAR yes 54752589
chr17 49205596 49205615 RFX2 JASPAR yes 21255545
chr17 49205596 49205615 RFX2 JASPAR yes 54752590
chr17 49205616 49205619 MYB TRANSFAC yes 21255546
chr17 49205616 49205619 MYB TRANSFAC yes 54752591
chr17 49205616 49205629 ELF3 JASPAR yes 21255547
chr17 49205616 49205629 ELF3 JASPAR yes 54752592
chr17 49205623 49205642 RFX2 JASPAR yes 21255548
chr17 49205623 49205642 RFX2 JASPAR yes 54752593
chr17 49205625 49205640 RFX5 JASPAR yes 21255549
chr17 49205625 49205640 RFX5 JASPAR yes 54752594
chr17 49205627 49205643 RFX2 JASPAR yes 21255550
chr17 49205627 49205643 RFX3 JASPAR yes 21255551
chr17 49205627 49205643 RFX4 JASPAR yes 21255552
chr17 49205627 49205643 RFX5 JASPAR yes 21255553
chr17 49205627 49205643 RFX2 JASPAR yes 54752595
chr17 49205627 49205643 RFX3 JASPAR yes 54752596
chr17 49205627 49205643 RFX4 JASPAR yes 54752597
chr17 49205627 49205643 RFX5 JASPAR yes 54752598
chr17 49205628 49205647 RFX2 JASPAR yes 21255554
chr17 49205628 49205647 RFX2 JASPAR yes 54752599
chr17 49205654 49205658 LFA1 TRANSFAC yes 21255555
chr17 49205654 49205658 LFA1 TRANSFAC yes 54752600
chr17 49205663 49205668 SP1 TRANSFAC yes 21255556
chr17 49205663 49205668 SP1 TRANSFAC yes 54752601
chr17 49205689 49205704 TFAP2A JASPAR yes 21255557
chr17 49205689 49205704 TFAP2A JASPAR yes 54752602
chr17 49205692 49205704 TFAP2A JASPAR yes 21255558
chr17 49205692 49205704 TFAP2B JASPAR yes 21255559
chr17 49205692 49205704 TFAP2C JASPAR yes 21255560
chr17 49205692 49205704 TFAP2A JASPAR yes 54752603
chr17 49205692 49205704 TFAP2B JASPAR yes 54752604
chr17 49205692 49205704 TFAP2C JASPAR yes 54752605
chr17 49205692 49205707 TFAP2A JASPAR yes 21255561
chr17 49205692 49205707 TFAP2A JASPAR yes 54752606
chr17 49205700 49205715 MEF2C JASPAR yes 21255562
chr17 49205700 49205715 MEF2C JASPAR yes 54752607
chr17 49205726 49205730 H4TF2 TRANSFAC yes 21255563
chr17 49205726 49205730 H4TF2 TRANSFAC yes 54752608
SNP sites on vista25139[chr17:49205476-49205735]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 49205498 rs191936124 G T
MXI1 STAT5A
4928404
chr17 49205585 rs116542202 G A
ELF3 MXI1 STAT5A
4928405
chr17 49205621 rs138058696 T G
ELF3 MXI1 STAT5A
4928406
chr17 49205660 rs73346197 C T
MXI1 STAT5A
4928407
Genes possibly regulated by vista25139[chr17:49205476-49205735]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 49039535 49198226 - SPAG9 ENSG00000008294.16 49198226 0.76 1.0 16047 92750
chr17 49230897 49239789 + NME1 ENSG00000239672.3 49230897 0.93 0.97 16048 74838
chr17 49230920 49249108 + NME1-NME2 ENSG00000243678.7 49230920 0.7 0.68 16049 74815
chr17 49230951 49249105 + NME2 ENSG00000011052.17 49230951 0.92 0.83 16050 74784
Expression level of Genes
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miRNAs possibly regulated by vista25139[chr17:49205476-49205735]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results