EnhancerDB
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  3. vista25142[chr17:49324611-49324828]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25142[chr17:49324611-49324828]
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Tissue distribution of vista25142
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Transcription factor that possibly regulate vista25142[chr17:49324611-49324828]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 49324607 49324621 RORA JASPAR yes 21255645
chr17 49324607 49324621 RORA JASPAR yes 54759501
chr17 49324609 49324620 NFIL3 JASPAR yes 21255646
chr17 49324609 49324620 NFIL3 JASPAR yes 54759502
chr17 49324611 49324626 MEF2C JASPAR yes 21255647
chr17 49324611 49324626 MEF2C JASPAR yes 54759503
chr17 49324612 49324627 MEF2A JASPAR yes 21255648
chr17 49324612 49324627 MEF2A JASPAR yes 54759504
chr17 49324613 49324625 MEF2A JASPAR yes 21255649
chr17 49324613 49324625 MEF2D JASPAR yes 21255650
chr17 49324613 49324625 MEF2A JASPAR yes 54759505
chr17 49324613 49324625 MEF2D JASPAR yes 54759506
chr17 49324614 49324624 MEF2A JASPAR yes 21255651
chr17 49324614 49324624 MEF2A JASPAR yes 54759507
chr17 49324623 49324628 H4TF1 TRANSFAC yes 21255652
chr17 49324623 49324628 H4TF1 TRANSFAC yes 54759508
chr17 49324630 49324644 JUN JASPAR yes 21255653
chr17 49324630 49324644 JUN JASPAR yes 54759509
chr17 49324634 49324645 FOS JASPAR yes 21255654
chr17 49324634 49324645 FOS JASPAR yes 54759510
chr17 49324635 49324646 FOSL2 JASPAR yes 21255655
chr17 49324635 49324646 JUNB JASPAR yes 21255656
chr17 49324635 49324646 FOSL2 JASPAR yes 54759511
chr17 49324635 49324646 JUNB JASPAR yes 54759512
chr17 49324635 49324649 JUN JASPAR yes 21255657
chr17 49324635 49324649 JUN JASPAR yes 54759513
chr17 49324636 49324642 JUN TRANSFAC yes 21255658
chr17 49324636 49324642 JUN TRANSFAC yes 54759514
chr17 49324658 49324662 TEAD2 TRANSFAC yes 21255659
chr17 49324658 49324662 TEAD2 TRANSFAC yes 54759515
chr17 49324658 49324663 TBP TRANSFAC yes 21255660
chr17 49324658 49324663 TBP TRANSFAC yes 54759516
chr17 49324658 49324664 TFIID TRANSFAC yes 21255661
chr17 49324658 49324664 TFIID TRANSFAC yes 54759517
chr17 49324664 49324682 MAFF JASPAR yes 21255662
chr17 49324664 49324682 MAFF JASPAR yes 54759518
chr17 49324665 49324680 MAFK JASPAR yes 21255663
chr17 49324665 49324680 MAFK JASPAR yes 54759519
chr17 49324677 49324692 MEF2A JASPAR yes 21255664
chr17 49324677 49324692 MEF2A JASPAR yes 54759520
chr17 49324678 49324693 MEF2C JASPAR yes 21255665
chr17 49324678 49324693 MEF2C JASPAR yes 54759521
chr17 49324681 49324685 YY1 TRANSFAC yes 21255666
chr17 49324681 49324685 YY1 TRANSFAC yes 54759522
chr17 49324684 49324695 NFIL3 JASPAR yes 21255667
chr17 49324684 49324695 NFIL3 JASPAR yes 54759523
chr17 49324696 49324709 SMAD2 JASPAR yes 21255668
chr17 49324696 49324709 SMAD2 JASPAR yes 54759524
chr17 49324725 49324729 YY1 TRANSFAC yes 21255669
chr17 49324725 49324729 YY1 TRANSFAC yes 54759525
chr17 49324726 49324746 TBX19 JASPAR yes 21255670
chr17 49324726 49324746 TBX19 JASPAR yes 54759526
chr17 49324730 49324735 GATA1 TRANSFAC yes 21255671
chr17 49324730 49324735 GATA1 TRANSFAC yes 54759527
chr17 49324744 49324747 MYB TRANSFAC yes 21255672
chr17 49324744 49324747 MYB TRANSFAC yes 54759528
chr17 49324745 49324760 SOX21 JASPAR yes 21255673
chr17 49324745 49324760 SOX21 JASPAR yes 54759529
chr17 49324750 49324771 IRF1 JASPAR yes 21255674
chr17 49324750 49324771 IRF1 JASPAR yes 54759530
chr17 49324751 49324764 POU2F2 JASPAR yes 21255675
chr17 49324751 49324764 POU2F2 JASPAR yes 54759531
chr17 49324751 49324765 POU1F1 JASPAR yes 21255676
chr17 49324751 49324765 POU1F1 JASPAR yes 54759532
chr17 49324752 49324764 POU3F1 JASPAR yes 21255677
chr17 49324752 49324764 POU3F2 JASPAR yes 21255678
chr17 49324752 49324764 POU3F1 JASPAR yes 54759533
chr17 49324752 49324764 POU3F2 JASPAR yes 54759534
chr17 49324752 49324765 POU3F3 JASPAR yes 21255679
chr17 49324752 49324765 POU3F3 JASPAR yes 54759535
chr17 49324752 49324767 PRDM1 JASPAR yes 21255680
chr17 49324752 49324767 STAT2 JASPAR yes 21255681
chr17 49324752 49324767 PRDM1 JASPAR yes 54759536
chr17 49324752 49324767 STAT2 JASPAR yes 54759537
chr17 49324753 49324767 STAT1 JASPAR yes 21255682
chr17 49324753 49324767 STAT1 JASPAR yes 54759538
chr17 49324754 49324766 IRF1 JASPAR yes 21255683
chr17 49324754 49324766 IRF1 JASPAR yes 54759539
chr17 49324754 49324768 IRF7 JASPAR yes 21255684
chr17 49324754 49324768 IRF7 JASPAR yes 54759540
chr17 49324759 49324763 YY1 TRANSFAC yes 21255685
chr17 49324759 49324763 YY1 TRANSFAC yes 54759541
chr17 49324770 49324774 NFE TRANSFAC yes 21255686
chr17 49324770 49324774 NFE TRANSFAC yes 54759542
chr17 49324770 49324775 GATA1 TRANSFAC yes 21255687
chr17 49324770 49324775 GATA1 TRANSFAC yes 54759543
chr17 49324770 49324776 GATA3 JASPAR yes 21255688
chr17 49324770 49324776 GATA3 JASPAR yes 54759544
chr17 49324786 49324800 ONECUT3 JASPAR yes 21255689
chr17 49324786 49324800 ONECUT3 JASPAR yes 54759545
chr17 49324796 49324817 IRF1 JASPAR yes 21255690
chr17 49324796 49324817 IRF1 JASPAR yes 54759546
chr17 49324797 49324818 IRF1 JASPAR yes 21255691
chr17 49324797 49324818 IRF1 JASPAR yes 54759547
chr17 49324798 49324813 PRDM1 JASPAR yes 21255692
chr17 49324798 49324813 STAT2 JASPAR yes 21255693
chr17 49324798 49324813 PRDM1 JASPAR yes 54759548
chr17 49324798 49324813 STAT2 JASPAR yes 54759549
chr17 49324798 49324819 IRF1 JASPAR yes 21255694
chr17 49324798 49324819 IRF1 JASPAR yes 54759550
chr17 49324799 49324820 IRF1 JASPAR yes 21255695
chr17 49324799 49324820 IRF1 JASPAR yes 54759551
chr17 49324800 49324821 IRF1 JASPAR yes 21255696
chr17 49324800 49324821 IRF1 JASPAR yes 54759552
chr17 49324801 49324816 FOXP1 JASPAR yes 21255697
chr17 49324801 49324816 FOXP1 JASPAR yes 54759553
chr17 49324801 49324822 IRF1 JASPAR yes 21255698
chr17 49324801 49324822 IRF1 JASPAR yes 54759554
chr17 49324802 49324817 FOXP1 JASPAR yes 21255699
chr17 49324802 49324817 FOXP1 JASPAR yes 54759555
chr17 49324802 49324823 IRF1 JASPAR yes 21255700
chr17 49324802 49324823 IRF1 JASPAR yes 54759556
chr17 49324803 49324818 FOXP1 JASPAR yes 21255701
chr17 49324803 49324818 FOXP1 JASPAR yes 54759557
chr17 49324803 49324824 IRF1 JASPAR yes 21255702
chr17 49324803 49324824 IRF1 JASPAR yes 54759558
chr17 49324804 49324819 FOXP1 JASPAR yes 21255703
chr17 49324804 49324819 FOXP1 JASPAR yes 54759559
chr17 49324804 49324825 IRF1 JASPAR yes 21255704
chr17 49324804 49324825 IRF1 JASPAR yes 54759560
chr17 49324805 49324820 FOXP1 JASPAR yes 21255705
chr17 49324805 49324820 FOXP1 JASPAR yes 54759561
chr17 49324806 49324821 FOXP1 JASPAR yes 21255706
chr17 49324806 49324821 FOXP1 JASPAR yes 54759562
chr17 49324807 49324822 FOXP1 JASPAR yes 21255707
chr17 49324807 49324822 FOXP1 JASPAR yes 54759563
chr17 49324808 49324823 FOXP1 JASPAR yes 21255708
chr17 49324808 49324823 FOXP1 JASPAR yes 54759564
chr17 49324809 49324824 FOXP1 JASPAR yes 21255709
chr17 49324809 49324824 FOXP1 JASPAR yes 54759565
chr17 49324810 49324825 FOXP1 JASPAR yes 21255710
chr17 49324810 49324825 FOXP1 JASPAR yes 54759566
chr17 49324811 49324826 FOXP1 JASPAR yes 21255711
chr17 49324811 49324826 FOXP1 JASPAR yes 54759567
SNP sites on vista25142[chr17:49324611-49324828]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 49324709 rs140404068 G C
SMAD2
4929054
chr17 49324752 rs7214942 G T
IRF1 POU1F1 POU2F2 POU3F1 POU3F2 POU3F3 PRDM1 SOX21 STAT2
4929055
chr17 49324802 rs58720477 CTTTTTTT C
FOXP1 IRF1 PRDM1 STAT2
4929056
chr17 49324802 rs766138852 CTTTTTTT C
FOXP1 IRF1 PRDM1 STAT2
4929057
chr17 49324802 rs796505503 CTTTTTTT C
FOXP1 IRF1 PRDM1 STAT2
4929058
Genes possibly regulated by vista25142[chr17:49324611-49324828]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 49230897 49239789 + NME1 ENSG00000239672.3 49230897 0.93 0.97 16048 6286
chr17 49230920 49249108 + NME1-NME2 ENSG00000243678.7 49230920 0.7 0.68 16049 6309
chr17 49230951 49249105 + NME2 ENSG00000011052.17 49230951 0.92 0.83 16050 6340
chr17 49254786 49337524 - MBTD1 ENSG00000011258.11 49337524 0.77 0.99 16051 87304
chr17 49337889 49375297 + UTP18 ENSG00000011260.9 49337889 0.73 0.99 16052 86939
Expression level of Genes
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miRNAs possibly regulated by vista25142[chr17:49324611-49324828]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results