EnhancerDB
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  3. vista25174[chr17:53006732-53007120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25174[chr17:53006732-53007120]
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Tissue distribution of vista25174
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Transcription factor that possibly regulate vista25174[chr17:53006732-53007120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 53006732 53006747 FOXP1 JASPAR yes 21256840
chr17 53006733 53006748 FOXP1 JASPAR yes 21256841
chr17 53006734 53006749 FOXP1 JASPAR yes 21256842
chr17 53006735 53006750 FOXP1 JASPAR yes 21256843
chr17 53006758 53006769 BATF JASPAR yes 21256844
chr17 53006759 53006770 FOSL2 JASPAR yes 21256845
chr17 53006760 53006771 FOS JASPAR yes 21256846
chr17 53006760 53006771 FOSL1 JASPAR yes 21256847
chr17 53006761 53006770 JDP2 JASPAR yes 21256848
chr17 53006764 53006781 PAX1 JASPAR yes 21256849
chr17 53006764 53006781 PAX9 JASPAR yes 21256850
chr17 53006782 53006786 YY1 TRANSFAC yes 21256851
chr17 53006791 53006809 SRF JASPAR yes 21256852
chr17 53006793 53006809 SRF JASPAR yes 21256853
chr17 53006793 53006811 SRF JASPAR yes 21256854
chr17 53006794 53006806 SRF JASPAR yes 21256855
chr17 53006796 53006808 SRF JASPAR yes 21256856
chr17 53006823 53006832 PITX3 JASPAR yes 21256857
chr17 53006824 53006832 OTX1 JASPAR yes 21256858
chr17 53006824 53006832 OTX2 JASPAR yes 21256859
chr17 53006825 53006837 GRHL1 JASPAR yes 21256860
chr17 53006827 53006848 IRF1 JASPAR yes 21256861
chr17 53006831 53006843 IRF1 JASPAR yes 21256862
chr17 53006856 53006860 TEAD2 TRANSFAC yes 21256863
chr17 53006858 53006861 MYB TRANSFAC yes 21256864
chr17 53006862 53006866 TEAD2 TRANSFAC yes 21256865
chr17 53006862 53006867 TBP TRANSFAC yes 21256866
chr17 53006879 53006886 NKX3-1 JASPAR yes 21256867
chr17 53006889 53006902 ELF1 JASPAR yes 21256868
chr17 53006890 53006893 MYB TRANSFAC yes 21256869
chr17 53006890 53006902 EHF JASPAR yes 21256870
chr17 53006890 53006902 ELF1 JASPAR yes 21256871
chr17 53006890 53006903 ELF3 JASPAR yes 21256872
chr17 53006891 53006902 ELF5 JASPAR yes 21256873
chr17 53006891 53006902 ETV2 JASPAR yes 21256874
chr17 53006892 53006902 ERF JASPAR yes 21256875
chr17 53006892 53006902 ERG JASPAR yes 21256876
chr17 53006892 53006902 ETS1 JASPAR yes 21256877
chr17 53006892 53006902 FEV JASPAR yes 21256878
chr17 53006892 53006902 FLI1 JASPAR yes 21256879
chr17 53006892 53006903 FLI1 JASPAR yes 21256880
chr17 53006893 53006901 FEV JASPAR yes 21256881
chr17 53006903 53006919 SOX4 JASPAR yes 21256882
chr17 53006922 53006926 YY1 TRANSFAC yes 21256883
chr17 53006924 53006935 HOXC12 JASPAR yes 21256884
chr17 53006925 53006935 HMBOX1 JASPAR yes 21256885
chr17 53006927 53006930 MYB TRANSFAC yes 21256886
chr17 53006946 53006959 ATF4 JASPAR yes 21256887
chr17 53006949 53006960 PHOX2A JASPAR yes 21256888
chr17 53006957 53006960 MYB TRANSFAC yes 21256889
chr17 53006960 53006964 YY1 TRANSFAC yes 21256890
chr17 53006964 53006976 POU3F1 JASPAR yes 21256891
chr17 53006965 53006973 FOXL1 JASPAR yes 21256892
chr17 53006965 53006977 FOXC2 JASPAR yes 21256893
chr17 53006965 53006979 FOXF2 JASPAR yes 21256894
chr17 53006966 53006974 FOXG1 JASPAR yes 21256895
chr17 53006988 53007002 SPI1 JASPAR yes 21256896
chr17 53006992 53007002 POU6F2 JASPAR yes 21256897
chr17 53006994 53007005 FOXH1 JASPAR yes 21256898
chr17 53006996 53007000 YY1 TRANSFAC yes 21256899
chr17 53007010 53007014 YY1 TRANSFAC yes 21256900
chr17 53007052 53007067 IRF9 JASPAR yes 21256901
chr17 53007054 53007058 TEAD2 TRANSFAC yes 21256902
chr17 53007055 53007068 POU2F2 JASPAR yes 21256903
chr17 53007055 53007069 POU1F1 JASPAR yes 21256904
chr17 53007056 53007068 POU3F1 JASPAR yes 21256905
chr17 53007056 53007068 POU3F2 JASPAR yes 21256906
chr17 53007063 53007067 YY1 TRANSFAC yes 21256907
chr17 53007089 53007095 TBP TRANSFAC yes 21256908
chr17 53007094 53007104 CLOCK JASPAR yes 21256909
chr17 53007094 53007104 MYF6 JASPAR yes 21256910
chr17 53007094 53007104 NEUROG2 JASPAR yes 21256911
chr17 53007095 53007105 MAX JASPAR yes 21256912
chr17 53007096 53007117 IRF1 JASPAR yes 21256913
chr17 53007097 53007112 FOXP1 JASPAR yes 21256914
chr17 53007097 53007118 IRF1 JASPAR yes 21256915
chr17 53007098 53007109 FOXP2 JASPAR yes 21256916
chr17 53007098 53007113 STAT2 JASPAR yes 21256917
chr17 53007099 53007114 FOXP1 JASPAR yes 21256918
chr17 53007101 53007116 FOXP1 JASPAR yes 21256919
chr17 53007102 53007117 FOXP1 JASPAR yes 21256920
chr17 53007103 53007118 FOXP1 JASPAR yes 21256921
chr17 53007104 53007119 FOXP1 JASPAR yes 21256922
SNP sites on vista25174[chr17:53006732-53007120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 53006806 rs529131198 GGTATTCATGATTT G
SRF
4936833
chr17 53006890 rs9916547 G A,T
EHF ELF1 ELF3 MYB
4936834
chr17 53007118 rs547679692 C T
FOXP1 IRF1
4936835
Genes possibly regulated by vista25174[chr17:53006732-53007120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 52976748 53039310 + TOM1L1 ENSG00000141198.9 52976748 0.89 1.0 16057 70016
chr17 53029263 53046146 - COX11 ENSG00000166260.6 53046146 0.81 0.99 16058 60974
chr17 53046088 53241646 + STXBP4 ENSG00000166263.9 53046088 0.81 0.97 16059 61032
Expression level of Genes
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miRNAs possibly regulated by vista25174[chr17:53006732-53007120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results