EnhancerDB
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  3. vista2518[chr1:94429275-94429464]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2518[chr1:94429275-94429464]
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Tissue distribution of vista2518
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Transcription factor that possibly regulate vista2518[chr1:94429275-94429464]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 94429264 94429278 XBP1 JASPAR yes 30845193
chr1 94429264 94429278 XBP1 JASPAR yes 118331595
chr1 94429277 94429287 SREBF2 JASPAR yes 30845196
chr1 94429277 94429287 SREBF2 JASPAR yes 118331596
chr1 94429300 94429311 FLI1 JASPAR yes 30845197
chr1 94429300 94429311 FLI1 JASPAR yes 118331597
chr1 94429300 94429313 ELF3 JASPAR yes 30845198
chr1 94429300 94429313 ELF3 JASPAR yes 118331598
chr1 94429301 94429312 ELF5 JASPAR yes 30845199
chr1 94429301 94429312 ELF5 JASPAR yes 118331599
chr1 94429301 94429313 EHF JASPAR yes 30845200
chr1 94429301 94429313 ELF1 JASPAR yes 30845201
chr1 94429301 94429313 ELF4 JASPAR yes 30845202
chr1 94429301 94429313 EHF JASPAR yes 118331600
chr1 94429301 94429313 ELF1 JASPAR yes 118331601
chr1 94429301 94429313 ELF4 JASPAR yes 118331602
chr1 94429301 94429314 ELF1 JASPAR yes 30845203
chr1 94429301 94429314 ELF1 JASPAR yes 118331603
chr1 94429317 94429336 CTCF JASPAR yes 30845204
chr1 94429317 94429336 CTCF JASPAR yes 118331604
chr1 94429341 94429356 FOXP1 JASPAR yes 30845205
chr1 94429341 94429356 FOXP1 JASPAR yes 118331605
chr1 94429342 94429357 FOXP1 JASPAR yes 30845206
chr1 94429342 94429357 FOXP1 JASPAR yes 118331606
chr1 94429343 94429358 FOXP1 JASPAR yes 30845207
chr1 94429343 94429358 FOXP1 JASPAR yes 118331607
chr1 94429344 94429359 FOXP1 JASPAR yes 30845208
chr1 94429344 94429359 FOXP1 JASPAR yes 118331608
chr1 94429346 94429361 MEF2C JASPAR yes 30845209
chr1 94429346 94429361 MEF2C JASPAR yes 118331609
chr1 94429349 94429367 SRF JASPAR yes 30845210
chr1 94429349 94429367 SRF JASPAR yes 118331610
chr1 94429362 94429377 HNF1A JASPAR yes 30845211
chr1 94429362 94429377 HNF1A JASPAR yes 118331611
chr1 94429363 94429375 HNF1B JASPAR yes 30845212
chr1 94429363 94429375 HNF1B JASPAR yes 118331612
chr1 94429363 94429376 HNF1B JASPAR yes 30845213
chr1 94429363 94429376 HNF1B JASPAR yes 118331613
chr1 94429372 94429375 MYB TRANSFAC yes 30845214
chr1 94429372 94429375 MYB TRANSFAC yes 118331614
chr1 94429385 94429403 MAFF JASPAR yes 30845215
chr1 94429385 94429403 MAFF JASPAR yes 118331615
chr1 94429386 94429401 MAFK JASPAR yes 30845216
chr1 94429386 94429401 MAFK JASPAR yes 118331616
chr1 94429431 94429437 JUN TRANSFAC yes 30845217
chr1 94429431 94429437 JUN TRANSFAC yes 118331617
chr1 94429435 94429438 MYB TRANSFAC yes 30845218
chr1 94429435 94429438 MYB TRANSFAC yes 118331618
chr1 94429444 94429456 PKNOX2 JASPAR yes 30845219
chr1 94429444 94429456 PKNOX2 JASPAR yes 118331619
chr1 94429456 94429461 H4TF1 TRANSFAC yes 30845220
chr1 94429456 94429461 H4TF1 TRANSFAC yes 118331620
SNP sites on vista2518[chr1:94429275-94429464]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 94429282 rs187640642 C T
SREBF2
491607
chr1 94429423 rs561371298 C T no 491608
Genes possibly regulated by vista2518[chr1:94429275-94429464]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 94333373 94345474 - DNTTIP2 ENSG00000067334.9 94345474 0.74 0.99 908 16199
chr1 94350761 94374966 - GCLM ENSG00000023909.5 94374966 0.8 0.98 909 45691
Expression level of Genes
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miRNAs possibly regulated by vista2518[chr1:94429275-94429464]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results