EnhancerDB
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  3. vista25181[chr17:53394900-53394943]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25181[chr17:53394900-53394943]
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Tissue distribution of vista25181
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Transcription factor that possibly regulate vista25181[chr17:53394900-53394943]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 53394884 53394902 RARA JASPAR yes 21257188
chr17 53394884 53394902 RARA JASPAR yes 54843472
chr17 53394897 53394912 ZIC3 JASPAR yes 21257189
chr17 53394897 53394912 ZIC3 JASPAR yes 54843474
chr17 53394901 53394910 SNAI2 JASPAR yes 21257190
chr17 53394901 53394910 SNAI2 JASPAR yes 54843475
chr17 53394901 53394911 TCF3 JASPAR yes 21257191
chr17 53394901 53394911 TCF4 JASPAR yes 21257192
chr17 53394901 53394911 TCF3 JASPAR yes 54843476
chr17 53394901 53394911 TCF4 JASPAR yes 54843477
chr17 53394903 53394912 ZEB1 JASPAR yes 21257193
chr17 53394903 53394912 ZEB1 JASPAR yes 54843478
chr17 53394905 53394910 SP1 TRANSFAC yes 21257194
chr17 53394905 53394910 SP1 TRANSFAC yes 54843479
chr17 53394907 53394912 TFAP2A TRANSFAC yes 21257195
chr17 53394907 53394912 TFAP2A TRANSFAC yes 54843480
chr17 53394907 53394913 MZF1 JASPAR yes 21257196
chr17 53394907 53394913 MZF1 JASPAR yes 54843481
chr17 53394908 53394918 SP1 JASPAR yes 21257197
chr17 53394908 53394918 SP1 JASPAR yes 54843482
chr17 53394915 53394919 LFA1 TRANSFAC yes 21257198
chr17 53394915 53394919 LFA1 TRANSFAC yes 54843483
chr17 53394932 53394944 PKNOX1 JASPAR yes 21257199
chr17 53394932 53394944 PKNOX2 JASPAR yes 21257200
chr17 53394932 53394944 TGIF1 JASPAR yes 21257201
chr17 53394932 53394944 PKNOX1 JASPAR yes 54843484
chr17 53394932 53394944 PKNOX2 JASPAR yes 54843485
chr17 53394932 53394944 TGIF1 JASPAR yes 54843486
chr17 53394933 53394943 ID4 JASPAR yes 21257202
chr17 53394933 53394943 ID4 JASPAR yes 54843487
chr17 53394937 53394948 ESRRA JASPAR yes 21257203
chr17 53394937 53394948 ESRRA JASPAR yes 54843488
chr17 53394940 53394956 SOX8 JASPAR yes 21257204
chr17 53394940 53394956 SOX8 JASPAR yes 54843489
SNP sites on vista25181[chr17:53394900-53394943]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista25181[chr17:53394900-53394943]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 53342373 53402426 + HLF ENSG00000108924.9 53342373 0.87 0.94 16060 47473
Expression level of Genes
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miRNAs possibly regulated by vista25181[chr17:53394900-53394943]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results