EnhancerDB
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  3. vista25182[chr17:53457178-53457442]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25182[chr17:53457178-53457442]
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Tissue distribution of vista25182
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Transcription factor that possibly regulate vista25182[chr17:53457178-53457442]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 53457179 53457194 FOXP1 JASPAR yes 21257205
chr17 53457180 53457186 TBP TRANSFAC yes 21257206
chr17 53457180 53457195 FOXP1 JASPAR yes 21257207
chr17 53457180 53457201 IRF1 JASPAR yes 21257208
chr17 53457181 53457196 FOXP1 JASPAR yes 21257209
chr17 53457181 53457202 IRF1 JASPAR yes 21257210
chr17 53457182 53457197 FOXP1 JASPAR yes 21257211
chr17 53457182 53457203 IRF1 JASPAR yes 21257212
chr17 53457183 53457198 FOXP1 JASPAR yes 21257213
chr17 53457183 53457204 IRF1 JASPAR yes 21257214
chr17 53457184 53457199 FOXP1 JASPAR yes 21257215
chr17 53457184 53457205 IRF1 JASPAR yes 21257216
chr17 53457185 53457200 FOXP1 JASPAR yes 21257217
chr17 53457187 53457202 FOXP1 JASPAR yes 21257218
chr17 53457200 53457218 NR3C1 JASPAR yes 21257219
chr17 53457202 53457208 SOX10 JASPAR yes 21257220
chr17 53457205 53457210 ETS2 TRANSFAC yes 21257221
chr17 53457223 53457244 IRF1 JASPAR yes 21257222
chr17 53457249 53457265 POU4F2 JASPAR yes 21257223
chr17 53457249 53457265 POU4F3 JASPAR yes 21257224
chr17 53457251 53457265 POU4F1 JASPAR yes 21257225
chr17 53457252 53457262 GSX1 JASPAR yes 21257226
chr17 53457252 53457262 GSX2 JASPAR yes 21257227
chr17 53457253 53457261 LMX1A JASPAR yes 21257228
chr17 53457253 53457261 LMX1B JASPAR yes 21257229
chr17 53457253 53457261 NKX6-1 JASPAR yes 21257230
chr17 53457253 53457261 NKX6-2 JASPAR yes 21257231
chr17 53457253 53457261 VAX1 JASPAR yes 21257232
chr17 53457253 53457261 VAX2 JASPAR yes 21257233
chr17 53457253 53457261 VSX1 JASPAR yes 21257234
chr17 53457253 53457261 VSX2 JASPAR yes 21257235
chr17 53457280 53457291 PHOX2A JASPAR yes 21257236
chr17 53457280 53457291 PROP1 JASPAR yes 21257237
chr17 53457289 53457301 E2F8 JASPAR yes 21257238
chr17 53457290 53457302 INSM1 JASPAR yes 21257239
chr17 53457349 53457363 POU4F1 JASPAR yes 21257240
chr17 53457359 53457363 YY1 TRANSFAC yes 21257241
chr17 53457370 53457390 TP53 JASPAR yes 21257242
chr17 53457372 53457392 TP63 JASPAR yes 21257243
chr17 53457373 53457391 TP53 JASPAR yes 21257244
chr17 53457373 53457391 TP73 JASPAR yes 21257245
chr17 53457374 53457389 TP53 JASPAR yes 21257246
chr17 53457377 53457381 H4TF2 TRANSFAC yes 21257247
chr17 53457393 53457397 H1TF2 TRANSFAC yes 21257248
chr17 53457393 53457397 NFE TRANSFAC yes 21257249
chr17 53457393 53457397 SRF TRANSFAC yes 21257250
chr17 53457420 53457424 YY1 TRANSFAC yes 21257251
chr17 53457427 53457442 HSF1 JASPAR yes 21257252
chr17 53457428 53457441 HSF1 JASPAR yes 21257253
chr17 53457428 53457441 HSF2 JASPAR yes 21257254
chr17 53457428 53457441 HSF4 JASPAR yes 21257255
SNP sites on vista25182[chr17:53457178-53457442]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 53457311 rs183318662 G A no 4938950
chr17 53457321 rs563019703 T C no 4938951
chr17 53457348 rs9912508 C T no 4938952
chr17 53457349 rs549234215 C T
POU4F1
4938953
chr17 53457431 rs534471485 C T
HSF1 HSF2 HSF4
4938954
Genes possibly regulated by vista25182[chr17:53457178-53457442]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 53469974 53499353 - MMD ENSG00000108960.3 53499353 0.74 0.98 16061 58089
Expression level of Genes
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miRNAs possibly regulated by vista25182[chr17:53457178-53457442]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results