EnhancerDB
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  3. vista25183[chr17:53494121-53494283]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25183[chr17:53494121-53494283]
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Tissue distribution of vista25183
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Transcription factor that possibly regulate vista25183[chr17:53494121-53494283]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 53494121 53494139 SRF JASPAR yes 21257256
chr17 53494121 53494139 SRF JASPAR yes 54848648
chr17 53494124 53494136 SRF JASPAR yes 21257257
chr17 53494124 53494136 SRF JASPAR yes 54848649
chr17 53494125 53494129 YY1 TRANSFAC yes 21257258
chr17 53494125 53494129 YY1 TRANSFAC yes 54848650
chr17 53494140 53494155 MEF2A JASPAR yes 21257259
chr17 53494140 53494155 MEF2A JASPAR yes 54848651
chr17 53494142 53494154 MEF2A JASPAR yes 21257260
chr17 53494142 53494154 MEF2B JASPAR yes 21257261
chr17 53494142 53494154 MEF2D JASPAR yes 21257262
chr17 53494142 53494154 MEF2A JASPAR yes 54848652
chr17 53494142 53494154 MEF2B JASPAR yes 54848653
chr17 53494142 53494154 MEF2D JASPAR yes 54848654
chr17 53494143 53494153 MEF2A JASPAR yes 21257263
chr17 53494143 53494153 MEF2A JASPAR yes 54848655
chr17 53494144 53494148 YY1 TRANSFAC yes 21257264
chr17 53494144 53494148 YY1 TRANSFAC yes 54848656
chr17 53494163 53494172 VENTX JASPAR yes 21257265
chr17 53494163 53494172 VENTX JASPAR yes 54848657
chr17 53494169 53494179 CEBPG JASPAR yes 21257266
chr17 53494169 53494179 CEBPG JASPAR yes 54848658
chr17 53494182 53494188 JUN TRANSFAC yes 21257267
chr17 53494182 53494188 JUN TRANSFAC yes 54848659
chr17 53494186 53494189 MYB TRANSFAC yes 21257268
chr17 53494186 53494189 MYB TRANSFAC yes 54848660
chr17 53494205 53494222 RXRA JASPAR yes 21257269
chr17 53494205 53494222 RXRA JASPAR yes 54848661
chr17 53494211 53494216 ETS2 TRANSFAC yes 21257270
chr17 53494211 53494216 ETS2 TRANSFAC yes 54848662
chr17 53494211 53494219 EHF JASPAR yes 21257271
chr17 53494211 53494219 EHF JASPAR yes 54848663
chr17 53494213 53494227 JUN JASPAR yes 21257272
chr17 53494213 53494227 JUN JASPAR yes 54848664
chr17 53494215 53494233 NR3C1 JASPAR yes 21257273
chr17 53494215 53494233 NR3C1 JASPAR yes 54848665
chr17 53494216 53494227 FOSL2 JASPAR yes 21257274
chr17 53494216 53494227 JUNB JASPAR yes 21257275
chr17 53494216 53494227 FOSL2 JASPAR yes 54848666
chr17 53494216 53494227 JUNB JASPAR yes 54848667
chr17 53494216 53494231 ESR2 JASPAR yes 21257276
chr17 53494216 53494231 ESR2 JASPAR yes 54848668
chr17 53494219 53494230 BATF JASPAR yes 21257277
chr17 53494219 53494230 BATF JASPAR yes 54848669
chr17 53494243 53494252 NKX3-2 JASPAR yes 21257278
chr17 53494243 53494252 NKX3-2 JASPAR yes 54848670
chr17 53494244 53494252 ISL2 JASPAR yes 21257279
chr17 53494244 53494252 ISL2 JASPAR yes 54848671
chr17 53494259 53494269 HMBOX1 JASPAR yes 21257280
chr17 53494259 53494269 HMBOX1 JASPAR yes 54848672
chr17 53494273 53494288 FOXP1 JASPAR yes 21257281
chr17 53494273 53494288 FOXP1 JASPAR yes 54848673
chr17 53494278 53494292 JUN JASPAR yes 21257282
chr17 53494278 53494292 JUN JASPAR yes 54848674
chr17 53494279 53494290 BATF JASPAR yes 21257283
chr17 53494279 53494290 BATF JASPAR yes 54848675
SNP sites on vista25183[chr17:53494121-53494283]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista25183[chr17:53494121-53494283]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 53469974 53499353 - MMD ENSG00000108960.3 53499353 0.74 0.98 16061 94930
Expression level of Genes
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miRNAs possibly regulated by vista25183[chr17:53494121-53494283]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results