EnhancerDB
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  3. vista25191[chr17:53661870-53662078]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25191[chr17:53661870-53662078]
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Tissue distribution of vista25191
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Transcription factor that possibly regulate vista25191[chr17:53661870-53662078]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 53661851 53661870 CTCF JASPAR yes 21257653
chr17 53661851 53661870 CTCF JASPAR yes 54862409
chr17 53661896 53661910 RORA JASPAR yes 21257654
chr17 53661896 53661910 RORA JASPAR yes 54862412
chr17 53661916 53661928 HLF JASPAR yes 21257655
chr17 53661916 53661928 HLF JASPAR yes 54862413
chr17 53661917 53661927 CEBPB JASPAR yes 21257656
chr17 53661917 53661927 CEBPD JASPAR yes 21257657
chr17 53661917 53661927 CEBPE JASPAR yes 21257658
chr17 53661917 53661927 CEBPG JASPAR yes 21257659
chr17 53661917 53661927 CEBPB JASPAR yes 54862414
chr17 53661917 53661927 CEBPD JASPAR yes 54862415
chr17 53661917 53661927 CEBPE JASPAR yes 54862416
chr17 53661917 53661927 CEBPG JASPAR yes 54862417
chr17 53661948 53661960 DBP JASPAR yes 21257660
chr17 53661948 53661960 HLF JASPAR yes 21257661
chr17 53661948 53661960 DBP JASPAR yes 54862418
chr17 53661948 53661960 HLF JASPAR yes 54862419
chr17 53661953 53661957 TEAD2 TRANSFAC yes 21257662
chr17 53661953 53661957 TEAD2 TRANSFAC yes 54862420
chr17 53661953 53661967 POU4F1 JASPAR yes 21257663
chr17 53661953 53661967 POU4F1 JASPAR yes 54862421
chr17 53661953 53661969 POU4F2 JASPAR yes 21257664
chr17 53661953 53661969 POU4F3 JASPAR yes 21257665
chr17 53661953 53661969 SOX8 JASPAR yes 21257666
chr17 53661953 53661969 POU4F2 JASPAR yes 54862422
chr17 53661953 53661969 POU4F3 JASPAR yes 54862423
chr17 53661953 53661969 SOX8 JASPAR yes 54862424
chr17 53661954 53661966 HNF1B JASPAR yes 21257667
chr17 53661954 53661966 HNF1B JASPAR yes 54862425
chr17 53661958 53661962 YY1 TRANSFAC yes 21257668
chr17 53661958 53661962 YY1 TRANSFAC yes 54862426
chr17 53661991 53661995 TEAD2 TRANSFAC yes 21257669
chr17 53661991 53661995 TEAD2 TRANSFAC yes 54862427
chr17 53661991 53661996 TBP TRANSFAC yes 21257670
chr17 53661991 53661996 TBP TRANSFAC yes 54862428
chr17 53662001 53662012 CDX2 JASPAR yes 21257671
chr17 53662001 53662012 CDX2 JASPAR yes 54862429
chr17 53662002 53662013 HOXA10 JASPAR yes 21257672
chr17 53662002 53662013 HOXA10 JASPAR yes 54862430
chr17 53662003 53662012 CDX1 JASPAR yes 21257673
chr17 53662003 53662012 CDX1 JASPAR yes 54862431
chr17 53662003 53662013 HOXA13 JASPAR yes 21257674
chr17 53662003 53662013 HOXB13 JASPAR yes 21257675
chr17 53662003 53662013 HOXD13 JASPAR yes 21257676
chr17 53662003 53662013 HOXA13 JASPAR yes 54862432
chr17 53662003 53662013 HOXB13 JASPAR yes 54862433
chr17 53662003 53662013 HOXD13 JASPAR yes 54862434
chr17 53662027 53662042 HNF1A JASPAR yes 21257677
chr17 53662027 53662042 HNF1A JASPAR yes 54862435
chr17 53662028 53662041 HNF1B JASPAR yes 21257678
chr17 53662028 53662041 HNF1B JASPAR yes 54862436
chr17 53662044 53662049 GATA2 JASPAR yes 21257679
chr17 53662044 53662049 GATA2 JASPAR yes 54862437
chr17 53662050 53662064 PLAG1 JASPAR yes 21257680
chr17 53662050 53662064 PLAG1 JASPAR yes 54862438
chr17 53662052 53662062 SP1 JASPAR yes 21257681
chr17 53662052 53662062 SP1 JASPAR yes 54862439
SNP sites on vista25191[chr17:53661870-53662078]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 53661954 rs190592264 T G
DBP HLF HNF1B POU4F1 POU4F2 POU4F3 SOX8 TEAD2
4940403
chr17 53661959 rs1395358 T C
DBP HLF HNF1B POU4F1 POU4F2 POU4F3 SOX8 YY1
4940404
chr17 53662021 rs55949491 T C no 4940405
chr17 53662051 rs116481143 C T
PLAG1
4940406
chr17 53662060 rs146625751 C A
PLAG1 SP1
4940407
Genes possibly regulated by vista25191[chr17:53661870-53662078]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25191[chr17:53661870-53662078]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results