EnhancerDB
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  3. vista252[chr1:8499087-8499228]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista252[chr1:8499087-8499228]
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Tissue distribution of vista252
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Transcription factor that possibly regulate vista252[chr1:8499087-8499228]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 8499141 8499160 RFX2 JASPAR yes 26554331
chr1 8499141 8499160 RFX2 JASPAR yes 118225404
chr1 8499143 8499158 RFX5 JASPAR yes 26554332
chr1 8499143 8499158 RFX5 JASPAR yes 118225405
chr1 8499145 8499164 RFX2 JASPAR yes 26554333
chr1 8499145 8499164 RFX2 JASPAR yes 118225406
chr1 8499158 8499177 CTCF JASPAR yes 26554334
chr1 8499158 8499177 CTCF JASPAR yes 118225407
chr1 8499163 8499177 SPI1 JASPAR yes 26554335
chr1 8499163 8499177 SPI1 JASPAR yes 118225408
chr1 8499164 8499174 MZF1 JASPAR yes 26554336
chr1 8499164 8499174 MZF1 JASPAR yes 118225409
chr1 8499169 8499174 ETS2 TRANSFAC yes 26554337
chr1 8499169 8499174 ETS2 TRANSFAC yes 118225410
chr1 8499177 8499196 REST JASPAR yes 26554338
chr1 8499177 8499196 REST JASPAR yes 118225411
chr1 8499180 8499191 NRL JASPAR yes 26554339
chr1 8499180 8499191 NRL JASPAR yes 118225412
chr1 8499187 8499201 TLX1 JASPAR yes 26554340
chr1 8499187 8499201 TLX1 JASPAR yes 118225413
chr1 8499191 8499197 GATA3 JASPAR yes 26554341
chr1 8499191 8499197 GATA3 JASPAR yes 118225414
chr1 8499224 8499232 MEIS2 JASPAR yes 26554342
chr1 8499224 8499232 MEIS2 JASPAR yes 118225415
chr1 8499225 8499229 NFE TRANSFAC yes 26554343
chr1 8499225 8499229 NFE TRANSFAC yes 118225416
chr1 8499225 8499232 MEIS1 JASPAR yes 26554344
chr1 8499225 8499232 MEIS1 JASPAR yes 118225417
SNP sites on vista252[chr1:8499087-8499228]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista252[chr1:8499087-8499228]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista252[chr1:8499087-8499228]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results