EnhancerDB
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  3. vista25200[chr17:54655252-54655609]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25200[chr17:54655252-54655609]
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Tissue distribution of vista25200
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Transcription factor that possibly regulate vista25200[chr17:54655252-54655609]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54655246 54655256 NFIA JASPAR yes 21257944
chr17 54655246 54655256 NFIA JASPAR yes 54897659
chr17 54655247 54655256 NFIX JASPAR yes 21257945
chr17 54655247 54655256 NFIX JASPAR yes 54897660
chr17 54655248 54655254 NFIC JASPAR yes 21257946
chr17 54655248 54655254 NFIC JASPAR yes 54897661
chr17 54655271 54655276 MYB TRANSFAC yes 21257947
chr17 54655271 54655276 MYB TRANSFAC yes 54897662
chr17 54655291 54655303 INSM1 JASPAR yes 21257948
chr17 54655291 54655303 INSM1 JASPAR yes 54897663
chr17 54655297 54655308 NRF1 JASPAR yes 21257949
chr17 54655297 54655308 NRF1 JASPAR yes 54897664
chr17 54655298 54655302 LFA1 TRANSFAC yes 21257950
chr17 54655298 54655302 LFA1 TRANSFAC yes 54897665
chr17 54655306 54655316 ZNF740 JASPAR yes 21257951
chr17 54655306 54655316 ZNF740 JASPAR yes 54897666
chr17 54655315 54655327 HINFP JASPAR yes 21257952
chr17 54655315 54655327 HINFP JASPAR yes 54897667
chr17 54655319 54655329 SP1 JASPAR yes 21257953
chr17 54655319 54655329 SP1 JASPAR yes 54897668
chr17 54655320 54655330 SP1 JASPAR yes 21257954
chr17 54655320 54655330 SP1 JASPAR yes 54897669
chr17 54655321 54655326 SP1 TRANSFAC yes 21257955
chr17 54655321 54655326 SP1 TRANSFAC yes 54897670
chr17 54655322 54655327 SP1 TRANSFAC yes 21257956
chr17 54655322 54655327 SP1 TRANSFAC yes 54897671
chr17 54655322 54655328 SP1 TRANSFAC yes 21257957
chr17 54655322 54655328 SP1 TRANSFAC yes 54897672
chr17 54655324 54655334 SP1 JASPAR yes 21257958
chr17 54655324 54655334 SP1 JASPAR yes 54897673
chr17 54655325 54655335 SP1 JASPAR yes 21257959
chr17 54655325 54655335 SP1 JASPAR yes 54897674
chr17 54655326 54655332 MAZ TRANSFAC yes 21257960
chr17 54655326 54655332 MAZ TRANSFAC yes 54897675
chr17 54655326 54655336 SP1 JASPAR yes 21257961
chr17 54655326 54655336 SP1 JASPAR yes 54897676
chr17 54655331 54655341 SP1 JASPAR yes 21257962
chr17 54655331 54655341 SP1 JASPAR yes 54897677
chr17 54655338 54655342 LFA1 TRANSFAC yes 21257963
chr17 54655338 54655342 LFA1 TRANSFAC yes 54897678
chr17 54655353 54655368 MEF2A JASPAR yes 21257964
chr17 54655353 54655368 MEF2A JASPAR yes 54897679
chr17 54655354 54655369 MEF2C JASPAR yes 21257965
chr17 54655354 54655369 MEF2C JASPAR yes 54897680
chr17 54655355 54655367 MEF2A JASPAR yes 21257966
chr17 54655355 54655367 MEF2B JASPAR yes 21257967
chr17 54655355 54655367 MEF2D JASPAR yes 21257968
chr17 54655355 54655367 MEF2A JASPAR yes 54897681
chr17 54655355 54655367 MEF2B JASPAR yes 54897682
chr17 54655355 54655367 MEF2D JASPAR yes 54897683
chr17 54655356 54655366 MEF2A JASPAR yes 21257969
chr17 54655356 54655366 MEF2A JASPAR yes 54897684
chr17 54655357 54655361 YY1 TRANSFAC yes 21257970
chr17 54655357 54655361 YY1 TRANSFAC yes 54897685
chr17 54655381 54655387 ZNF354C JASPAR yes 21257971
chr17 54655381 54655387 ZNF354C JASPAR yes 54897686
chr17 54655384 54655399 RUNX2 JASPAR yes 21257972
chr17 54655384 54655399 RUNX2 JASPAR yes 54897687
chr17 54655405 54655423 RARA JASPAR yes 21257973
chr17 54655405 54655423 RARA JASPAR yes 54897688
chr17 54655427 54655441 BATF3 JASPAR yes 21257974
chr17 54655427 54655441 BATF3 JASPAR yes 54897689
chr17 54655429 54655444 FOXP1 JASPAR yes 21257975
chr17 54655429 54655444 FOXP1 JASPAR yes 54897690
chr17 54655434 54655442 FOXG1 JASPAR yes 21257976
chr17 54655434 54655442 FOXG1 JASPAR yes 54897691
chr17 54655436 54655442 HiNF-A TRANSFAC yes 21257977
chr17 54655436 54655442 HiNF-A TRANSFAC yes 54897692
chr17 54655443 54655447 LFA1 TRANSFAC yes 21257978
chr17 54655443 54655447 LFA1 TRANSFAC yes 54897693
chr17 54655458 54655469 E2F1 JASPAR yes 21257979
chr17 54655458 54655469 E2F1 JASPAR yes 54897694
chr17 54655458 54655470 E2F1 JASPAR yes 21257980
chr17 54655458 54655470 E2F1 JASPAR yes 54897695
chr17 54655490 54655494 LFA1 TRANSFAC yes 21257981
chr17 54655490 54655494 LFA1 TRANSFAC yes 54897696
chr17 54655493 54655510 ZNF410 JASPAR yes 21257982
chr17 54655493 54655510 ZNF410 JASPAR yes 54897697
chr17 54655499 54655504 SP1 TRANSFAC yes 21257983
chr17 54655499 54655504 SP1 TRANSFAC yes 54897698
chr17 54655500 54655510 SP1 JASPAR yes 21257984
chr17 54655500 54655510 SP1 JASPAR yes 54897699
chr17 54655541 54655561 RREB1 JASPAR yes 21257985
chr17 54655541 54655561 RREB1 JASPAR yes 54897700
chr17 54655541 54655562 ZNF263 JASPAR yes 21257986
chr17 54655541 54655562 ZNF263 JASPAR yes 54897701
chr17 54655544 54655564 RREB1 JASPAR yes 21257987
chr17 54655544 54655564 RREB1 JASPAR yes 54897702
chr17 54655545 54655565 RREB1 JASPAR yes 21257988
chr17 54655545 54655565 RREB1 JASPAR yes 54897703
chr17 54655546 54655556 SP1 JASPAR yes 21257989
chr17 54655546 54655556 SP1 JASPAR yes 54897704
chr17 54655548 54655558 ZNF740 JASPAR yes 21257990
chr17 54655548 54655558 ZNF740 JASPAR yes 54897705
chr17 54655551 54655572 ZNF263 JASPAR yes 21257991
chr17 54655551 54655572 ZNF263 JASPAR yes 54897706
chr17 54655552 54655562 SP1 JASPAR yes 21257992
chr17 54655552 54655562 SP1 JASPAR yes 54897707
chr17 54655555 54655567 INSM1 JASPAR yes 21257993
chr17 54655555 54655567 INSM1 JASPAR yes 54897708
chr17 54655581 54655596 RUNX2 JASPAR yes 21257994
chr17 54655581 54655596 RUNX2 JASPAR yes 54897709
chr17 54655582 54655592 RUNX3 JASPAR yes 21257995
chr17 54655582 54655592 RUNX3 JASPAR yes 54897710
chr17 54655582 54655593 RUNX1 JASPAR yes 21257996
chr17 54655582 54655593 RUNX1 JASPAR yes 54897711
SNP sites on vista25200[chr17:54655252-54655609]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54655312 rs534623685 G C
ZNF740
4943608
chr17 54655553 rs77969246 C T
RREB1 SP1 ZNF263 ZNF740
4943609
chr17 54655585 rs560012977 A G
RUNX1 RUNX2 RUNX3
4943610
Genes possibly regulated by vista25200[chr17:54655252-54655609]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54671060 54672951 + NOG ENSG00000183691.4 54671060 0.91 0.92 16065 84549
Expression level of Genes
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miRNAs possibly regulated by vista25200[chr17:54655252-54655609]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results