EnhancerDB
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  3. vista25202[chr17:54674985-54675165]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25202[chr17:54674985-54675165]
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Tissue distribution of vista25202
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Transcription factor that possibly regulate vista25202[chr17:54674985-54675165]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54674991 54675001 MZF1 JASPAR yes 21258033
chr17 54674991 54675001 MZF1 JASPAR yes 54898265
chr17 54674994 54675000 SP1 TRANSFAC yes 21258034
chr17 54674994 54675000 SP1 TRANSFAC yes 54898266
chr17 54675004 54675009 SP1 TRANSFAC yes 21258035
chr17 54675004 54675009 SP1 TRANSFAC yes 54898267
chr17 54675008 54675014 SP1 TRANSFAC yes 21258036
chr17 54675008 54675014 SP1 TRANSFAC yes 54898268
chr17 54675008 54675018 SP1 JASPAR yes 21258037
chr17 54675008 54675018 SP1 JASPAR yes 54898269
chr17 54675026 54675033 SP1 TRANSFAC yes 21258038
chr17 54675026 54675033 SP1 TRANSFAC yes 54898270
chr17 54675028 54675033 SP1 TRANSFAC yes 21258039
chr17 54675028 54675033 SP1 TRANSFAC yes 54898271
chr17 54675030 54675037 SP1 TRANSFAC yes 21258040
chr17 54675030 54675037 SP1 TRANSFAC yes 54898272
chr17 54675032 54675037 SP1 TRANSFAC yes 21258041
chr17 54675032 54675037 SP1 TRANSFAC yes 54898273
chr17 54675032 54675043 NRF1 JASPAR yes 21258042
chr17 54675032 54675043 NRF1 JASPAR yes 54898274
chr17 54675041 54675047 SP1 TRANSFAC yes 21258043
chr17 54675041 54675047 SP1 TRANSFAC yes 54898275
chr17 54675041 54675051 SP1 JASPAR yes 21258044
chr17 54675041 54675051 SP1 JASPAR yes 54898276
chr17 54675043 54675064 ZNF263 JASPAR yes 21258045
chr17 54675043 54675064 ZNF263 JASPAR yes 54898277
chr17 54675048 54675054 MZF1 JASPAR yes 21258046
chr17 54675048 54675054 MZF1 JASPAR yes 54898278
chr17 54675055 54675065 SP1 JASPAR yes 21258047
chr17 54675055 54675065 SP1 JASPAR yes 54898279
chr17 54675060 54675070 NKX2-3 JASPAR yes 21258048
chr17 54675060 54675070 NKX2-3 JASPAR yes 54898280
chr17 54675066 54675073 NFATC2 JASPAR yes 21258049
chr17 54675066 54675073 NFATC2 JASPAR yes 54898281
chr17 54675066 54675077 NFKB1 JASPAR yes 21258050
chr17 54675066 54675077 NFKB1 JASPAR yes 54898282
chr17 54675067 54675077 RELA JASPAR yes 21258051
chr17 54675067 54675077 REL JASPAR yes 21258052
chr17 54675067 54675077 RELA JASPAR yes 54898283
chr17 54675067 54675077 REL JASPAR yes 54898284
chr17 54675074 54675079 SP1 TRANSFAC yes 21258053
chr17 54675074 54675079 SP1 TRANSFAC yes 54898285
chr17 54675074 54675083 THAP1 JASPAR yes 21258054
chr17 54675074 54675083 THAP1 JASPAR yes 54898286
chr17 54675075 54675087 TFAP2A JASPAR yes 21258055
chr17 54675075 54675087 TFAP2A JASPAR yes 54898287
chr17 54675141 54675155 BATF3 JASPAR yes 21258056
chr17 54675141 54675155 BATF3 JASPAR yes 54898288
chr17 54675153 54675166 SMAD2 JASPAR yes 21258057
chr17 54675153 54675166 SMAD2 JASPAR yes 54898289
SNP sites on vista25202[chr17:54674985-54675165]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54675006 rs535220277 C A
SP1
4943659
chr17 54675155 rs553334306 G T
BATF3 SMAD2
4943660
Genes possibly regulated by vista25202[chr17:54674985-54675165]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54671060 54672951 + NOG ENSG00000183691.4 54671060 0.91 0.92 16065 96075
Expression level of Genes
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miRNAs possibly regulated by vista25202[chr17:54674985-54675165]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 54968642 54968664 - hsa-miR-3614-3p MIMAT0017993 54991408 0.14506781728607782 0.932496 0.676023 722
Expression level of miRNAs
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