EnhancerDB
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  3. vista25205[chr17:54855339-54855522]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25205[chr17:54855339-54855522]
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Tissue distribution of vista25205
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Transcription factor that possibly regulate vista25205[chr17:54855339-54855522]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54855361 54855378 RXRA JASPAR yes 21258158
chr17 54855361 54855378 RXRA JASPAR yes 54911903
chr17 54855376 54855384 EHF JASPAR yes 21258159
chr17 54855376 54855384 EHF JASPAR yes 54911904
chr17 54855380 54855385 ETS2 TRANSFAC yes 21258160
chr17 54855380 54855385 ETS2 TRANSFAC yes 54911905
chr17 54855395 54855399 ESR1 TRANSFAC yes 21258161
chr17 54855395 54855399 ESR1 TRANSFAC yes 54911906
chr17 54855400 54855411 NFE2L2 JASPAR yes 21258162
chr17 54855400 54855411 NFE2L2 JASPAR yes 54911907
chr17 54855400 54855413 ATF4 JASPAR yes 21258163
chr17 54855400 54855413 ATF4 JASPAR yes 54911908
chr17 54855409 54855415 ZNF354C JASPAR yes 21258164
chr17 54855409 54855415 ZNF354C JASPAR yes 54911909
chr17 54855413 54855423 GABPA JASPAR yes 21258165
chr17 54855413 54855423 GABPA JASPAR yes 54911910
chr17 54855413 54855424 FLI1 JASPAR yes 21258166
chr17 54855413 54855424 FLI1 JASPAR yes 54911911
chr17 54855436 54855451 ZIC4 JASPAR yes 21258167
chr17 54855436 54855451 ZIC4 JASPAR yes 54911912
chr17 54855437 54855451 ZIC1 JASPAR yes 21258168
chr17 54855437 54855451 ZIC1 JASPAR yes 54911913
chr17 54855438 54855454 GLIS1 JASPAR yes 21258169
chr17 54855438 54855454 GLIS1 JASPAR yes 54911914
chr17 54855454 54855469 HNF4A JASPAR yes 21258170
chr17 54855454 54855469 HNF4A JASPAR yes 54911915
chr17 54855455 54855470 HNF4G JASPAR yes 21258171
chr17 54855455 54855470 LEF1 JASPAR yes 21258172
chr17 54855455 54855470 HNF4G JASPAR yes 54911916
chr17 54855455 54855470 LEF1 JASPAR yes 54911917
chr17 54855466 54855487 IRF1 JASPAR yes 21258173
chr17 54855466 54855487 IRF1 JASPAR yes 54911918
chr17 54855468 54855483 STAT2 JASPAR yes 21258174
chr17 54855468 54855483 STAT2 JASPAR yes 54911919
chr17 54855469 54855483 STAT1 JASPAR yes 21258175
chr17 54855469 54855483 STAT1 JASPAR yes 54911920
chr17 54855484 54855496 FOXI1 JASPAR yes 21258176
chr17 54855484 54855496 FOXI1 JASPAR yes 54911921
chr17 54855487 54855491 YY1 TRANSFAC yes 21258177
chr17 54855487 54855491 YY1 TRANSFAC yes 54911922
chr17 54855493 54855498 GATA2 JASPAR yes 21258178
chr17 54855493 54855498 GATA2 JASPAR yes 54911923
chr17 54855512 54855527 JUND JASPAR yes 21258179
chr17 54855512 54855527 JUND JASPAR yes 54911924
chr17 54855513 54855526 JUN JASPAR yes 21258180
chr17 54855513 54855526 JUN JASPAR yes 54911925
chr17 54855520 54855524 YY1 TRANSFAC yes 21258181
chr17 54855520 54855524 YY1 TRANSFAC yes 54911926
chr17 54855522 54855530 BARX1 JASPAR yes 21258182
chr17 54855522 54855530 BARX1 JASPAR yes 54911927
SNP sites on vista25205[chr17:54855339-54855522]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54855443 rs573880201 C T
GLIS1 ZIC1 ZIC4
4945032
chr17 54855502 rs540913248 C T no 4945033
Genes possibly regulated by vista25205[chr17:54855339-54855522]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54869274 54916134 - C17orf67 ENSG00000214226.4 54916134 0.84 0.98 16066 39388
chr17 54911460 54946036 + DGKE ENSG00000153933.5 54911460 0.76 0.98 16067 44062
Expression level of Genes
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miRNAs possibly regulated by vista25205[chr17:54855339-54855522]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results