EnhancerDB
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  3. vista25207[chr17:54857525-54857918]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25207[chr17:54857525-54857918]
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Tissue distribution of vista25207
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Transcription factor that possibly regulate vista25207[chr17:54857525-54857918]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54857572 54857928 CTCF UCSC Txn Factor no Conserved 108273199
chr17 54857580 54858005 E2F1 UCSC Txn Factor no Conserved 108273203
chr17 54857598 54857873 RAD21 UCSC Txn Factor no Conserved 108273208
chr17 54857617 54857919 SMC3 UCSC Txn Factor no Conserved 108273217
chr17 54857517 54857529 TEAD1 JASPAR yes 21258203
chr17 54857517 54857529 TEAD1 JASPAR yes 54912155
chr17 54857519 54857529 TEAD1 JASPAR yes 21258204
chr17 54857519 54857529 TEAD4 JASPAR yes 21258205
chr17 54857519 54857529 TEAD1 JASPAR yes 54912156
chr17 54857519 54857529 TEAD4 JASPAR yes 54912157
chr17 54857520 54857528 TEAD3 JASPAR yes 21258206
chr17 54857520 54857528 TEAD3 JASPAR yes 54912158
chr17 54857537 54857552 MYBL2 JASPAR yes 21258207
chr17 54857537 54857552 MYBL2 JASPAR yes 54912159
chr17 54857544 54857547 MYB TRANSFAC yes 21258208
chr17 54857544 54857547 MYB TRANSFAC yes 54912160
chr17 54857549 54857563 SPI1 JASPAR yes 21258209
chr17 54857549 54857563 SPI1 JASPAR yes 54912161
chr17 54857557 54857561 YY1 TRANSFAC yes 21258210
chr17 54857557 54857561 YY1 TRANSFAC yes 54912162
chr17 54857565 54857571 TCF4 TRANSFAC yes 21258211
chr17 54857565 54857571 TCF4 TRANSFAC yes 54912163
chr17 54857585 54857589 YY1 TRANSFAC yes 21258212
chr17 54857585 54857589 YY1 TRANSFAC yes 54912164
chr17 54857587 54857606 RFX2 JASPAR yes 21258213
chr17 54857587 54857606 RFX2 JASPAR yes 54912165
chr17 54857622 54857633 DMRT3 JASPAR yes 21258214
chr17 54857622 54857633 DMRT3 JASPAR yes 54912166
chr17 54857629 54857633 YY1 TRANSFAC yes 21258215
chr17 54857629 54857633 YY1 TRANSFAC yes 54912167
chr17 54857629 54857643 POU4F1 JASPAR yes 21258216
chr17 54857629 54857643 POU4F1 JASPAR yes 54912168
chr17 54857630 54857640 GSX1 JASPAR yes 21258217
chr17 54857630 54857640 GSX2 JASPAR yes 21258218
chr17 54857630 54857640 LHX2 JASPAR yes 21258219
chr17 54857630 54857640 LHX6 JASPAR yes 21258220
chr17 54857630 54857640 MNX1 JASPAR yes 21258221
chr17 54857630 54857640 NOTO JASPAR yes 21258222
chr17 54857630 54857640 POU6F1 JASPAR yes 21258223
chr17 54857630 54857640 RAX JASPAR yes 21258224
chr17 54857630 54857640 GSX1 JASPAR yes 54912169
chr17 54857630 54857640 GSX2 JASPAR yes 54912170
chr17 54857630 54857640 LHX2 JASPAR yes 54912171
chr17 54857630 54857640 LHX6 JASPAR yes 54912172
chr17 54857630 54857640 MNX1 JASPAR yes 54912173
chr17 54857630 54857640 NOTO JASPAR yes 54912174
chr17 54857630 54857640 POU6F1 JASPAR yes 54912175
chr17 54857630 54857640 RAX JASPAR yes 54912176
chr17 54857631 54857639 ISX JASPAR yes 21258225
chr17 54857631 54857639 LMX1A JASPAR yes 21258226
chr17 54857631 54857639 LMX1B JASPAR yes 21258227
chr17 54857631 54857639 NKX6-1 JASPAR yes 21258228
chr17 54857631 54857639 NKX6-2 JASPAR yes 21258229
chr17 54857631 54857639 PRRX1 JASPAR yes 21258230
chr17 54857631 54857639 RAX2 JASPAR yes 21258231
chr17 54857631 54857639 SHOX JASPAR yes 21258232
chr17 54857631 54857639 UNCX JASPAR yes 21258233
chr17 54857631 54857639 VAX1 JASPAR yes 21258234
chr17 54857631 54857639 ISX JASPAR yes 54912177
chr17 54857631 54857639 LMX1A JASPAR yes 54912178
chr17 54857631 54857639 LMX1B JASPAR yes 54912179
chr17 54857631 54857639 NKX6-1 JASPAR yes 54912180
chr17 54857631 54857639 NKX6-2 JASPAR yes 54912181
chr17 54857631 54857639 PRRX1 JASPAR yes 54912182
chr17 54857631 54857639 RAX2 JASPAR yes 54912183
chr17 54857631 54857639 SHOX JASPAR yes 54912184
chr17 54857631 54857639 UNCX JASPAR yes 54912185
chr17 54857631 54857639 VAX1 JASPAR yes 54912186
chr17 54857631 54857645 ONECUT3 JASPAR yes 21258235
chr17 54857631 54857645 ONECUT3 JASPAR yes 54912187
chr17 54857632 54857642 PAX3 JASPAR yes 21258236
chr17 54857632 54857642 PAX7 JASPAR yes 21258237
chr17 54857632 54857642 PAX3 JASPAR yes 54912188
chr17 54857632 54857642 PAX7 JASPAR yes 54912189
chr17 54857632 54857643 PHOX2A JASPAR yes 21258238
chr17 54857632 54857643 PROP1 JASPAR yes 21258239
chr17 54857632 54857643 PHOX2A JASPAR yes 54912190
chr17 54857632 54857643 PROP1 JASPAR yes 54912191
chr17 54857645 54857655 HOXA13 JASPAR yes 21258240
chr17 54857645 54857655 HOXA13 JASPAR yes 54912192
chr17 54857655 54857668 ELF1 JASPAR yes 21258241
chr17 54857655 54857668 ELF1 JASPAR yes 54912193
chr17 54857658 54857669 FLI1 JASPAR yes 21258242
chr17 54857658 54857669 FLI1 JASPAR yes 54912194
chr17 54857659 54857667 FEV JASPAR yes 21258243
chr17 54857659 54857667 FEV JASPAR yes 54912195
chr17 54857675 54857679 NFE TRANSFAC yes 21258244
chr17 54857675 54857679 NFE TRANSFAC yes 54912196
chr17 54857675 54857682 MEIS1 JASPAR yes 21258245
chr17 54857675 54857682 MEIS1 JASPAR yes 54912197
chr17 54857680 54857690 MSC JASPAR yes 21258246
chr17 54857680 54857690 MSC JASPAR yes 54912198
chr17 54857685 54857689 NFE TRANSFAC yes 21258247
chr17 54857685 54857689 NFE TRANSFAC yes 54912199
chr17 54857686 54857698 INSM1 JASPAR yes 21258248
chr17 54857686 54857698 INSM1 JASPAR yes 54912200
chr17 54857695 54857706 NRF1 JASPAR yes 21258249
chr17 54857695 54857706 NRF1 JASPAR yes 54912201
chr17 54857697 54857712 NFYB JASPAR yes 21258250
chr17 54857697 54857712 NFYB JASPAR yes 54912202
chr17 54857699 54857705 NFE2 TRANSFAC yes 21258251
chr17 54857699 54857705 NFE2 TRANSFAC yes 54912203
chr17 54857704 54857708 H1TF2 TRANSFAC yes 21258252
chr17 54857704 54857708 NFE TRANSFAC yes 21258253
chr17 54857704 54857708 SRF TRANSFAC yes 21258254
chr17 54857704 54857708 H1TF2 TRANSFAC yes 54912204
chr17 54857704 54857708 NFE TRANSFAC yes 54912205
chr17 54857704 54857708 SRF TRANSFAC yes 54912206
chr17 54857709 54857718 ZEB1 JASPAR yes 21258255
chr17 54857709 54857718 ZEB1 JASPAR yes 54912207
chr17 54857720 54857731 NRF1 JASPAR yes 21258256
chr17 54857720 54857731 NRF1 JASPAR yes 54912208
chr17 54857721 54857729 SP1 TRANSFAC yes 21258257
chr17 54857721 54857729 SP1 TRANSFAC yes 54912209
chr17 54857721 54857732 NRF1 JASPAR yes 21258258
chr17 54857721 54857732 NRF1 JASPAR yes 54912210
chr17 54857726 54857737 NRF1 JASPAR yes 21258259
chr17 54857726 54857737 NRF1 JASPAR yes 54912211
chr17 54857728 54857739 TFAP2A JASPAR yes 21258260
chr17 54857728 54857739 TFAP2B JASPAR yes 21258261
chr17 54857728 54857739 TFAP2C JASPAR yes 21258262
chr17 54857728 54857739 TFAP2A JASPAR yes 54912212
chr17 54857728 54857739 TFAP2B JASPAR yes 54912213
chr17 54857728 54857739 TFAP2C JASPAR yes 54912214
chr17 54857734 54857754 ESR1 JASPAR yes 21258263
chr17 54857734 54857754 ESR1 JASPAR yes 54912215
chr17 54857738 54857756 ESR2 JASPAR yes 21258264
chr17 54857738 54857756 ESR2 JASPAR yes 54912216
chr17 54857739 54857754 ESR2 JASPAR yes 21258265
chr17 54857739 54857754 ESR2 JASPAR yes 54912217
chr17 54857745 54857764 CTCF JASPAR yes 21258266
chr17 54857745 54857764 CTCF JASPAR yes 54912218
chr17 54857786 54857793 SP1 TRANSFAC yes 21258267
chr17 54857786 54857793 SP1 TRANSFAC yes 54912219
chr17 54857788 54857793 SP1 TRANSFAC yes 21258268
chr17 54857788 54857793 SP1 TRANSFAC yes 54912220
chr17 54857794 54857809 ZIC4 JASPAR yes 21258269
chr17 54857794 54857809 ZIC4 JASPAR yes 54912221
chr17 54857796 54857805 TFAP2A JASPAR yes 21258270
chr17 54857796 54857805 TFAP2A JASPAR yes 54912222
chr17 54857801 54857806 SP1 TRANSFAC yes 21258271
chr17 54857801 54857806 SP1 TRANSFAC yes 54912223
chr17 54857849 54857860 FOXH1 JASPAR yes 21258272
chr17 54857849 54857860 FOXH1 JASPAR yes 54912224
chr17 54857857 54857862 SP1 TRANSFAC yes 21258273
chr17 54857857 54857862 SP1 TRANSFAC yes 54912225
chr17 54857857 54857863 SP1 TRANSFAC yes 21258274
chr17 54857857 54857863 SP1 TRANSFAC yes 54912226
chr17 54857887 54857892 SP1 TRANSFAC yes 21258275
chr17 54857887 54857892 SP1 TRANSFAC yes 54912227
chr17 54857889 54857896 SP1 TRANSFAC yes 21258276
chr17 54857889 54857896 SP1 TRANSFAC yes 54912228
chr17 54857890 54857897 SP1 TRANSFAC yes 21258277
chr17 54857890 54857897 SP1 TRANSFAC yes 54912229
chr17 54857891 54857896 SP1 TRANSFAC yes 21258278
chr17 54857891 54857896 SP1 TRANSFAC yes 54912230
chr17 54857891 54857897 SP1 TRANSFAC yes 21258279
chr17 54857891 54857897 SP1 TRANSFAC yes 54912231
SNP sites on vista25207[chr17:54857525-54857918]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54857625 rs181568205 A G
CTCF DMRT3 E2F1 RAD21 SMC3
4945057
chr17 54857639 rs398031151 AT A
CTCF E2F1 GSX1 GSX2 ISX LHX2 LHX6 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 NOTO ONECUT3 PAX3 PAX7 PHOX2A POU4F1 POU6F1 PROP1 PRRX1 RAD21 RAX RAX2 SHOX SMC3 UNCX VAX1
4945058
chr17 54857639 rs538338802 A T
CTCF E2F1 GSX1 GSX2 ISX LHX2 LHX6 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 NOTO ONECUT3 PAX3 PAX7 PHOX2A POU4F1 POU6F1 PROP1 PRRX1 RAD21 RAX RAX2 SHOX SMC3 UNCX VAX1
4945059
chr17 54857639 rs71139936 AT A
CTCF E2F1 GSX1 GSX2 ISX LHX2 LHX6 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 NOTO ONECUT3 PAX3 PAX7 PHOX2A POU4F1 POU6F1 PROP1 PRRX1 RAD21 RAX RAX2 SHOX SMC3 UNCX VAX1
4945060
chr17 54857900 rs143047752 A G
CTCF E2F1 SMC3
4945061
Genes possibly regulated by vista25207[chr17:54857525-54857918]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54869274 54916134 - C17orf67 ENSG00000214226.4 54916134 0.84 0.98 16066 41784
chr17 54911460 54946036 + DGKE ENSG00000153933.5 54911460 0.76 0.98 16067 46458
Expression level of Genes
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miRNAs possibly regulated by vista25207[chr17:54857525-54857918]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results