EnhancerDB
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  3. vista25212[chr17:54987224-54987877]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25212[chr17:54987224-54987877]
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Tissue distribution of vista25212
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Transcription factor that possibly regulate vista25212[chr17:54987224-54987877]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54987628 54987908 NR2F2 UCSC Txn Factor no Conserved 108273414
chr17 54987673 54987874 RXRA UCSC Txn Factor no Conserved 108273421
chr17 54987235 54987241 HiNF-A TRANSFAC yes 21258499
chr17 54987235 54987241 HiNF-A TRANSFAC yes 54918653
chr17 54987235 54987249 SPIC JASPAR yes 21258500
chr17 54987235 54987249 SPIC JASPAR yes 54918654
chr17 54987241 54987246 ETS2 TRANSFAC yes 21258501
chr17 54987241 54987246 ETS2 TRANSFAC yes 54918655
chr17 54987244 54987249 ETS2 TRANSFAC yes 21258502
chr17 54987244 54987249 ETS2 TRANSFAC yes 54918656
chr17 54987246 54987256 RELA JASPAR yes 21258503
chr17 54987246 54987256 RELA JASPAR yes 54918657
chr17 54987254 54987266 ZBTB7C JASPAR yes 21258504
chr17 54987254 54987266 ZBTB7C JASPAR yes 54918658
chr17 54987256 54987276 RREB1 JASPAR yes 21258505
chr17 54987256 54987276 RREB1 JASPAR yes 54918659
chr17 54987264 54987267 MYB TRANSFAC yes 21258506
chr17 54987264 54987267 MYB TRANSFAC yes 54918660
chr17 54987278 54987294 POU4F2 JASPAR yes 21258507
chr17 54987278 54987294 POU4F3 JASPAR yes 21258508
chr17 54987278 54987294 POU4F2 JASPAR yes 54918661
chr17 54987278 54987294 POU4F3 JASPAR yes 54918662
chr17 54987280 54987284 YY1 TRANSFAC yes 21258509
chr17 54987280 54987284 YY1 TRANSFAC yes 54918663
chr17 54987280 54987294 POU4F1 JASPAR yes 21258510
chr17 54987280 54987294 POU4F1 JASPAR yes 54918664
chr17 54987334 54987337 MYB TRANSFAC yes 21258511
chr17 54987334 54987337 MYB TRANSFAC yes 54918665
chr17 54987334 54987345 PROP1 JASPAR yes 21258512
chr17 54987334 54987345 PROP1 JASPAR yes 54918666
chr17 54987338 54987345 NKX3-1 JASPAR yes 21258513
chr17 54987338 54987345 NKX3-1 JASPAR yes 54918667
chr17 54987370 54987380 REL JASPAR yes 21258514
chr17 54987370 54987380 REL JASPAR yes 54918668
chr17 54987411 54987420 VENTX JASPAR yes 21258515
chr17 54987411 54987420 VENTX JASPAR yes 54918669
chr17 54987412 54987420 BARX1 JASPAR yes 21258516
chr17 54987412 54987420 BARX1 JASPAR yes 54918670
chr17 54987446 54987449 MYB TRANSFAC yes 21258517
chr17 54987446 54987449 MYB TRANSFAC yes 54918671
chr17 54987482 54987492 MAX JASPAR yes 21258518
chr17 54987482 54987492 MAX JASPAR yes 54918672
chr17 54987482 54987494 HES5 JASPAR yes 21258519
chr17 54987482 54987494 HES5 JASPAR yes 54918673
chr17 54987486 54987501 TP53 JASPAR yes 21258520
chr17 54987486 54987501 TP53 JASPAR yes 54918674
chr17 54987497 54987517 TP53 JASPAR yes 21258521
chr17 54987497 54987517 TP53 JASPAR yes 54918675
chr17 54987503 54987518 HSF1 JASPAR yes 21258522
chr17 54987503 54987518 HSF1 JASPAR yes 54918676
chr17 54987508 54987523 HSF1 JASPAR yes 21258523
chr17 54987508 54987523 HSF1 JASPAR yes 54918677
chr17 54987509 54987522 HSF1 JASPAR yes 21258524
chr17 54987509 54987522 HSF2 JASPAR yes 21258525
chr17 54987509 54987522 HSF4 JASPAR yes 21258526
chr17 54987509 54987522 HSF1 JASPAR yes 54918678
chr17 54987509 54987522 HSF2 JASPAR yes 54918679
chr17 54987509 54987522 HSF4 JASPAR yes 54918680
chr17 54987509 54987526 BCL6B JASPAR yes 21258527
chr17 54987509 54987526 BCL6B JASPAR yes 54918681
chr17 54987511 54987516 H4TF1 TRANSFAC yes 21258528
chr17 54987511 54987516 H4TF1 TRANSFAC yes 54918682
chr17 54987511 54987526 STAT1 JASPAR yes 21258529
chr17 54987511 54987526 STAT1 JASPAR yes 54918683
chr17 54987512 54987523 STAT3 JASPAR yes 21258530
chr17 54987512 54987523 STAT3 JASPAR yes 54918684
chr17 54987513 54987524 STAT1 JASPAR yes 21258531
chr17 54987513 54987524 STAT3 JASPAR yes 21258532
chr17 54987513 54987524 STAT1 JASPAR yes 54918685
chr17 54987513 54987524 STAT3 JASPAR yes 54918686
chr17 54987520 54987538 NR3C1 JASPAR yes 21258533
chr17 54987520 54987538 NR3C1 JASPAR yes 54918687
chr17 54987529 54987537 FEV JASPAR yes 21258534
chr17 54987529 54987537 FEV JASPAR yes 54918688
chr17 54987531 54987536 ETS2 TRANSFAC yes 21258535
chr17 54987531 54987536 ETS2 TRANSFAC yes 54918689
chr17 54987532 54987547 STAT1 JASPAR yes 21258536
chr17 54987532 54987547 STAT1 JASPAR yes 54918690
chr17 54987534 54987545 STAT1 JASPAR yes 21258537
chr17 54987534 54987545 STAT1 JASPAR yes 54918691
chr17 54987539 54987549 HMBOX1 JASPAR yes 21258538
chr17 54987539 54987549 HMBOX1 JASPAR yes 54918692
chr17 54987541 54987544 MYB TRANSFAC yes 21258539
chr17 54987541 54987544 MYB TRANSFAC yes 54918693
chr17 54987562 54987583 IRF1 JASPAR yes 21258540
chr17 54987562 54987583 IRF1 JASPAR yes 54918694
chr17 54987563 54987576 SMAD2 JASPAR yes 21258541
chr17 54987563 54987576 SMAD2 JASPAR yes 54918695
chr17 54987564 54987579 PRDM1 JASPAR yes 21258542
chr17 54987564 54987579 PRDM1 JASPAR yes 54918696
chr17 54987570 54987585 STAT2 JASPAR yes 21258543
chr17 54987570 54987585 STAT2 JASPAR yes 54918697
chr17 54987614 54987619 SP1 TRANSFAC yes 21258544
chr17 54987614 54987619 SP1 TRANSFAC yes 54918698
chr17 54987658 54987668 MAX JASPAR yes 21258545
chr17 54987658 54987668 MAX JASPAR yes 54918699
chr17 54987658 54987669 USF2 JASPAR yes 21258546
chr17 54987658 54987669 USF2 JASPAR yes 54918700
chr17 54987675 54987685 SP1 JASPAR yes 21258547
chr17 54987675 54987685 SP1 JASPAR yes 54918701
chr17 54987681 54987696 HNF4A JASPAR yes 21258548
chr17 54987681 54987696 HNF4A JASPAR yes 54918702
chr17 54987684 54987704 ESR1 JASPAR yes 21258549
chr17 54987684 54987704 ESR1 JASPAR yes 54918703
chr17 54987686 54987697 ESRRB JASPAR yes 21258550
chr17 54987686 54987697 ESRRB JASPAR yes 54918704
chr17 54987687 54987707 PPARG JASPAR yes 21258551
chr17 54987687 54987707 PPARG JASPAR yes 54918705
chr17 54987698 54987701 MYB TRANSFAC yes 21258552
chr17 54987698 54987701 MYB TRANSFAC yes 54918706
chr17 54987735 54987749 RXRB JASPAR yes 21258553
chr17 54987735 54987749 RXRG JASPAR yes 21258554
chr17 54987735 54987749 RXRB JASPAR yes 54918707
chr17 54987735 54987749 RXRG JASPAR yes 54918708
chr17 54987738 54987751 NR2F1 JASPAR yes 21258555
chr17 54987738 54987751 NR2F1 JASPAR yes 54918709
chr17 54987742 54987754 PKNOX1 JASPAR yes 21258556
chr17 54987742 54987754 TGIF1 JASPAR yes 21258557
chr17 54987742 54987754 PKNOX1 JASPAR yes 54918710
chr17 54987742 54987754 TGIF1 JASPAR yes 54918711
chr17 54987743 54987763 ESR1 JASPAR yes 21258558
chr17 54987743 54987763 ESR1 JASPAR yes 54918712
chr17 54987750 54987761 NFE2L2 JASPAR yes 21258559
chr17 54987750 54987761 NFE2L2 JASPAR yes 54918713
chr17 54987757 54987771 RXRB JASPAR yes 21258560
chr17 54987757 54987771 RXRG JASPAR yes 21258561
chr17 54987757 54987771 RXRB JASPAR yes 54918714
chr17 54987757 54987771 RXRG JASPAR yes 54918715
chr17 54987757 54987772 NR2C2 JASPAR yes 21258562
chr17 54987757 54987772 NR2C2 JASPAR yes 54918716
chr17 54987776 54987779 MYB TRANSFAC yes 21258563
chr17 54987776 54987779 MYB TRANSFAC yes 54918717
chr17 54987788 54987796 GATA3 JASPAR yes 21258564
chr17 54987788 54987796 GATA5 JASPAR yes 21258565
chr17 54987788 54987796 GATA3 JASPAR yes 54918718
chr17 54987788 54987796 GATA5 JASPAR yes 54918719
chr17 54987793 54987801 TBX5 JASPAR yes 21258566
chr17 54987793 54987801 TBX5 JASPAR yes 54918720
chr17 54987797 54987812 HNF4G JASPAR yes 21258567
chr17 54987797 54987812 HNF4G JASPAR yes 54918721
chr17 54987798 54987813 HNF4A JASPAR yes 21258568
chr17 54987798 54987813 HNF4A JASPAR yes 54918722
chr17 54987820 54987830 ELK1 JASPAR yes 21258569
chr17 54987820 54987830 ELK3 JASPAR yes 21258570
chr17 54987820 54987830 ERF JASPAR yes 21258571
chr17 54987820 54987830 ETS1 JASPAR yes 21258572
chr17 54987820 54987830 ETV1 JASPAR yes 21258573
chr17 54987820 54987830 ETV3 JASPAR yes 21258574
chr17 54987820 54987830 ETV4 JASPAR yes 21258575
chr17 54987820 54987830 ETV5 JASPAR yes 21258576
chr17 54987820 54987830 FEV JASPAR yes 21258577
chr17 54987820 54987830 ELK1 JASPAR yes 54918723
chr17 54987820 54987830 ELK3 JASPAR yes 54918724
chr17 54987820 54987830 ERF JASPAR yes 54918725
chr17 54987820 54987830 ETS1 JASPAR yes 54918726
chr17 54987820 54987830 ETV1 JASPAR yes 54918727
chr17 54987820 54987830 ETV3 JASPAR yes 54918728
chr17 54987820 54987830 ETV4 JASPAR yes 54918729
chr17 54987820 54987830 ETV5 JASPAR yes 54918730
chr17 54987820 54987830 FEV JASPAR yes 54918731
chr17 54987820 54987831 SPDEF JASPAR yes 21258578
chr17 54987820 54987831 SPDEF JASPAR yes 54918732
chr17 54987821 54987830 ELK4 JASPAR yes 21258579
chr17 54987821 54987830 ELK4 JASPAR yes 54918733
chr17 54987864 54987876 TFAP2A JASPAR yes 21258580
chr17 54987864 54987876 TFAP2B JASPAR yes 21258581
chr17 54987864 54987876 TFAP2A JASPAR yes 54918734
chr17 54987864 54987876 TFAP2B JASPAR yes 54918735
chr17 54987875 54987881 NFIC JASPAR yes 21258582
chr17 54987875 54987881 NFIC JASPAR yes 54918736
SNP sites on vista25212[chr17:54987224-54987877]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54987280 rs78209908 G A
POU4F1 POU4F2 POU4F3 YY1
4945738
chr17 54987325 rs369341589 T C no 4945739
chr17 54987338 rs141291292 C G
NKX3-1 PROP1
4945740
chr17 54987355 rs145078373 A G no 4945741
chr17 54987383 rs372778469 C T no 4945742
chr17 54987414 rs567903994 C A
BARX1 VENTX
4945743
chr17 54987529 rs146018986 A AAC,AC
FEV NR3C1
4945744
chr17 54987541 rs74731673 G T
HMBOX1 MYB STAT1
4945745
chr17 54987831 rs78287074 C T
NR2F2 RXRA SPDEF
4945746
Genes possibly regulated by vista25212[chr17:54987224-54987877]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54869274 54916134 - C17orf67 ENSG00000214226.4 54916134 0.84 0.98 16066 28910
chr17 54911460 54946036 + DGKE ENSG00000153933.5 54911460 0.76 0.98 16067 24236
chr17 54965270 54991399 - TRIM25 ENSG00000121060.10 54991399 0.71 1.0 16068 96478
chr17 55015548 55038415 - COIL ENSG00000121058.4 55038415 0.61 0.99 16069 49462
chr17 55055466 55084129 + SCPEP1 ENSG00000121064.8 55055466 0.77 0.99 16070 32411
Expression level of Genes
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miRNAs possibly regulated by vista25212[chr17:54987224-54987877]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 54968642 54968664 - hsa-miR-3614-3p MIMAT0017993 54991408 0.0001295840352468576 0.932496 0.676023 722
Expression level of miRNAs
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