EnhancerDB
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  3. vista25215[chr17:54995280-54995673]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25215[chr17:54995280-54995673]
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Tissue distribution of vista25215
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Transcription factor that possibly regulate vista25215[chr17:54995280-54995673]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54995323 54995327 YY1 TRANSFAC yes 21258692
chr17 54995340 54995356 SOX4 JASPAR yes 21258693
chr17 54995345 54995351 NFIC JASPAR yes 21258694
chr17 54995349 54995353 YY1 TRANSFAC yes 21258695
chr17 54995352 54995356 YY1 TRANSFAC yes 21258696
chr17 54995387 54995400 SCRT2 JASPAR yes 21258697
chr17 54995407 54995413 SOX10 JASPAR yes 21258698
chr17 54995423 54995438 STAT1 JASPAR yes 21258699
chr17 54995425 54995436 STAT1 JASPAR yes 21258700
chr17 54995425 54995436 STAT3 JASPAR yes 21258701
chr17 54995429 54995437 FEV JASPAR yes 21258702
chr17 54995430 54995441 NFKB1 JASPAR yes 21258703
chr17 54995431 54995441 NFKB1 JASPAR yes 21258704
chr17 54995431 54995442 NFKB1 JASPAR yes 21258705
chr17 54995435 54995443 FEV JASPAR yes 21258706
chr17 54995437 54995442 ETS2 TRANSFAC yes 21258707
chr17 54995440 54995461 IRF1 JASPAR yes 21258708
chr17 54995442 54995445 MYB TRANSFAC yes 21258709
chr17 54995442 54995457 PRDM1 JASPAR yes 21258710
chr17 54995442 54995457 STAT2 JASPAR yes 21258711
chr17 54995463 54995467 NFE TRANSFAC yes 21258712
chr17 54995464 54995469 GATA2 JASPAR yes 21258713
chr17 54995471 54995475 LFA1 TRANSFAC yes 21258714
chr17 54995471 54995482 USF2 JASPAR yes 21258715
chr17 54995472 54995482 TFEB JASPAR yes 21258716
chr17 54995472 54995482 TFEC JASPAR yes 21258717
chr17 54995473 54995488 JUND JASPAR yes 21258718
chr17 54995474 54995487 JUN JASPAR yes 21258719
chr17 54995475 54995489 ATF7 JASPAR yes 21258720
chr17 54995475 54995489 BATF3 JASPAR yes 21258721
chr17 54995476 54995488 JDP2 JASPAR yes 21258722
chr17 54995477 54995490 JUN JASPAR yes 21258723
chr17 54995478 54995483 ATF1 TRANSFAC yes 21258724
chr17 54995478 54995486 CREB1 JASPAR yes 21258725
chr17 54995480 54995485 ATF1 TRANSFAC yes 21258726
chr17 54995494 54995508 JUN JASPAR yes 21258727
chr17 54995496 54995507 BATF JASPAR yes 21258728
chr17 54995497 54995508 JUNB JASPAR yes 21258729
chr17 54995497 54995508 NFE2L2 JASPAR yes 21258730
chr17 54995498 54995509 FOS JASPAR yes 21258731
chr17 54995498 54995509 FOSL1 JASPAR yes 21258732
chr17 54995498 54995509 JUND JASPAR yes 21258733
chr17 54995499 54995510 FOSL2 JASPAR yes 21258734
chr17 54995499 54995510 JUNB JASPAR yes 21258735
chr17 54995499 54995513 JUN JASPAR yes 21258736
chr17 54995508 54995519 USF1 JASPAR yes 21258737
chr17 54995509 54995519 TFEB JASPAR yes 21258738
chr17 54995509 54995519 TFEC JASPAR yes 21258739
chr17 54995509 54995520 USF1 JASPAR yes 21258740
chr17 54995520 54995535 FOXP1 JASPAR yes 21258741
chr17 54995521 54995527 TBP TRANSFAC yes 21258742
chr17 54995521 54995542 IRF1 JASPAR yes 21258743
chr17 54995522 54995534 FOXC2 JASPAR yes 21258744
chr17 54995522 54995542 RREB1 JASPAR yes 21258745
chr17 54995523 54995534 FOXP2 JASPAR yes 21258746
chr17 54995527 54995547 RREB1 JASPAR yes 21258747
chr17 54995528 54995543 FOXP1 JASPAR yes 21258748
chr17 54995528 54995549 IRF1 JASPAR yes 21258749
chr17 54995529 54995550 IRF1 JASPAR yes 21258750
chr17 54995530 54995550 RREB1 JASPAR yes 21258751
chr17 54995531 54995542 FOXP2 JASPAR yes 21258752
chr17 54995533 54995548 FOXP1 JASPAR yes 21258753
chr17 54995535 54995550 FOXP1 JASPAR yes 21258754
chr17 54995535 54995556 IRF1 JASPAR yes 21258755
chr17 54995536 54995551 FOXP1 JASPAR yes 21258756
chr17 54995536 54995557 IRF1 JASPAR yes 21258757
chr17 54995537 54995552 FOXP1 JASPAR yes 21258758
chr17 54995540 54995555 STAT2 JASPAR yes 21258759
chr17 54995551 54995555 NFE TRANSFAC yes 21258760
chr17 54995551 54995556 GATA1 TRANSFAC yes 21258761
chr17 54995551 54995557 GATA3 JASPAR yes 21258762
chr17 54995555 54995562 E2F1 TRANSFAC yes 21258763
chr17 54995558 54995573 HSF1 JASPAR yes 21258764
chr17 54995562 54995573 NFKB1 JASPAR yes 21258765
chr17 54995586 54995600 POU4F1 JASPAR yes 21258766
chr17 54995586 54995602 POU4F3 JASPAR yes 21258767
chr17 54995587 54995603 POU4F2 JASPAR yes 21258768
chr17 54995587 54995603 POU4F3 JASPAR yes 21258769
chr17 54995589 54995603 POU4F1 JASPAR yes 21258770
chr17 54995595 54995606 PHOX2A JASPAR yes 21258771
chr17 54995595 54995606 PROP1 JASPAR yes 21258772
chr17 54995609 54995612 MYB TRANSFAC yes 21258773
chr17 54995614 54995625 STAT1 JASPAR yes 21258774
chr17 54995616 54995637 MAFG JASPAR yes 21258775
chr17 54995621 54995639 MAFF JASPAR yes 21258776
chr17 54995622 54995637 MAFK JASPAR yes 21258777
chr17 54995631 54995635 YY1 TRANSFAC yes 21258778
chr17 54995633 54995654 IRF1 JASPAR yes 21258779
chr17 54995634 54995640 TCF4 TRANSFAC yes 21258780
chr17 54995645 54995660 FOXA1 JASPAR yes 21258781
chr17 54995646 54995652 TCF4 TRANSFAC yes 21258782
chr17 54995646 54995658 FOXI1 JASPAR yes 21258783
chr17 54995646 54995661 FOXP1 JASPAR yes 21258784
chr17 54995647 54995658 FOXP2 JASPAR yes 21258785
chr17 54995647 54995659 FOXC2 JASPAR yes 21258786
chr17 54995647 54995661 FOXF2 JASPAR yes 21258787
chr17 54995648 54995656 FOXG1 JASPAR yes 21258788
chr17 54995648 54995656 FOXO3 JASPAR yes 21258789
chr17 54995648 54995659 FOXB1 JASPAR yes 21258790
chr17 54995648 54995659 FOXC1 JASPAR yes 21258791
chr17 54995649 54995660 FOXA1 JASPAR yes 21258792
chr17 54995649 54995664 MEF2A JASPAR yes 21258793
chr17 54995650 54995665 MEF2C JASPAR yes 21258794
chr17 54995650 54995671 IRF1 JASPAR yes 21258795
chr17 54995651 54995663 MEF2A JASPAR yes 21258796
chr17 54995653 54995657 YY1 TRANSFAC yes 21258797
chr17 54995658 54995665 NKX3-1 JASPAR yes 21258798
chr17 54995663 54995667 YY1 TRANSFAC yes 21258799
SNP sites on vista25215[chr17:54995280-54995673]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54995305 rs536051435 T A no 4945799
chr17 54995337 rs114309166 T C no 4945800
chr17 54995470 rs143223606 C T no 4945801
chr17 54995471 rs578060146 G A
LFA1 USF2
4945802
chr17 54995483 rs191606046 G A
ATF1 ATF7 BATF3 CREB1 JDP2 JUN JUND
4945803
chr17 54995530 rs143929475 A C,G
FOXC2 FOXP1 FOXP2 IRF1 RREB1
4945804
chr17 54995535 rs575798263 A G
FOXP1 FOXP2 IRF1 RREB1
4945805
chr17 54995542 rs148643832 A C
FOXP1 FOXP2 IRF1 RREB1 STAT2
4945806
chr17 54995550 rs141219266 A C
FOXP1 IRF1 RREB1 STAT2
4945807
chr17 54995577 rs145587570 TAAG T no 4945808
Genes possibly regulated by vista25215[chr17:54995280-54995673]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54869274 54916134 - C17orf67 ENSG00000214226.4 54916134 0.84 0.98 16066 20854
chr17 54911460 54946036 + DGKE ENSG00000153933.5 54911460 0.76 0.98 16067 16180
chr17 54965270 54991399 - TRIM25 ENSG00000121060.10 54991399 0.71 1.0 16068 96119
chr17 55015548 55038415 - COIL ENSG00000121058.4 55038415 0.61 0.99 16069 57258
chr17 55055466 55084129 + SCPEP1 ENSG00000121064.8 55055466 0.77 0.99 16070 40207
Expression level of Genes
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miRNAs possibly regulated by vista25215[chr17:54995280-54995673]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results