EnhancerDB
  1. Home
  2. Enhancers
  3. vista25216[chr17:54996234-54996798]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25216[chr17:54996234-54996798]
Back to top
Tissue distribution of vista25216
Back to top
Transcription factor that possibly regulate vista25216[chr17:54996234-54996798]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 54996297 54996731 STAT3 UCSC Txn Factor no Conserved 108273572
chr17 54996369 54996704 FOS UCSC Txn Factor no Conserved 108273575
chr17 54996415 54996744 CEBPB UCSC Txn Factor no Conserved 108273576
chr17 54996237 54996248 HOXD12 JASPAR yes 21258800
chr17 54996268 54996272 YY1 TRANSFAC yes 21258801
chr17 54996270 54996276 TCF4 TRANSFAC yes 21258802
chr17 54996270 54996285 FOXP1 JASPAR yes 21258803
chr17 54996271 54996282 FOXP2 JASPAR yes 21258804
chr17 54996271 54996283 FOXC2 JASPAR yes 21258805
chr17 54996271 54996285 FOXF2 JASPAR yes 21258806
chr17 54996272 54996280 FOXG1 JASPAR yes 21258807
chr17 54996272 54996280 FOXO3 JASPAR yes 21258808
chr17 54996277 54996282 GATA2 JASPAR yes 21258809
chr17 54996278 54996284 ZNF354C JASPAR yes 21258810
chr17 54996296 54996310 NR2F1 JASPAR yes 21258811
chr17 54996304 54996319 FOXA1 JASPAR yes 21258812
chr17 54996308 54996319 FOXA1 JASPAR yes 21258813
chr17 54996328 54996332 TEAD2 TRANSFAC yes 21258814
chr17 54996328 54996333 TBP TRANSFAC yes 21258815
chr17 54996349 54996353 YY1 TRANSFAC yes 21258816
chr17 54996359 54996374 TP53 JASPAR yes 21258817
chr17 54996367 54996377 CLOCK JASPAR yes 21258818
chr17 54996367 54996377 MYF6 JASPAR yes 21258819
chr17 54996367 54996377 NEUROG2 JASPAR yes 21258820
chr17 54996367 54996379 TAL1 JASPAR yes 21258821
chr17 54996368 54996378 MAX JASPAR yes 21258822
chr17 54996380 54996396 RFX2 JASPAR yes 21258823
chr17 54996380 54996396 RFX3 JASPAR yes 21258824
chr17 54996380 54996396 RFX5 JASPAR yes 21258825
chr17 54996381 54996395 EBF1 JASPAR yes 21258826
chr17 54996382 54996393 EBF1 JASPAR yes 21258827
chr17 54996383 54996394 EBF1 JASPAR yes 21258828
chr17 54996388 54996393 TFAP2A TRANSFAC yes 21258829
chr17 54996388 54996394 MZF1 JASPAR yes 21258830
chr17 54996401 54996410 NKX3-2 JASPAR yes 21258831
chr17 54996406 54996424 MAFF JASPAR yes 21258832
chr17 54996412 54996423 NFE2L2 JASPAR yes 21258833
chr17 54996417 54996428 USF1 JASPAR yes 21258834
chr17 54996418 54996428 TFE3 JASPAR yes 21258835
chr17 54996418 54996428 TFEB JASPAR yes 21258836
chr17 54996418 54996428 TFEC JASPAR yes 21258837
chr17 54996418 54996429 USF2 JASPAR yes 21258838
chr17 54996425 54996435 EN2 JASPAR yes 21258839
chr17 54996439 54996442 MYB TRANSFAC yes 21258840
chr17 54996442 54996446 YY1 TRANSFAC yes 21258841
chr17 54996442 54996457 STAT1 JASPAR yes 21258842
chr17 54996444 54996455 STAT1 JASPAR yes 21258843
chr17 54996444 54996455 STAT3 JASPAR yes 21258844
chr17 54996455 54996461 NFIC JASPAR yes 21258845
chr17 54996456 54996466 MYF6 JASPAR yes 21258846
chr17 54996483 54996487 YY1 TRANSFAC yes 21258847
chr17 54996488 54996492 TEAD2 TRANSFAC yes 21258848
chr17 54996519 54996530 CEBPA JASPAR yes 21258849
chr17 54996520 54996531 CEBPB JASPAR yes 21258850
chr17 54996527 54996537 MYF6 JASPAR yes 21258851
chr17 54996527 54996537 NEUROG2 JASPAR yes 21258852
chr17 54996529 54996533 YY1 TRANSFAC yes 21258853
chr17 54996569 54996579 TBX21 JASPAR yes 21258854
chr17 54996569 54996580 TBX20 JASPAR yes 21258855
chr17 54996569 54996580 TBX2 JASPAR yes 21258856
chr17 54996569 54996582 EOMES JASPAR yes 21258857
chr17 54996570 54996578 MGA JASPAR yes 21258858
chr17 54996570 54996578 TBX15 JASPAR yes 21258859
chr17 54996570 54996578 TBX1 JASPAR yes 21258860
chr17 54996570 54996578 TBX4 JASPAR yes 21258861
chr17 54996570 54996578 TBX5 JASPAR yes 21258862
chr17 54996570 54996580 TBR1 JASPAR yes 21258863
chr17 54996579 54996590 NFIL3 JASPAR yes 21258864
chr17 54996579 54996593 ATF7 JASPAR yes 21258865
chr17 54996580 54996592 DBP JASPAR yes 21258866
chr17 54996580 54996592 HLF JASPAR yes 21258867
chr17 54996580 54996592 JDP2 JASPAR yes 21258868
chr17 54996580 54996592 TEF JASPAR yes 21258869
chr17 54996580 54996593 ATF4 JASPAR yes 21258870
chr17 54996580 54996595 JUND JASPAR yes 21258871
chr17 54996581 54996594 JUN JASPAR yes 21258872
chr17 54996584 54996594 POU6F2 JASPAR yes 21258873
chr17 54996588 54996592 YY1 TRANSFAC yes 21258874
chr17 54996589 54996602 POU3F3 JASPAR yes 21258875
chr17 54996589 54996603 POU1F1 JASPAR yes 21258876
chr17 54996590 54996602 POU3F1 JASPAR yes 21258877
chr17 54996590 54996602 POU3F2 JASPAR yes 21258878
chr17 54996598 54996612 POU1F1 JASPAR yes 21258879
chr17 54996599 54996611 POU3F1 JASPAR yes 21258880
chr17 54996599 54996611 POU3F2 JASPAR yes 21258881
chr17 54996599 54996612 POU3F3 JASPAR yes 21258882
chr17 54996601 54996610 POU3F4 JASPAR yes 21258883
chr17 54996601 54996610 POU5F1B JASPAR yes 21258884
chr17 54996606 54996610 YY1 TRANSFAC yes 21258885
chr17 54996612 54996616 H1TF2 TRANSFAC yes 21258886
chr17 54996612 54996616 NFE TRANSFAC yes 21258887
chr17 54996612 54996616 SRF TRANSFAC yes 21258888
chr17 54996616 54996630 JUN JASPAR yes 21258889
chr17 54996618 54996629 BATF JASPAR yes 21258890
chr17 54996619 54996630 FOSL2 JASPAR yes 21258891
chr17 54996619 54996630 JUNB JASPAR yes 21258892
chr17 54996620 54996631 FOSL1 JASPAR yes 21258893
chr17 54996620 54996631 JUND JASPAR yes 21258894
chr17 54996621 54996630 JDP2 JASPAR yes 21258895
chr17 54996632 54996640 FOXO3 JASPAR yes 21258896
chr17 54996639 54996654 LEF1 JASPAR yes 21258897
chr17 54996640 54996654 TCF7L2 JASPAR yes 21258898
chr17 54996656 54996665 HIC2 JASPAR yes 21258899
chr17 54996659 54996663 LFA1 TRANSFAC yes 21258900
chr17 54996660 54996673 POU2F2 JASPAR yes 21258901
chr17 54996662 54996666 YY1 TRANSFAC yes 21258902
chr17 54996677 54996687 NFATC3 JASPAR yes 21258903
chr17 54996679 54996686 NFATC2 JASPAR yes 21258904
chr17 54996703 54996724 IRF1 JASPAR yes 21258905
chr17 54996707 54996719 IRF1 JASPAR yes 21258906
chr17 54996708 54996729 IRF1 JASPAR yes 21258907
chr17 54996709 54996715 TCF4 TRANSFAC yes 21258908
chr17 54996709 54996724 FOXP1 JASPAR yes 21258909
chr17 54996709 54996730 IRF1 JASPAR yes 21258910
chr17 54996710 54996721 FOXP2 JASPAR yes 21258911
chr17 54996710 54996722 FOXC2 JASPAR yes 21258912
chr17 54996710 54996725 STAT2 JASPAR yes 21258913
chr17 54996710 54996731 IRF1 JASPAR yes 21258914
chr17 54996711 54996726 FOXP1 JASPAR yes 21258915
chr17 54996711 54996732 IRF1 JASPAR yes 21258916
chr17 54996712 54996733 IRF1 JASPAR yes 21258917
chr17 54996713 54996728 FOXP1 JASPAR yes 21258918
chr17 54996713 54996734 IRF1 JASPAR yes 21258919
chr17 54996714 54996729 FOXP1 JASPAR yes 21258920
chr17 54996714 54996735 IRF1 JASPAR yes 21258921
chr17 54996715 54996730 FOXP1 JASPAR yes 21258922
chr17 54996715 54996736 IRF1 JASPAR yes 21258923
chr17 54996716 54996731 FOXP1 JASPAR yes 21258924
chr17 54996717 54996732 FOXP1 JASPAR yes 21258925
chr17 54996718 54996733 FOXP1 JASPAR yes 21258926
chr17 54996719 54996734 FOXP1 JASPAR yes 21258927
chr17 54996720 54996735 FOXP1 JASPAR yes 21258928
chr17 54996721 54996736 FOXP1 JASPAR yes 21258929
chr17 54996722 54996737 FOXP1 JASPAR yes 21258930
chr17 54996723 54996738 FOXP1 JASPAR yes 21258931
chr17 54996743 54996762 PAX5 JASPAR yes 21258932
chr17 54996773 54996783 SREBF1 JASPAR yes 21258933
chr17 54996773 54996783 SREBF2 JASPAR yes 21258934
chr17 54996773 54996786 EOMES JASPAR yes 21258935
chr17 54996774 54996782 MGA JASPAR yes 21258936
SNP sites on vista25216[chr17:54996234-54996798]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 54996469 rs9915923 C T
CEBPB FOS STAT3
4945809
chr17 54996515 rs144148983 G A
CEBPB FOS STAT3
4945810
chr17 54996542 rs58126092 T C
CEBPB FOS STAT3
4945811
chr17 54996654 rs78661273 T C
CEBPB FOS LEF1 STAT3 TCF7L2
4945812
chr17 54996712 rs59657011 T C
CEBPB FOXC2 FOXP1 FOXP2 IRF1 STAT2 STAT3 TCF4
4945813
chr17 54996716 rs57818314 T G
CEBPB FOXC2 FOXP1 FOXP2 IRF1 STAT2 STAT3
4945814
chr17 54996721 rs536379394 T G
CEBPB FOXC2 FOXP1 FOXP2 IRF1 STAT2 STAT3
4945815
Genes possibly regulated by vista25216[chr17:54996234-54996798]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 54869274 54916134 - C17orf67 ENSG00000214226.4 54916134 0.84 0.98 16066 19900
chr17 54911460 54946036 + DGKE ENSG00000153933.5 54911460 0.76 0.98 16067 15226
chr17 54965270 54991399 - TRIM25 ENSG00000121060.10 54991399 0.71 1.0 16068 95165
chr17 55015548 55038415 - COIL ENSG00000121058.4 55038415 0.61 0.99 16069 58383
chr17 55055466 55084129 + SCPEP1 ENSG00000121064.8 55055466 0.77 0.99 16070 41332
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25216[chr17:54996234-54996798]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results