EnhancerDB
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  3. vista25219[chr17:55101345-55101678]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25219[chr17:55101345-55101678]
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Tissue distribution of vista25219
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Transcription factor that possibly regulate vista25219[chr17:55101345-55101678]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55101345 55101360 FOXP1 JASPAR yes 21259002
chr17 55101345 55101360 FOXP1 JASPAR yes 54922959
chr17 55101346 55101367 IRF1 JASPAR yes 21259003
chr17 55101346 55101367 IRF1 JASPAR yes 54922960
chr17 55101347 55101362 FOXP1 JASPAR yes 21259004
chr17 55101347 55101368 IRF1 JASPAR yes 21259005
chr17 55101351 55101372 IRF1 JASPAR yes 21259006
chr17 55101352 55101367 FOXP1 JASPAR yes 21259007
chr17 55101352 55101373 IRF1 JASPAR yes 21259008
chr17 55101353 55101374 IRF1 JASPAR yes 21259009
chr17 55101357 55101372 FOXP1 JASPAR yes 21259010
chr17 55101360 55101375 STAT2 JASPAR yes 21259011
chr17 55101375 55101379 LFA1 TRANSFAC yes 21259012
chr17 55101386 55101399 TFAP2A JASPAR yes 21259013
chr17 55101386 55101399 TFAP2B JASPAR yes 21259014
chr17 55101386 55101399 TFAP2C JASPAR yes 21259015
chr17 55101387 55101398 EBF1 JASPAR yes 21259016
chr17 55101401 55101415 SPI1 JASPAR yes 21259017
chr17 55101410 55101420 HOXA13 JASPAR yes 21259018
chr17 55101410 55101420 HOXB13 JASPAR yes 21259019
chr17 55101410 55101420 HOXD13 JASPAR yes 21259020
chr17 55101413 55101422 VENTX JASPAR yes 21259021
chr17 55101421 55101425 YY1 TRANSFAC yes 21259022
chr17 55101432 55101445 POU3F3 JASPAR yes 21259023
chr17 55101432 55101446 POU1F1 JASPAR yes 21259024
chr17 55101433 55101445 POU3F1 JASPAR yes 21259025
chr17 55101434 55101443 POU3F4 JASPAR yes 21259026
chr17 55101439 55101442 MYB TRANSFAC yes 21259027
chr17 55101449 55101455 ZNF354C JASPAR yes 21259028
chr17 55101450 55101458 RHOXF1 JASPAR yes 21259029
chr17 55101464 55101469 H4TF1 TRANSFAC yes 21259030
chr17 55101464 55101479 STAT1 JASPAR yes 21259031
chr17 55101466 55101477 STAT1 JASPAR yes 21259032
chr17 55101466 55101477 STAT3 JASPAR yes 21259033
chr17 55101467 55101475 STAT6 TRANSFAC yes 21259034
chr17 55101476 55101484 TBX5 JASPAR yes 21259035
chr17 55101479 55101488 THAP1 JASPAR yes 21259036
chr17 55101482 55101486 LFA1 TRANSFAC yes 21259037
chr17 55101516 55101534 SRF JASPAR yes 21259038
chr17 55101518 55101534 SRF JASPAR yes 21259039
chr17 55101528 55101532 LFA1 TRANSFAC yes 21259040
chr17 55101553 55101557 YY1 TRANSFAC yes 21259041
chr17 55101563 55101567 NFE TRANSFAC yes 21259042
chr17 55101594 55101611 RARA JASPAR yes 21259043
chr17 55101595 55101614 CTCF JASPAR yes 21259044
chr17 55101611 55101615 NFE TRANSFAC yes 21259045
chr17 55101613 55101625 CREB1 JASPAR yes 21259046
chr17 55101616 55101628 YY1 JASPAR yes 21259047
chr17 55101632 55101652 TP63 JASPAR yes 21259048
SNP sites on vista25219[chr17:55101345-55101678]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55101428 rs11079269 T C no 4946264
chr17 55101609 rs2332851 A T
CTCF RARA
4946265
Genes possibly regulated by vista25219[chr17:55101345-55101678]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55015548 55038415 - COIL ENSG00000121058.4 55038415 0.61 0.99 16069 37070
chr17 55055466 55084129 + SCPEP1 ENSG00000121064.8 55055466 0.77 0.99 16070 54121
chr17 55162453 55198710 + AKAP1 ENSG00000121057.8 55162453 0.68 1.0 16071 39225
Expression level of Genes
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miRNAs possibly regulated by vista25219[chr17:55101345-55101678]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results