EnhancerDB
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  3. vista25220[chr17:55113651-55113711]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25220[chr17:55113651-55113711]
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Tissue distribution of vista25220
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Transcription factor that possibly regulate vista25220[chr17:55113651-55113711]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55113655 55113670 HNF4A JASPAR yes 21259049
chr17 55113655 55113670 HNF4A JASPAR yes 54923894
chr17 55113656 55113670 RXRB JASPAR yes 21259050
chr17 55113656 55113670 RXRG JASPAR yes 21259051
chr17 55113656 55113670 RXRB JASPAR yes 54923895
chr17 55113656 55113670 RXRG JASPAR yes 54923896
chr17 55113656 55113671 HNF4G JASPAR yes 21259052
chr17 55113656 55113671 NR2C2 JASPAR yes 21259053
chr17 55113656 55113671 HNF4G JASPAR yes 54923897
chr17 55113656 55113671 NR2C2 JASPAR yes 54923898
chr17 55113668 55113681 NR2F1 JASPAR yes 21259054
chr17 55113668 55113681 NR2F1 JASPAR yes 54923899
chr17 55113670 55113681 ESRRA JASPAR yes 21259055
chr17 55113670 55113681 ESRRA JASPAR yes 54923900
chr17 55113671 55113679 NR4A2 JASPAR yes 21259056
chr17 55113671 55113679 NR4A2 JASPAR yes 54923901
chr17 55113671 55113686 HNF4A JASPAR yes 21259057
chr17 55113671 55113686 HNF4A JASPAR yes 54923902
chr17 55113672 55113686 NR2F1 JASPAR yes 21259058
chr17 55113672 55113686 NR2F1 JASPAR yes 54923903
chr17 55113672 55113687 HNF4G JASPAR yes 21259059
chr17 55113672 55113687 HNF4G JASPAR yes 54923904
chr17 55113683 55113704 ZNF263 JASPAR yes 21259060
chr17 55113683 55113704 ZNF263 JASPAR yes 54923905
chr17 55113692 55113707 PRDM1 JASPAR yes 21259061
chr17 55113692 55113707 PRDM1 JASPAR yes 54923906
chr17 55113693 55113704 E2F6 JASPAR yes 21259062
chr17 55113693 55113704 E2F6 JASPAR yes 54923907
chr17 55113697 55113708 NFKB1 JASPAR yes 21259063
chr17 55113697 55113708 NFKB1 JASPAR yes 54923908
SNP sites on vista25220[chr17:55113651-55113711]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55113681 rs150775766 G C
ESRRA HNF4A HNF4G NR2F1
4946383
Genes possibly regulated by vista25220[chr17:55113651-55113711]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55015548 55038415 - COIL ENSG00000121058.4 55038415 0.61 0.99 16069 24764
chr17 55055466 55084129 + SCPEP1 ENSG00000121064.8 55055466 0.77 0.99 16070 41815
chr17 55162453 55198710 + AKAP1 ENSG00000121057.8 55162453 0.68 1.0 16071 51258
Expression level of Genes
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miRNAs possibly regulated by vista25220[chr17:55113651-55113711]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results