EnhancerDB
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  3. vista25221[chr17:55210991-55211279]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25221[chr17:55210991-55211279]
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Tissue distribution of vista25221
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Transcription factor that possibly regulate vista25221[chr17:55210991-55211279]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55210979 55210996 RXRA JASPAR yes 21259064
chr17 55210979 55210996 RXRA JASPAR yes 54929678
chr17 55210984 55210999 PRDM1 JASPAR yes 21259065
chr17 55210984 55210999 PRDM1 JASPAR yes 54929679
chr17 55210998 55211008 NFATC3 JASPAR yes 21259066
chr17 55210998 55211008 NFATC3 JASPAR yes 54929680
chr17 55210999 55211006 NFATC2 JASPAR yes 21259067
chr17 55210999 55211006 NFATC2 JASPAR yes 54929681
chr17 55211011 55211023 FOXI1 JASPAR yes 21259068
chr17 55211011 55211023 FOXI1 JASPAR yes 54929682
chr17 55211012 55211024 MEF2A JASPAR yes 21259069
chr17 55211012 55211024 MEF2B JASPAR yes 21259070
chr17 55211012 55211024 MEF2D JASPAR yes 21259071
chr17 55211012 55211024 MEF2A JASPAR yes 54929683
chr17 55211012 55211024 MEF2B JASPAR yes 54929684
chr17 55211012 55211024 MEF2D JASPAR yes 54929685
chr17 55211013 55211023 MEF2A JASPAR yes 21259072
chr17 55211013 55211023 MEF2A JASPAR yes 54929686
chr17 55211014 55211018 YY1 TRANSFAC yes 21259073
chr17 55211014 55211018 YY1 TRANSFAC yes 54929687
chr17 55211023 55211038 TFAP2A JASPAR yes 21259074
chr17 55211023 55211038 TFAP2C JASPAR yes 21259075
chr17 55211023 55211038 TFAP2A JASPAR yes 54929688
chr17 55211023 55211038 TFAP2C JASPAR yes 54929689
chr17 55211025 55211040 TFAP2A JASPAR yes 21259076
chr17 55211025 55211040 TFAP2A JASPAR yes 54929690
chr17 55211029 55211039 SREBF1 JASPAR yes 21259077
chr17 55211029 55211039 SREBF1 JASPAR yes 54929691
chr17 55211046 55211061 AR JASPAR yes 21259078
chr17 55211046 55211061 AR JASPAR yes 54929692
chr17 55211046 55211063 NR3C1 JASPAR yes 21259079
chr17 55211046 55211063 NR3C2 JASPAR yes 21259080
chr17 55211046 55211063 NR3C1 JASPAR yes 54929693
chr17 55211046 55211063 NR3C2 JASPAR yes 54929694
chr17 55211052 55211062 SREBF1 JASPAR yes 21259081
chr17 55211052 55211062 SREBF2 JASPAR yes 21259082
chr17 55211052 55211062 SREBF1 JASPAR yes 54929695
chr17 55211052 55211062 SREBF2 JASPAR yes 54929696
chr17 55211052 55211066 JUN JASPAR yes 21259083
chr17 55211052 55211066 JUN JASPAR yes 54929697
chr17 55211053 55211061 MGA JASPAR yes 21259084
chr17 55211053 55211061 MGA JASPAR yes 54929698
chr17 55211055 55211066 FOSL2 JASPAR yes 21259085
chr17 55211055 55211066 JUNB JASPAR yes 21259086
chr17 55211055 55211066 FOSL2 JASPAR yes 54929699
chr17 55211055 55211066 JUNB JASPAR yes 54929700
chr17 55211056 55211067 FOS JASPAR yes 21259087
chr17 55211056 55211067 FOSL1 JASPAR yes 21259088
chr17 55211056 55211067 JUND JASPAR yes 21259089
chr17 55211056 55211067 FOS JASPAR yes 54929701
chr17 55211056 55211067 FOSL1 JASPAR yes 54929702
chr17 55211056 55211067 JUND JASPAR yes 54929703
chr17 55211057 55211064 JUN TRANSFAC yes 21259090
chr17 55211057 55211064 JUN TRANSFAC yes 54929704
chr17 55211093 55211101 MEIS2 JASPAR yes 21259091
chr17 55211093 55211101 MEIS3 JASPAR yes 21259092
chr17 55211093 55211101 MEIS2 JASPAR yes 54929705
chr17 55211093 55211101 MEIS3 JASPAR yes 54929706
chr17 55211094 55211098 NFE TRANSFAC yes 21259093
chr17 55211094 55211098 NFE TRANSFAC yes 54929707
chr17 55211094 55211101 MEIS1 JASPAR yes 21259094
chr17 55211094 55211101 MEIS1 JASPAR yes 54929708
chr17 55211096 55211108 HNF1B JASPAR yes 21259095
chr17 55211096 55211108 HNF1B JASPAR yes 54929709
chr17 55211099 55211107 HOXA5 JASPAR yes 21259096
chr17 55211099 55211107 HOXA5 JASPAR yes 54929710
chr17 55211100 55211114 GLIS3 JASPAR yes 21259097
chr17 55211100 55211114 GLIS3 JASPAR yes 54929711
chr17 55211137 55211147 ELK1 JASPAR yes 21259098
chr17 55211137 55211147 ELK1 JASPAR yes 54929712
chr17 55211137 55211152 HSF1 JASPAR yes 21259099
chr17 55211137 55211152 HSF1 JASPAR yes 54929713
chr17 55211141 55211147 ETS1 JASPAR yes 21259100
chr17 55211141 55211147 SPI1 JASPAR yes 21259101
chr17 55211141 55211147 ETS1 JASPAR yes 54929714
chr17 55211141 55211147 SPI1 JASPAR yes 54929715
chr17 55211146 55211157 GCM1 JASPAR yes 21259102
chr17 55211146 55211157 GCM1 JASPAR yes 54929716
chr17 55211188 55211193 GATA2 JASPAR yes 21259103
chr17 55211188 55211193 GATA2 JASPAR yes 54929717
chr17 55211202 55211206 H4TF2 TRANSFAC yes 21259104
chr17 55211202 55211206 H4TF2 TRANSFAC yes 54929718
chr17 55211208 55211213 ETS2 TRANSFAC yes 21259105
chr17 55211208 55211213 ETS2 TRANSFAC yes 54929719
chr17 55211208 55211219 NFKB1 JASPAR yes 21259106
chr17 55211208 55211219 NFKB1 JASPAR yes 54929720
chr17 55211221 55211225 YY1 TRANSFAC yes 21259107
chr17 55211221 55211225 YY1 TRANSFAC yes 54929721
chr17 55211239 55211252 HSF2 JASPAR yes 21259108
chr17 55211239 55211252 HSF2 JASPAR yes 54929722
chr17 55211240 55211256 SOX8 JASPAR yes 21259109
chr17 55211240 55211256 SOX8 JASPAR yes 54929723
chr17 55211244 55211257 HSF2 JASPAR yes 21259110
chr17 55211244 55211257 HSF2 JASPAR yes 54929724
chr17 55211252 55211273 IRF1 JASPAR yes 21259111
chr17 55211252 55211273 IRF1 JASPAR yes 54929725
chr17 55211253 55211259 LEF1 TRANSFAC yes 21259112
chr17 55211253 55211259 SOX10 JASPAR yes 21259113
chr17 55211253 55211259 LEF1 TRANSFAC yes 54929726
chr17 55211253 55211259 SOX10 JASPAR yes 54929727
chr17 55211254 55211269 STAT2 JASPAR yes 21259114
chr17 55211254 55211269 STAT2 JASPAR yes 54929728
chr17 55211255 55211269 STAT1 JASPAR yes 21259115
chr17 55211255 55211269 STAT1 JASPAR yes 54929729
chr17 55211256 55211277 IRF1 JASPAR yes 21259116
chr17 55211256 55211277 IRF1 JASPAR yes 54929730
chr17 55211257 55211272 FOXP1 JASPAR yes 21259117
chr17 55211257 55211272 FOXP1 JASPAR yes 54929731
chr17 55211261 55211282 IRF1 JASPAR yes 21259118
chr17 55211261 55211282 ZNF263 JASPAR yes 21259119
chr17 55211261 55211282 IRF1 JASPAR yes 54929732
chr17 55211261 55211282 ZNF263 JASPAR yes 54929733
chr17 55211263 55211278 PRDM1 JASPAR yes 21259120
chr17 55211263 55211278 STAT2 JASPAR yes 21259121
chr17 55211263 55211278 PRDM1 JASPAR yes 54929734
chr17 55211263 55211278 STAT2 JASPAR yes 54929735
chr17 55211264 55211278 SPIC JASPAR yes 21259122
chr17 55211264 55211278 STAT1 JASPAR yes 21259123
chr17 55211264 55211278 SPIC JASPAR yes 54929736
chr17 55211264 55211278 STAT1 JASPAR yes 54929737
chr17 55211266 55211287 ZNF263 JASPAR yes 21259124
chr17 55211266 55211287 ZNF263 JASPAR yes 54929738
chr17 55211267 55211288 IRF1 JASPAR yes 21259125
chr17 55211267 55211288 IRF1 JASPAR yes 54929739
chr17 55211268 55211283 FOXP1 JASPAR yes 21259126
chr17 55211268 55211283 FOXP1 JASPAR yes 54929740
chr17 55211269 55211290 ZNF263 JASPAR yes 21259127
chr17 55211269 55211290 ZNF263 JASPAR yes 54929741
chr17 55211270 55211291 ZNF263 JASPAR yes 21259128
chr17 55211270 55211291 ZNF263 JASPAR yes 54929742
chr17 55211273 55211294 ZNF263 JASPAR yes 21259129
chr17 55211273 55211294 ZNF263 JASPAR yes 54929743
chr17 55211274 55211295 ZNF263 JASPAR yes 21259130
chr17 55211274 55211295 ZNF263 JASPAR yes 54929744
chr17 55211275 55211280 ETS2 TRANSFAC yes 21259131
chr17 55211275 55211280 ETS2 TRANSFAC yes 54929745
chr17 55211278 55211299 ZNF263 JASPAR yes 21259132
chr17 55211278 55211299 ZNF263 JASPAR yes 54929746
chr17 55211279 55211300 ZNF263 JASPAR yes 21259133
chr17 55211279 55211300 ZNF263 JASPAR yes 54929747
SNP sites on vista25221[chr17:55210991-55211279]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55211024 rs117391980 C T
MEF2A MEF2B MEF2D TFAP2A TFAP2C
4947079
chr17 55211101 rs142640671 A G
GLIS3 HNF1B HOXA5 MEIS1 MEIS2 MEIS3
4947080
Genes possibly regulated by vista25221[chr17:55210991-55211279]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55162453 55198710 + AKAP1 ENSG00000121057.8 55162453 0.68 1.0 16071 51462
Expression level of Genes
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miRNAs possibly regulated by vista25221[chr17:55210991-55211279]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results