EnhancerDB
  1. Home
  2. Enhancers
  3. vista25224[chr17:55432914-55433044]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25224[chr17:55432914-55433044]
Back to top
Tissue distribution of vista25224
Back to top
Transcription factor that possibly regulate vista25224[chr17:55432914-55433044]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55432854 55433108 RUNX3 UCSC Txn Factor no Conserved 108273769
chr17 55432922 55432938 ZNF143 JASPAR yes 21259216
chr17 55432922 55432938 ZNF143 JASPAR yes 54945568
chr17 55432930 55432936 HiNF-A TRANSFAC yes 21259217
chr17 55432930 55432936 HiNF-A TRANSFAC yes 54945569
chr17 55432948 55432952 TEAD2 TRANSFAC yes 21259218
chr17 55432948 55432952 TEAD2 TRANSFAC yes 54945570
chr17 55432951 55432961 MAX JASPAR yes 21259219
chr17 55432951 55432961 MAX JASPAR yes 54945571
chr17 55432951 55432962 USF1 JASPAR yes 21259220
chr17 55432951 55432962 USF2 JASPAR yes 21259221
chr17 55432951 55432962 USF1 JASPAR yes 54945572
chr17 55432951 55432962 USF2 JASPAR yes 54945573
chr17 55432952 55432962 TFEB JASPAR yes 21259222
chr17 55432952 55432962 TFEC JASPAR yes 21259223
chr17 55432952 55432962 TFEB JASPAR yes 54945574
chr17 55432952 55432962 TFEC JASPAR yes 54945575
chr17 55432962 55432978 RFX4 JASPAR yes 21259224
chr17 55432962 55432978 RFX4 JASPAR yes 54945576
chr17 55432965 55432976 RUNX1 JASPAR yes 21259225
chr17 55432965 55432976 RUNX1 JASPAR yes 54945577
chr17 55432987 55432997 MAX JASPAR yes 21259226
chr17 55432987 55432997 MAX JASPAR yes 54945578
chr17 55432987 55432998 USF2 JASPAR yes 21259227
chr17 55432987 55432998 USF2 JASPAR yes 54945579
chr17 55432988 55432998 TFE3 JASPAR yes 21259228
chr17 55432988 55432998 TFEB JASPAR yes 21259229
chr17 55432988 55432998 TFEC JASPAR yes 21259230
chr17 55432988 55432998 TFE3 JASPAR yes 54945580
chr17 55432988 55432998 TFEB JASPAR yes 54945581
chr17 55432988 55432998 TFEC JASPAR yes 54945582
chr17 55432988 55432999 USF1 JASPAR yes 21259231
chr17 55432988 55432999 USF1 JASPAR yes 54945583
chr17 55433025 55433031 SP1 TRANSFAC yes 21259232
chr17 55433025 55433031 SP1 TRANSFAC yes 54945584
chr17 55433044 55433059 MEF2A JASPAR yes 21259233
chr17 55433044 55433059 MEF2A JASPAR yes 54945585
SNP sites on vista25224[chr17:55432914-55433044]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55432970 rs792380 G A
RFX4 RUNX1 RUNX3
4948823
chr17 55433013 rs140959084 G C
RUNX3
4948824
Genes possibly regulated by vista25224[chr17:55432914-55433044]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55333212 55762046 + MSI2 ENSG00000153944.6 55333212 0.78 0.99 16072 298
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25224[chr17:55432914-55433044]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results