EnhancerDB
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  3. vista25226[chr17:55447287-55447561]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25226[chr17:55447287-55447561]
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Tissue distribution of vista25226
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Transcription factor that possibly regulate vista25226[chr17:55447287-55447561]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55447343 55447898 EP300 UCSC Txn Factor no Conserved 108273919
chr17 55447561 55447862 TEAD4 UCSC Txn Factor no Conserved 108273939
chr17 55447301 55447305 YY1 TRANSFAC yes 21259280
chr17 55447301 55447305 YY1 TRANSFAC yes 54947253
chr17 55447307 55447322 MEF2C JASPAR yes 21259281
chr17 55447307 55447322 MEF2C JASPAR yes 54947254
chr17 55447308 55447311 MYB TRANSFAC yes 21259282
chr17 55447308 55447311 MYB TRANSFAC yes 54947255
chr17 55447329 55447340 ESRRA JASPAR yes 21259283
chr17 55447329 55447340 ESRRA JASPAR yes 54947256
chr17 55447333 55447337 LFA1 TRANSFAC yes 21259284
chr17 55447333 55447337 LFA1 TRANSFAC yes 54947257
chr17 55447341 55447346 GATA2 JASPAR yes 21259285
chr17 55447341 55447346 GATA2 JASPAR yes 54947258
chr17 55447350 55447359 SRY JASPAR yes 21259286
chr17 55447350 55447359 SRY JASPAR yes 54947259
chr17 55447355 55447358 MYB TRANSFAC yes 21259287
chr17 55447355 55447358 MYB TRANSFAC yes 54947260
chr17 55447377 55447387 POU6F2 JASPAR yes 21259288
chr17 55447377 55447387 POU6F2 JASPAR yes 54947261
chr17 55447378 55447388 ALX3 JASPAR yes 21259289
chr17 55447378 55447388 EMX2 JASPAR yes 21259290
chr17 55447378 55447388 ESX1 JASPAR yes 21259291
chr17 55447378 55447388 GBX2 JASPAR yes 21259292
chr17 55447378 55447388 GSX1 JASPAR yes 21259293
chr17 55447378 55447388 GSX2 JASPAR yes 21259294
chr17 55447378 55447388 HESX1 JASPAR yes 21259295
chr17 55447378 55447388 HOXB2 JASPAR yes 21259296
chr17 55447378 55447388 HOXB3 JASPAR yes 21259297
chr17 55447378 55447388 LBX2 JASPAR yes 21259298
chr17 55447378 55447388 LHX2 JASPAR yes 21259299
chr17 55447378 55447388 LHX6 JASPAR yes 21259300
chr17 55447378 55447388 MEOX1 JASPAR yes 21259301
chr17 55447378 55447388 MEOX2 JASPAR yes 21259302
chr17 55447378 55447388 MIXL1 JASPAR yes 21259303
chr17 55447378 55447388 MNX1 JASPAR yes 21259304
chr17 55447378 55447388 NOTO JASPAR yes 21259305
chr17 55447378 55447388 POU6F1 JASPAR yes 21259306
chr17 55447378 55447388 RAX JASPAR yes 21259307
chr17 55447378 55447388 ALX3 JASPAR yes 54947262
chr17 55447378 55447388 EMX2 JASPAR yes 54947263
chr17 55447378 55447388 ESX1 JASPAR yes 54947264
chr17 55447378 55447388 GBX2 JASPAR yes 54947265
chr17 55447378 55447388 GSX1 JASPAR yes 54947266
chr17 55447378 55447388 GSX2 JASPAR yes 54947267
chr17 55447378 55447388 HESX1 JASPAR yes 54947268
chr17 55447378 55447388 HOXB2 JASPAR yes 54947269
chr17 55447378 55447388 HOXB3 JASPAR yes 54947270
chr17 55447378 55447388 LBX2 JASPAR yes 54947271
chr17 55447378 55447388 LHX2 JASPAR yes 54947272
chr17 55447378 55447388 LHX6 JASPAR yes 54947273
chr17 55447378 55447388 MEOX1 JASPAR yes 54947274
chr17 55447378 55447388 MEOX2 JASPAR yes 54947275
chr17 55447378 55447388 MIXL1 JASPAR yes 54947276
chr17 55447378 55447388 MNX1 JASPAR yes 54947277
chr17 55447378 55447388 NOTO JASPAR yes 54947278
chr17 55447378 55447388 POU6F1 JASPAR yes 54947279
chr17 55447378 55447388 RAX JASPAR yes 54947280
chr17 55447378 55447389 HOXA10 JASPAR yes 21259308
chr17 55447378 55447389 HOXA10 JASPAR yes 54947281
chr17 55447379 55447387 BSX JASPAR yes 21259309
chr17 55447379 55447387 DLX6 JASPAR yes 21259310
chr17 55447379 55447387 EN1 JASPAR yes 21259311
chr17 55447379 55447387 ISX JASPAR yes 21259312
chr17 55447379 55447387 LBX1 JASPAR yes 21259313
chr17 55447379 55447387 LHX9 JASPAR yes 21259314
chr17 55447379 55447387 LMX1A JASPAR yes 21259315
chr17 55447379 55447387 LMX1B JASPAR yes 21259316
chr17 55447379 55447387 NKX6-1 JASPAR yes 21259317
chr17 55447379 55447387 NKX6-2 JASPAR yes 21259318
chr17 55447379 55447387 PAX4 JASPAR yes 21259319
chr17 55447379 55447387 PDX1 JASPAR yes 21259320
chr17 55447379 55447387 PRRX1 JASPAR yes 21259321
chr17 55447379 55447387 RAX2 JASPAR yes 21259322
chr17 55447379 55447387 SHOX JASPAR yes 21259323
chr17 55447379 55447387 UNCX JASPAR yes 21259324
chr17 55447379 55447387 VAX1 JASPAR yes 21259325
chr17 55447379 55447387 VAX2 JASPAR yes 21259326
chr17 55447379 55447387 VSX1 JASPAR yes 21259327
chr17 55447379 55447387 VSX2 JASPAR yes 21259328
chr17 55447379 55447387 BSX JASPAR yes 54947282
chr17 55447379 55447387 DLX6 JASPAR yes 54947283
chr17 55447379 55447387 EN1 JASPAR yes 54947284
chr17 55447379 55447387 ISX JASPAR yes 54947285
chr17 55447379 55447387 LBX1 JASPAR yes 54947286
chr17 55447379 55447387 LHX9 JASPAR yes 54947287
chr17 55447379 55447387 LMX1A JASPAR yes 54947288
chr17 55447379 55447387 LMX1B JASPAR yes 54947289
chr17 55447379 55447387 NKX6-1 JASPAR yes 54947290
chr17 55447379 55447387 NKX6-2 JASPAR yes 54947291
chr17 55447379 55447387 PAX4 JASPAR yes 54947292
chr17 55447379 55447387 PDX1 JASPAR yes 54947293
chr17 55447379 55447387 PRRX1 JASPAR yes 54947294
chr17 55447379 55447387 RAX2 JASPAR yes 54947295
chr17 55447379 55447387 SHOX JASPAR yes 54947296
chr17 55447379 55447387 UNCX JASPAR yes 54947297
chr17 55447379 55447387 VAX1 JASPAR yes 54947298
chr17 55447379 55447387 VAX2 JASPAR yes 54947299
chr17 55447379 55447387 VSX1 JASPAR yes 54947300
chr17 55447379 55447387 VSX2 JASPAR yes 54947301
chr17 55447379 55447389 HOXB13 JASPAR yes 21259329
chr17 55447379 55447389 HOXD13 JASPAR yes 21259330
chr17 55447379 55447389 HOXB13 JASPAR yes 54947302
chr17 55447379 55447389 HOXD13 JASPAR yes 54947303
chr17 55447385 55447397 IRF1 JASPAR yes 21259331
chr17 55447385 55447397 IRF1 JASPAR yes 54947304
chr17 55447407 55447411 NFE TRANSFAC yes 21259332
chr17 55447407 55447411 NFE TRANSFAC yes 54947305
chr17 55447418 55447426 BARX1 JASPAR yes 21259333
chr17 55447418 55447426 BARX1 JASPAR yes 54947306
chr17 55447425 55447437 FOXC2 JASPAR yes 21259334
chr17 55447425 55447437 FOXC2 JASPAR yes 54947307
chr17 55447430 55447448 IRF2 JASPAR yes 21259335
chr17 55447430 55447448 IRF2 JASPAR yes 54947308
chr17 55447433 55447447 PAX6 JASPAR yes 21259336
chr17 55447433 55447447 PAX6 JASPAR yes 54947309
chr17 55447466 55447478 PBX1 JASPAR yes 21259337
chr17 55447466 55447478 PBX1 JASPAR yes 54947310
chr17 55447466 55447481 HNF1A JASPAR yes 21259338
chr17 55447466 55447481 HNF1A JASPAR yes 54947311
chr17 55447467 55447480 HNF1B JASPAR yes 21259339
chr17 55447467 55447480 HNF1B JASPAR yes 54947312
chr17 55447467 55447481 POU4F1 JASPAR yes 21259340
chr17 55447467 55447481 POU4F1 JASPAR yes 54947313
chr17 55447467 55447483 POU4F3 JASPAR yes 21259341
chr17 55447467 55447483 POU4F3 JASPAR yes 54947314
chr17 55447468 55447480 HNF1B JASPAR yes 21259342
chr17 55447468 55447480 HNF1B JASPAR yes 54947315
chr17 55447476 55447479 MYB TRANSFAC yes 21259343
chr17 55447476 55447479 MYB TRANSFAC yes 54947316
chr17 55447498 55447513 NFYB JASPAR yes 21259344
chr17 55447498 55447513 NFYB JASPAR yes 54947317
chr17 55447527 55447544 RXRA JASPAR yes 21259345
chr17 55447527 55447544 RXRA JASPAR yes 54947318
chr17 55447533 55447543 SP1 JASPAR yes 21259346
chr17 55447533 55447543 SP1 JASPAR yes 54947319
chr17 55447543 55447558 AR JASPAR yes 21259347
chr17 55447543 55447558 AR JASPAR yes 54947320
chr17 55447556 55447576 TP63 JASPAR yes 21259348
chr17 55447556 55447576 TP63 JASPAR yes 54947321
chr17 55447557 55447575 TP53 JASPAR yes 21259349
chr17 55447557 55447575 TP53 JASPAR yes 54947322
chr17 55447558 55447573 TP53 JASPAR yes 21259350
chr17 55447558 55447573 TP53 JASPAR yes 54947323
chr17 55447558 55447578 TP53 JASPAR yes 21259351
chr17 55447558 55447578 TP53 JASPAR yes 54947324
SNP sites on vista25226[chr17:55447287-55447561]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55447314 rs531093045 A C
MEF2C
4948989
chr17 55447443 rs792367 G A
EP300 IRF2 PAX6
4948990
chr17 55447456 rs9905136 C T
EP300
4948991
chr17 55447464 rs528150897 G A,T
EP300
4948992
Genes possibly regulated by vista25226[chr17:55447287-55447561]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25226[chr17:55447287-55447561]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results