EnhancerDB
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  3. vista25228[chr17:55472969-55473349]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25228[chr17:55472969-55473349]
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Tissue distribution of vista25228
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Transcription factor that possibly regulate vista25228[chr17:55472969-55473349]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55472983 55472988 TFAP2A TRANSFAC yes 21259391
chr17 55472983 55472988 TFAP2A TRANSFAC yes 54950556
chr17 55472983 55472989 MZF1 JASPAR yes 21259392
chr17 55472983 55472989 MZF1 JASPAR yes 54950557
chr17 55473028 55473047 REST JASPAR yes 21259393
chr17 55473028 55473047 REST JASPAR yes 54950558
chr17 55473050 55473056 SOX10 JASPAR yes 21259394
chr17 55473050 55473056 SOX10 JASPAR yes 54950559
chr17 55473055 55473060 NFY TRANSFAC yes 21259395
chr17 55473055 55473060 NFY TRANSFAC yes 54950560
chr17 55473103 55473109 NFIC JASPAR yes 21259396
chr17 55473103 55473109 NFIC JASPAR yes 54950561
chr17 55473118 55473123 H4TF1 TRANSFAC yes 21259397
chr17 55473118 55473123 H4TF1 TRANSFAC yes 54950562
chr17 55473151 55473157 TCF4 TRANSFAC yes 21259398
chr17 55473151 55473157 TCF4 TRANSFAC yes 54950563
chr17 55473218 55473222 NFE TRANSFAC yes 21259399
chr17 55473218 55473222 NFE TRANSFAC yes 54950564
chr17 55473227 55473230 MYB TRANSFAC yes 21259400
chr17 55473227 55473230 MYB TRANSFAC yes 54950565
chr17 55473244 55473254 HMBOX1 JASPAR yes 21259401
chr17 55473244 55473254 HMBOX1 JASPAR yes 54950566
chr17 55473245 55473253 LBX1 JASPAR yes 21259402
chr17 55473245 55473253 LBX1 JASPAR yes 54950567
chr17 55473246 55473249 MYB TRANSFAC yes 21259403
chr17 55473246 55473249 MYB TRANSFAC yes 54950568
chr17 55473279 55473286 NFATC2 JASPAR yes 21259404
chr17 55473279 55473286 NFATC2 JASPAR yes 54950569
chr17 55473289 55473298 SOX9 JASPAR yes 21259405
chr17 55473289 55473298 SOX9 JASPAR yes 54950570
chr17 55473289 55473304 ZIC3 JASPAR yes 21259406
chr17 55473289 55473304 ZIC4 JASPAR yes 21259407
chr17 55473289 55473304 ZIC3 JASPAR yes 54950571
chr17 55473289 55473304 ZIC4 JASPAR yes 54950572
chr17 55473290 55473304 ZIC1 JASPAR yes 21259408
chr17 55473290 55473304 ZIC1 JASPAR yes 54950573
chr17 55473295 55473300 TFAP2A TRANSFAC yes 21259409
chr17 55473295 55473300 TFAP2A TRANSFAC yes 54950574
chr17 55473295 55473301 MZF1 JASPAR yes 21259410
chr17 55473295 55473301 MZF1 JASPAR yes 54950575
chr17 55473295 55473316 ZNF263 JASPAR yes 21259411
chr17 55473295 55473316 ZNF263 JASPAR yes 54950576
chr17 55473341 55473345 YY1 TRANSFAC yes 21259412
chr17 55473341 55473345 YY1 TRANSFAC yes 54950577
chr17 55473346 55473349 MYB TRANSFAC yes 21259413
chr17 55473346 55473349 MYB TRANSFAC yes 54950578
SNP sites on vista25228[chr17:55472969-55473349]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55473007 rs116600922 G A no 4949266
chr17 55473039 rs2165856 T A
REST
4949267
chr17 55473186 rs116473263 A G no 4949268
chr17 55473198 rs193162760 C T no 4949269
Genes possibly regulated by vista25228[chr17:55472969-55473349]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25228[chr17:55472969-55473349]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results