EnhancerDB
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  3. vista25229[chr17:55477911-55478459]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25229[chr17:55477911-55478459]
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Tissue distribution of vista25229
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Transcription factor that possibly regulate vista25229[chr17:55477911-55478459]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55477901 55477914 ELF1 JASPAR yes 21259414
chr17 55477901 55477914 ELF1 JASPAR yes 54950994
chr17 55477902 55477914 EHF JASPAR yes 21259415
chr17 55477902 55477914 EHF JASPAR yes 54950995
chr17 55477902 55477915 ELF3 JASPAR yes 21259416
chr17 55477902 55477915 ELF3 JASPAR yes 54950996
chr17 55477903 55477914 ELF5 JASPAR yes 21259417
chr17 55477903 55477914 ELF5 JASPAR yes 54950997
chr17 55477904 55477914 ETV6 JASPAR yes 21259418
chr17 55477904 55477914 ETV6 JASPAR yes 54950999
chr17 55477904 55477915 FLI1 JASPAR yes 21259419
chr17 55477904 55477915 FLI1 JASPAR yes 54951000
chr17 55477905 55477913 EHF JASPAR yes 21259420
chr17 55477905 55477913 EHF JASPAR yes 54951001
chr17 55477906 55477913 SPI1 JASPAR yes 21259421
chr17 55477906 55477913 SPI1 JASPAR yes 54951002
chr17 55477912 55477915 MYB TRANSFAC yes 21259422
chr17 55477912 55477915 MYB TRANSFAC yes 54951003
chr17 55477952 55477957 GATA2 JASPAR yes 21259423
chr17 55477952 55477957 GATA2 JASPAR yes 54951004
chr17 55477966 55477978 INSM1 JASPAR yes 21259424
chr17 55477966 55477978 INSM1 JASPAR yes 54951005
chr17 55477994 55477997 MYB TRANSFAC yes 21259425
chr17 55477994 55477997 MYB TRANSFAC yes 54951006
chr17 55478004 55478016 PBX1 JASPAR yes 21259426
chr17 55478004 55478016 PBX1 JASPAR yes 54951007
chr17 55478007 55478022 HNF1A JASPAR yes 21259427
chr17 55478007 55478022 HNF1A JASPAR yes 54951008
chr17 55478008 55478021 HNF1B JASPAR yes 21259428
chr17 55478008 55478021 HNF1B JASPAR yes 54951009
chr17 55478017 55478020 MYB TRANSFAC yes 21259429
chr17 55478017 55478020 MYB TRANSFAC yes 54951010
chr17 55478018 55478033 MEF2C JASPAR yes 21259430
chr17 55478018 55478033 MEF2C JASPAR yes 54951011
chr17 55478020 55478034 POU1F1 JASPAR yes 21259431
chr17 55478020 55478034 POU1F1 JASPAR yes 54951012
chr17 55478021 55478025 YY1 TRANSFAC yes 21259432
chr17 55478021 55478025 YY1 TRANSFAC yes 54951013
chr17 55478054 55478060 PEA3 TRANSFAC yes 21259433
chr17 55478054 55478060 PEA3 TRANSFAC yes 54951014
chr17 55478055 55478063 EHF JASPAR yes 21259434
chr17 55478055 55478063 EHF JASPAR yes 54951015
chr17 55478108 55478129 ZNF263 JASPAR yes 21259435
chr17 55478108 55478129 ZNF263 JASPAR yes 54951016
chr17 55478143 55478148 TFAP2A TRANSFAC yes 21259436
chr17 55478143 55478148 TFAP2A TRANSFAC yes 54951017
chr17 55478143 55478149 MZF1 JASPAR yes 21259437
chr17 55478143 55478149 MZF1 JASPAR yes 54951018
chr17 55478144 55478154 GSC2 JASPAR yes 21259438
chr17 55478144 55478154 GSC JASPAR yes 21259439
chr17 55478144 55478154 GSC2 JASPAR yes 54951019
chr17 55478144 55478154 GSC JASPAR yes 54951020
chr17 55478145 55478153 OTX1 JASPAR yes 21259440
chr17 55478145 55478153 OTX1 JASPAR yes 54951021
chr17 55478145 55478154 PITX3 JASPAR yes 21259441
chr17 55478145 55478154 PITX3 JASPAR yes 54951022
chr17 55478175 55478181 JUN TRANSFAC yes 21259442
chr17 55478175 55478181 JUN TRANSFAC yes 54951023
chr17 55478179 55478193 JUN JASPAR yes 21259443
chr17 55478179 55478193 JUN JASPAR yes 54951024
chr17 55478181 55478192 BATF JASPAR yes 21259444
chr17 55478181 55478192 BATF JASPAR yes 54951025
chr17 55478183 55478194 FOS JASPAR yes 21259445
chr17 55478183 55478194 JUND JASPAR yes 21259446
chr17 55478183 55478194 FOS JASPAR yes 54951026
chr17 55478183 55478194 JUND JASPAR yes 54951027
chr17 55478184 55478195 JUNB JASPAR yes 21259447
chr17 55478184 55478195 JUNB JASPAR yes 54951028
chr17 55478185 55478191 JUN TRANSFAC yes 21259448
chr17 55478185 55478191 JUN TRANSFAC yes 54951029
chr17 55478190 55478201 ETV2 JASPAR yes 21259449
chr17 55478190 55478201 ETV2 JASPAR yes 54951030
chr17 55478191 55478201 ERF JASPAR yes 21259450
chr17 55478191 55478201 ERG JASPAR yes 21259451
chr17 55478191 55478201 ETS1 JASPAR yes 21259452
chr17 55478191 55478201 FLI1 JASPAR yes 21259453
chr17 55478191 55478201 ERF JASPAR yes 54951031
chr17 55478191 55478201 ERG JASPAR yes 54951032
chr17 55478191 55478201 ETS1 JASPAR yes 54951033
chr17 55478191 55478201 FLI1 JASPAR yes 54951034
chr17 55478191 55478202 FLI1 JASPAR yes 21259454
chr17 55478191 55478202 FLI1 JASPAR yes 54951035
chr17 55478192 55478200 FEV JASPAR yes 21259455
chr17 55478192 55478200 FEV JASPAR yes 54951036
chr17 55478205 55478211 PEA3 TRANSFAC yes 21259456
chr17 55478205 55478211 PEA3 TRANSFAC yes 54951037
chr17 55478218 55478224 SOX10 JASPAR yes 21259457
chr17 55478218 55478224 SOX10 JASPAR yes 54951038
chr17 55478228 55478240 GLI2 JASPAR yes 21259458
chr17 55478228 55478240 GLI2 JASPAR yes 54951039
chr17 55478238 55478248 ID4 JASPAR yes 21259459
chr17 55478238 55478248 TCF3 JASPAR yes 21259460
chr17 55478238 55478248 TCF4 JASPAR yes 21259461
chr17 55478238 55478248 ID4 JASPAR yes 54951040
chr17 55478238 55478248 TCF3 JASPAR yes 54951041
chr17 55478238 55478248 TCF4 JASPAR yes 54951042
chr17 55478240 55478249 ZEB1 JASPAR yes 21259462
chr17 55478240 55478249 ZEB1 JASPAR yes 54951043
chr17 55478241 55478249 TBX15 JASPAR yes 21259463
chr17 55478241 55478249 TBX4 JASPAR yes 21259464
chr17 55478241 55478249 TBX15 JASPAR yes 54951044
chr17 55478241 55478249 TBX4 JASPAR yes 54951045
chr17 55478249 55478253 ESR1 TRANSFAC yes 21259465
chr17 55478249 55478253 ESR1 TRANSFAC yes 54951046
chr17 55478280 55478299 REST JASPAR yes 21259466
chr17 55478280 55478299 REST JASPAR yes 54951047
chr17 55478288 55478303 AR JASPAR yes 21259467
chr17 55478288 55478303 AR JASPAR yes 54951048
chr17 55478312 55478331 REST JASPAR yes 21259468
chr17 55478312 55478331 REST JASPAR yes 54951049
chr17 55478329 55478343 MTF1 JASPAR yes 21259469
chr17 55478329 55478343 MTF1 JASPAR yes 54951050
chr17 55478339 55478343 YY1 TRANSFAC yes 21259470
chr17 55478339 55478343 YY1 TRANSFAC yes 54951051
chr17 55478348 55478355 MEIS1 JASPAR yes 21259471
chr17 55478348 55478355 MEIS1 JASPAR yes 54951052
chr17 55478348 55478356 MEIS2 JASPAR yes 21259472
chr17 55478348 55478356 MEIS3 JASPAR yes 21259473
chr17 55478348 55478356 MEIS2 JASPAR yes 54951053
chr17 55478348 55478356 MEIS3 JASPAR yes 54951054
chr17 55478348 55478360 GRHL1 JASPAR yes 21259474
chr17 55478348 55478360 GRHL1 JASPAR yes 54951055
chr17 55478355 55478375 RREB1 JASPAR yes 21259475
chr17 55478355 55478375 RREB1 JASPAR yes 54951056
chr17 55478360 55478366 ZNF354C JASPAR yes 21259476
chr17 55478360 55478366 ZNF354C JASPAR yes 54951057
chr17 55478370 55478379 THAP1 JASPAR yes 21259477
chr17 55478370 55478379 THAP1 JASPAR yes 54951058
chr17 55478373 55478377 LFA1 TRANSFAC yes 21259478
chr17 55478373 55478377 LFA1 TRANSFAC yes 54951059
chr17 55478382 55478395 POU2F2 JASPAR yes 21259479
chr17 55478382 55478395 POU2F2 JASPAR yes 54951060
chr17 55478390 55478394 YY1 TRANSFAC yes 21259480
chr17 55478390 55478394 YY1 TRANSFAC yes 54951061
chr17 55478402 55478408 TCF4 TRANSFAC yes 21259481
chr17 55478402 55478408 TCF4 TRANSFAC yes 54951062
chr17 55478413 55478419 MYC TRANSFAC yes 21259482
chr17 55478413 55478419 MYC TRANSFAC yes 54951063
chr17 55478419 55478434 MEF2C JASPAR yes 21259483
chr17 55478419 55478434 MEF2C JASPAR yes 54951064
chr17 55478420 55478435 MEF2A JASPAR yes 21259484
chr17 55478420 55478435 MEF2A JASPAR yes 54951065
chr17 55478422 55478432 MEF2A JASPAR yes 21259485
chr17 55478422 55478432 MEF2A JASPAR yes 54951066
chr17 55478435 55478446 USF1 JASPAR yes 21259486
chr17 55478435 55478446 USF2 JASPAR yes 21259487
chr17 55478435 55478446 USF1 JASPAR yes 54951067
chr17 55478435 55478446 USF2 JASPAR yes 54951068
chr17 55478436 55478446 MAX JASPAR yes 21259488
chr17 55478436 55478446 MAX JASPAR yes 54951069
SNP sites on vista25229[chr17:55477911-55478459]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55477930 rs62060393 G A no 4949305
chr17 55478076 rs544934336 G A no 4949306
chr17 55478173 rs140693062 G C no 4949307
chr17 55478251 rs186635361 G A
ESR1
4949308
chr17 55478291 rs551846545 G A
AR REST
4949309
chr17 55478413 rs189716502 G A
MYC
4949310
Genes possibly regulated by vista25229[chr17:55477911-55478459]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25229[chr17:55477911-55478459]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results