EnhancerDB
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  3. vista25237[chr17:55604990-55605123]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25237[chr17:55604990-55605123]
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Tissue distribution of vista25237
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Transcription factor that possibly regulate vista25237[chr17:55604990-55605123]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55604978 55604993 RFX5 JASPAR yes 21259845
chr17 55604978 55604993 RFX5 JASPAR yes 54964870
chr17 55604997 55605003 HiNF-A TRANSFAC yes 21259846
chr17 55604997 55605003 HiNF-A TRANSFAC yes 54964872
chr17 55605002 55605007 TFAP2A TRANSFAC yes 21259847
chr17 55605002 55605007 TFAP2A TRANSFAC yes 54964873
chr17 55605002 55605008 MZF1 JASPAR yes 21259848
chr17 55605002 55605008 MZF1 JASPAR yes 54964874
chr17 55605002 55605023 ZNF263 JASPAR yes 21259849
chr17 55605002 55605023 ZNF263 JASPAR yes 54964875
chr17 55605009 55605023 SPIC JASPAR yes 21259850
chr17 55605009 55605023 SPIC JASPAR yes 54964876
chr17 55605013 55605026 NFKB1 JASPAR yes 21259851
chr17 55605013 55605026 NFKB1 JASPAR yes 54964877
chr17 55605014 55605025 NFKB1 JASPAR yes 21259852
chr17 55605014 55605025 NFKB1 JASPAR yes 54964878
chr17 55605015 55605020 ETS2 TRANSFAC yes 21259853
chr17 55605015 55605020 ETS2 TRANSFAC yes 54964879
chr17 55605015 55605026 NFKB1 JASPAR yes 21259854
chr17 55605015 55605026 NFKB1 JASPAR yes 54964880
chr17 55605016 55605026 REL JASPAR yes 21259855
chr17 55605016 55605026 REL JASPAR yes 54964881
chr17 55605028 55605048 TP63 JASPAR yes 21259856
chr17 55605028 55605048 TP63 JASPAR yes 54964882
chr17 55605033 55605044 FOXA1 JASPAR yes 21259857
chr17 55605033 55605044 FOXA1 JASPAR yes 54964883
chr17 55605034 55605049 TP53 JASPAR yes 21259858
chr17 55605034 55605049 TP53 JASPAR yes 54964884
chr17 55605039 55605053 PAX6 JASPAR yes 21259859
chr17 55605039 55605053 PAX6 JASPAR yes 54964885
chr17 55605039 55605058 PAX5 JASPAR yes 21259860
chr17 55605039 55605058 PAX5 JASPAR yes 54964886
chr17 55605048 55605067 RFX2 JASPAR yes 21259861
chr17 55605048 55605067 RFX2 JASPAR yes 54964887
chr17 55605050 55605065 RFX5 JASPAR yes 21259862
chr17 55605050 55605065 RFX5 JASPAR yes 54964888
chr17 55605060 55605080 ESR1 JASPAR yes 21259863
chr17 55605060 55605080 ESR1 JASPAR yes 54964889
chr17 55605067 55605072 SP1 TRANSFAC yes 21259864
chr17 55605067 55605072 SP1 TRANSFAC yes 54964890
chr17 55605106 55605120 TCF7L2 JASPAR yes 21259865
chr17 55605106 55605120 TCF7L2 JASPAR yes 54964891
chr17 55605115 55605125 HOXC10 JASPAR yes 21259866
chr17 55605115 55605125 HOXC10 JASPAR yes 54964892
chr17 55605115 55605126 HOXA10 JASPAR yes 21259867
chr17 55605115 55605126 HOXC11 JASPAR yes 21259868
chr17 55605115 55605126 HOXC12 JASPAR yes 21259869
chr17 55605115 55605126 HOXD12 JASPAR yes 21259870
chr17 55605115 55605126 HOXA10 JASPAR yes 54964893
chr17 55605115 55605126 HOXC11 JASPAR yes 54964894
chr17 55605115 55605126 HOXC12 JASPAR yes 54964895
chr17 55605115 55605126 HOXD12 JASPAR yes 54964896
chr17 55605116 55605125 CDX1 JASPAR yes 21259871
chr17 55605116 55605125 CDX1 JASPAR yes 54964897
chr17 55605116 55605127 CDX2 JASPAR yes 21259872
chr17 55605116 55605127 CDX2 JASPAR yes 54964898
SNP sites on vista25237[chr17:55604990-55605123]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55605031 rs139356187 G A
TP63
4950759
Genes possibly regulated by vista25237[chr17:55604990-55605123]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista25237[chr17:55604990-55605123]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results