EnhancerDB
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  3. vista25250[chr17:55801190-55801558]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25250[chr17:55801190-55801558]
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Tissue distribution of vista25250
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Transcription factor that possibly regulate vista25250[chr17:55801190-55801558]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55801208 55801214 ZNF354C JASPAR yes 21260492
chr17 55801208 55801214 ZNF354C JASPAR yes 54985001
chr17 55801231 55801235 LFA1 TRANSFAC yes 21260493
chr17 55801231 55801235 LFA1 TRANSFAC yes 54985002
chr17 55801258 55801271 NFKB1 JASPAR yes 21260494
chr17 55801258 55801271 NFKB1 JASPAR yes 54985003
chr17 55801259 55801270 NFKB1 JASPAR yes 21260495
chr17 55801259 55801270 NFKB1 JASPAR yes 54985004
chr17 55801260 55801270 NFKB1 JASPAR yes 21260496
chr17 55801260 55801270 RELA JASPAR yes 21260497
chr17 55801260 55801270 NFKB1 JASPAR yes 54985005
chr17 55801260 55801270 RELA JASPAR yes 54985006
chr17 55801279 55801289 RORA JASPAR yes 21260498
chr17 55801279 55801289 RORA JASPAR yes 54985007
chr17 55801280 55801291 ESRRA JASPAR yes 21260499
chr17 55801280 55801291 ESRRB JASPAR yes 21260500
chr17 55801280 55801291 ESRRA JASPAR yes 54985008
chr17 55801280 55801291 ESRRB JASPAR yes 54985009
chr17 55801280 55801293 NR2F1 JASPAR yes 21260501
chr17 55801280 55801293 NR2F1 JASPAR yes 54985010
chr17 55801282 55801290 NR4A2 JASPAR yes 21260502
chr17 55801282 55801290 NR4A2 JASPAR yes 54985011
chr17 55801282 55801299 ESR1 JASPAR yes 21260503
chr17 55801282 55801299 ESR1 JASPAR yes 54985012
chr17 55801282 55801300 RARA JASPAR yes 21260504
chr17 55801282 55801300 RARA JASPAR yes 54985013
chr17 55801283 55801298 ESR2 JASPAR yes 21260505
chr17 55801283 55801298 ESR2 JASPAR yes 54985014
chr17 55801284 55801288 ESR1 TRANSFAC yes 21260506
chr17 55801284 55801288 ESR1 TRANSFAC yes 54985015
chr17 55801300 55801305 SP1 TRANSFAC yes 21260507
chr17 55801300 55801305 SP1 TRANSFAC yes 54985016
chr17 55801314 55801327 SMAD2 JASPAR yes 21260508
chr17 55801314 55801327 SMAD2 JASPAR yes 54985017
chr17 55801342 55801346 H4TF2 TRANSFAC yes 21260509
chr17 55801342 55801346 H4TF2 TRANSFAC yes 54985018
chr17 55801357 55801367 GATA1 TRANSFAC yes 21260510
chr17 55801357 55801367 GATA1 TRANSFAC yes 54985019
chr17 55801361 55801379 NR3C1 JASPAR yes 21260511
chr17 55801361 55801379 NR3C1 JASPAR yes 54985020
chr17 55801371 55801375 NFE TRANSFAC yes 21260512
chr17 55801371 55801375 NFE TRANSFAC yes 54985021
chr17 55801384 55801394 NKX2-3 JASPAR yes 21260513
chr17 55801384 55801394 NKX2-3 JASPAR yes 54985022
chr17 55801385 55801394 NKX2-8 JASPAR yes 21260514
chr17 55801385 55801394 NKX2-8 JASPAR yes 54985023
chr17 55801432 55801447 MEF2A JASPAR yes 21260515
chr17 55801432 55801447 MEF2A JASPAR yes 54985024
chr17 55801434 55801444 ALX3 JASPAR yes 21260516
chr17 55801434 55801444 GSX2 JASPAR yes 21260517
chr17 55801434 55801444 MNX1 JASPAR yes 21260518
chr17 55801434 55801444 ALX3 JASPAR yes 54985025
chr17 55801434 55801444 GSX2 JASPAR yes 54985026
chr17 55801434 55801444 MNX1 JASPAR yes 54985027
chr17 55801434 55801446 MEF2A JASPAR yes 21260519
chr17 55801434 55801446 MEF2B JASPAR yes 21260520
chr17 55801434 55801446 MEF2D JASPAR yes 21260521
chr17 55801434 55801446 MEF2A JASPAR yes 54985028
chr17 55801434 55801446 MEF2B JASPAR yes 54985029
chr17 55801434 55801446 MEF2D JASPAR yes 54985030
chr17 55801435 55801443 LMX1A JASPAR yes 21260522
chr17 55801435 55801443 LMX1B JASPAR yes 21260523
chr17 55801435 55801443 NKX6-1 JASPAR yes 21260524
chr17 55801435 55801443 NKX6-2 JASPAR yes 21260525
chr17 55801435 55801443 VAX1 JASPAR yes 21260526
chr17 55801435 55801443 VAX2 JASPAR yes 21260527
chr17 55801435 55801443 VSX1 JASPAR yes 21260528
chr17 55801435 55801443 VSX2 JASPAR yes 21260529
chr17 55801435 55801443 LMX1A JASPAR yes 54985031
chr17 55801435 55801443 LMX1B JASPAR yes 54985032
chr17 55801435 55801443 NKX6-1 JASPAR yes 54985033
chr17 55801435 55801443 NKX6-2 JASPAR yes 54985034
chr17 55801435 55801443 VAX1 JASPAR yes 54985035
chr17 55801435 55801443 VAX2 JASPAR yes 54985036
chr17 55801435 55801443 VSX1 JASPAR yes 54985037
chr17 55801435 55801443 VSX2 JASPAR yes 54985038
chr17 55801435 55801445 MEF2A JASPAR yes 21260530
chr17 55801435 55801445 MEF2A JASPAR yes 54985039
chr17 55801472 55801478 YY1 JASPAR yes 21260531
chr17 55801472 55801478 YY1 JASPAR yes 54985040
chr17 55801478 55801499 ZNF263 JASPAR yes 21260532
chr17 55801478 55801499 ZNF263 JASPAR yes 54985041
chr17 55801489 55801510 IRF1 JASPAR yes 21260533
chr17 55801489 55801510 IRF1 JASPAR yes 54985042
chr17 55801491 55801502 FLI1 JASPAR yes 21260534
chr17 55801491 55801502 FLI1 JASPAR yes 54985043
chr17 55801491 55801506 IRF9 JASPAR yes 21260535
chr17 55801491 55801506 IRF9 JASPAR yes 54985044
chr17 55801492 55801497 ETS2 TRANSFAC yes 21260536
chr17 55801492 55801497 ETS2 TRANSFAC yes 54985045
chr17 55801492 55801500 FEV JASPAR yes 21260537
chr17 55801492 55801500 FEV JASPAR yes 54985046
chr17 55801493 55801507 STAT1 JASPAR yes 21260538
chr17 55801493 55801507 STAT1 JASPAR yes 54985047
chr17 55801493 55801508 STAT2 JASPAR yes 21260539
chr17 55801493 55801508 STAT2 JASPAR yes 54985048
chr17 55801494 55801506 IRF1 JASPAR yes 21260540
chr17 55801494 55801506 IRF1 JASPAR yes 54985049
chr17 55801514 55801525 FOSL2 JASPAR yes 21260541
chr17 55801514 55801525 FOSL2 JASPAR yes 54985050
chr17 55801515 55801521 YY1 JASPAR yes 21260542
chr17 55801515 55801521 YY1 JASPAR yes 54985051
chr17 55801515 55801526 NFE2 JASPAR yes 21260543
chr17 55801515 55801526 NFE2 JASPAR yes 54985052
chr17 55801526 55801530 NFE TRANSFAC yes 21260544
chr17 55801526 55801530 NFE TRANSFAC yes 54985053
chr17 55801526 55801539 SMAD2 JASPAR yes 21260545
chr17 55801526 55801539 SMAD2 JASPAR yes 54985054
chr17 55801530 55801534 NFE TRANSFAC yes 21260546
chr17 55801530 55801534 NFE TRANSFAC yes 54985055
chr17 55801534 55801542 FEV JASPAR yes 21260547
chr17 55801534 55801542 FEV JASPAR yes 54985056
SNP sites on vista25250[chr17:55801190-55801558]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55801352 rs150325299 A G no 4952680
chr17 55801488 rs137860056 C T
ZNF263
4952681
chr17 55801510 rs530075829 G A
IRF1
4952682
chr17 55801517 rs548543226 A G
FOSL2 NFE2 YY1
4952683
chr17 55801529 rs16942245 G C
NFE SMAD2
4952684
Genes possibly regulated by vista25250[chr17:55801190-55801558]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55821842 55822673 - AC007431.1 ENSG00000166329.2 55822673 0.96 0.0 16073 78885
Expression level of Genes
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miRNAs possibly regulated by vista25250[chr17:55801190-55801558]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results