EnhancerDB
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  3. vista25257[chr17:55952714-55953105]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25257[chr17:55952714-55953105]
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Tissue distribution of vista25257
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Transcription factor that possibly regulate vista25257[chr17:55952714-55953105]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55952714 55953149 EP300 UCSC Txn Factor no Conserved 108274509
chr17 55952717 55953146 TCF12 UCSC Txn Factor no Conserved 108274511
chr17 55952777 55953389 CTCF UCSC Txn Factor no Conserved 108274532
chr17 55952863 55953124 RAD21 UCSC Txn Factor no Conserved 108274547
chr17 55952724 55952743 CTCF JASPAR yes 21260867
chr17 55952724 55952743 CTCF JASPAR yes 54993617
chr17 55952724 55952745 ZNF263 JASPAR yes 21260868
chr17 55952724 55952745 ZNF263 JASPAR yes 54993618
chr17 55952725 55952729 LFA1 TRANSFAC yes 21260869
chr17 55952725 55952729 LFA1 TRANSFAC yes 54993619
chr17 55952730 55952748 ESR1 JASPAR yes 21260870
chr17 55952730 55952748 ESR1 JASPAR yes 54993620
chr17 55952751 55952763 NHLH1 JASPAR yes 21260871
chr17 55952751 55952763 NHLH1 JASPAR yes 54993621
chr17 55952752 55952762 TFAP4 JASPAR yes 21260872
chr17 55952752 55952762 TFAP4 JASPAR yes 54993622
chr17 55952757 55952767 RELA JASPAR yes 21260873
chr17 55952757 55952767 RELA JASPAR yes 54993623
chr17 55952763 55952768 ETS2 TRANSFAC yes 21260874
chr17 55952763 55952768 ETS2 TRANSFAC yes 54993624
chr17 55952783 55952787 H4TF2 TRANSFAC yes 21260875
chr17 55952783 55952787 H4TF2 TRANSFAC yes 54993625
chr17 55952790 55952795 ETS2 TRANSFAC yes 21260876
chr17 55952790 55952795 ETS2 TRANSFAC yes 54993626
chr17 55952790 55952798 EHF JASPAR yes 21260877
chr17 55952790 55952798 EHF JASPAR yes 54993627
chr17 55952803 55952811 SP1 TRANSFAC yes 21260878
chr17 55952803 55952811 SP1 TRANSFAC yes 54993628
chr17 55952803 55952813 SP1 JASPAR yes 21260879
chr17 55952803 55952813 SP1 JASPAR yes 54993629
chr17 55952809 55952815 SP1 TRANSFAC yes 21260880
chr17 55952809 55952815 SP1 TRANSFAC yes 54993630
chr17 55952809 55952823 PLAG1 JASPAR yes 21260881
chr17 55952809 55952823 PLAG1 JASPAR yes 54993631
chr17 55952815 55952834 REST JASPAR yes 21260882
chr17 55952815 55952834 REST JASPAR yes 54993632
chr17 55952838 55952853 JUND JASPAR yes 21260883
chr17 55952838 55952853 JUND JASPAR yes 54993633
chr17 55952839 55952852 JUN JASPAR yes 21260884
chr17 55952839 55952852 JUN JASPAR yes 54993634
chr17 55952843 55952851 CREB1 JASPAR yes 21260885
chr17 55952843 55952851 CREB1 JASPAR yes 54993635
chr17 55952846 55952850 ESR1 TRANSFAC yes 21260886
chr17 55952846 55952850 ESR1 TRANSFAC yes 54993636
chr17 55952847 55952857 SREBF1 JASPAR yes 21260887
chr17 55952847 55952857 SREBF2 JASPAR yes 21260888
chr17 55952847 55952857 SREBF1 JASPAR yes 54993637
chr17 55952847 55952857 SREBF2 JASPAR yes 54993638
chr17 55952853 55952865 NHLH1 JASPAR yes 21260889
chr17 55952853 55952865 NHLH1 JASPAR yes 54993639
chr17 55952853 55952866 ZBTB18 JASPAR yes 21260890
chr17 55952853 55952866 ZBTB18 JASPAR yes 54993640
chr17 55952854 55952864 NHLH1 JASPAR yes 21260891
chr17 55952854 55952864 NHLH1 JASPAR yes 54993641
chr17 55952871 55952875 LFA1 TRANSFAC yes 21260892
chr17 55952871 55952875 LFA1 TRANSFAC yes 54993642
chr17 55952879 55952898 RFX2 JASPAR yes 21260893
chr17 55952879 55952898 RFX2 JASPAR yes 54993643
chr17 55952895 55952907 GLI2 JASPAR yes 21260894
chr17 55952895 55952907 GLI2 JASPAR yes 54993644
chr17 55952896 55952906 RUNX3 JASPAR yes 21260895
chr17 55952896 55952906 RUNX3 JASPAR yes 54993645
chr17 55952904 55952910 ETS1 JASPAR yes 21260896
chr17 55952904 55952910 ETS1 JASPAR yes 54993646
chr17 55952908 55952913 ETS2 TRANSFAC yes 21260897
chr17 55952908 55952913 ETS2 TRANSFAC yes 54993647
chr17 55952908 55952918 TEAD1 JASPAR yes 21260898
chr17 55952908 55952918 TEAD4 JASPAR yes 21260899
chr17 55952908 55952918 TEAD1 JASPAR yes 54993648
chr17 55952908 55952918 TEAD4 JASPAR yes 54993649
chr17 55952909 55952917 TEAD3 JASPAR yes 21260900
chr17 55952909 55952917 TEAD3 JASPAR yes 54993650
chr17 55952918 55952924 HiNF-A TRANSFAC yes 21260901
chr17 55952918 55952924 HiNF-A TRANSFAC yes 54993651
chr17 55952933 55952948 FOXP1 JASPAR yes 21260902
chr17 55952933 55952948 FOXP1 JASPAR yes 54993652
chr17 55952935 55952945 HOXB13 JASPAR yes 21260903
chr17 55952935 55952945 HOXB13 JASPAR yes 54993653
chr17 55952935 55952950 FOXP1 JASPAR yes 21260904
chr17 55952935 55952950 FOXP1 JASPAR yes 54993654
chr17 55952936 55952951 FOXP1 JASPAR yes 21260905
chr17 55952936 55952951 FOXP1 JASPAR yes 54993655
chr17 55952936 55952957 IRF1 JASPAR yes 21260906
chr17 55952936 55952957 IRF1 JASPAR yes 54993656
chr17 55952937 55952952 FOXP1 JASPAR yes 21260907
chr17 55952937 55952952 FOXP1 JASPAR yes 54993657
chr17 55952939 55952945 TBP TRANSFAC yes 21260908
chr17 55952939 55952945 TBP TRANSFAC yes 54993658
chr17 55952940 55952955 STAT2 JASPAR yes 21260909
chr17 55952940 55952955 STAT2 JASPAR yes 54993659
chr17 55952941 55952959 NR3C1 JASPAR yes 21260910
chr17 55952941 55952959 NR3C1 JASPAR yes 54993660
chr17 55952969 55952972 MYB TRANSFAC yes 21260911
chr17 55952969 55952972 MYB TRANSFAC yes 54993661
chr17 55952970 55952980 NFATC3 JASPAR yes 21260912
chr17 55952970 55952980 NFATC3 JASPAR yes 54993662
chr17 55952972 55952978 ETS1 JASPAR yes 21260913
chr17 55952972 55952978 ETS1 JASPAR yes 54993663
chr17 55952977 55952992 ZIC4 JASPAR yes 21260914
chr17 55952977 55952992 ZIC4 JASPAR yes 54993664
chr17 55952978 55952992 ZIC1 JASPAR yes 21260915
chr17 55952978 55952992 ZIC1 JASPAR yes 54993665
chr17 55952984 55952989 SP1 TRANSFAC yes 21260916
chr17 55952984 55952989 SP1 TRANSFAC yes 54993666
chr17 55953002 55953006 H4TF2 TRANSFAC yes 21260917
chr17 55953002 55953006 H4TF2 TRANSFAC yes 54993667
chr17 55953002 55953016 EBF1 JASPAR yes 21260918
chr17 55953002 55953016 EBF1 JASPAR yes 54993668
chr17 55953022 55953026 NFE TRANSFAC yes 21260919
chr17 55953022 55953026 NFE TRANSFAC yes 54993669
chr17 55953038 55953049 E2F6 JASPAR yes 21260920
chr17 55953038 55953049 E2F6 JASPAR yes 54993670
chr17 55953040 55953061 ZNF263 JASPAR yes 21260921
chr17 55953040 55953061 ZNF263 JASPAR yes 54993671
chr17 55953041 55953062 ZNF263 JASPAR yes 21260922
chr17 55953041 55953062 ZNF263 JASPAR yes 54993672
chr17 55953042 55953047 ETS2 TRANSFAC yes 21260923
chr17 55953042 55953047 ETS2 TRANSFAC yes 54993673
chr17 55953044 55953065 ZNF263 JASPAR yes 21260924
chr17 55953044 55953065 ZNF263 JASPAR yes 54993674
chr17 55953056 55953065 SP1 TRANSFAC yes 21260925
chr17 55953056 55953065 SP1 TRANSFAC yes 54993675
chr17 55953056 55953066 SP1 JASPAR yes 21260926
chr17 55953056 55953066 SP1 JASPAR yes 54993676
chr17 55953056 55953077 ZNF263 JASPAR yes 21260927
chr17 55953056 55953077 ZNF263 JASPAR yes 54993677
chr17 55953057 55953066 SP1 TRANSFAC yes 21260928
chr17 55953057 55953066 SP1 TRANSFAC yes 54993678
chr17 55953058 55953064 MAZ TRANSFAC yes 21260929
chr17 55953058 55953064 MAZ TRANSFAC yes 54993679
chr17 55953059 55953069 MZF1 JASPAR yes 21260930
chr17 55953059 55953069 MZF1 JASPAR yes 54993680
chr17 55953059 55953080 ZNF263 JASPAR yes 21260931
chr17 55953059 55953080 ZNF263 JASPAR yes 54993681
chr17 55953062 55953072 SP1 JASPAR yes 21260932
chr17 55953062 55953072 SP1 JASPAR yes 54993682
chr17 55953063 55953068 ETS2 TRANSFAC yes 21260933
chr17 55953063 55953068 ETS2 TRANSFAC yes 54993683
chr17 55953065 55953086 ZNF263 JASPAR yes 21260934
chr17 55953065 55953086 ZNF263 JASPAR yes 54993684
chr17 55953067 55953078 E2F6 JASPAR yes 21260935
chr17 55953067 55953078 E2F6 JASPAR yes 54993685
chr17 55953068 55953089 ZNF263 JASPAR yes 21260936
chr17 55953068 55953089 ZNF263 JASPAR yes 54993686
chr17 55953069 55953090 ZNF263 JASPAR yes 21260937
chr17 55953069 55953090 ZNF263 JASPAR yes 54993687
chr17 55953080 55953085 TFAP2A TRANSFAC yes 21260938
chr17 55953080 55953085 TFAP2A TRANSFAC yes 54993688
chr17 55953080 55953086 MZF1 JASPAR yes 21260939
chr17 55953080 55953086 MZF1 JASPAR yes 54993689
chr17 55953085 55953096 NFKB1 JASPAR yes 21260940
chr17 55953085 55953096 NFKB1 JASPAR yes 54993690
chr17 55953087 55953092 H4TF1 TRANSFAC yes 21260941
chr17 55953087 55953092 H4TF1 TRANSFAC yes 54993691
SNP sites on vista25257[chr17:55952714-55953105]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55952728 rs115641897 G A
CTCF EP300 LFA1 TCF12 ZNF263
4953853
chr17 55952772 rs545392780 TG T
EP300 TCF12
4953854
chr17 55952776 rs73992333 A C,G
EP300 TCF12
4953855
chr17 55952817 rs11653349 C T
CTCF EP300 PLAG1 REST TCF12
4953856
chr17 55953045 rs115692670 G A
CTCF E2F6 EP300 ETS2 RAD21 TCF12 ZNF263
4953857
chr17 55953058 rs112170976 G C
CTCF EP300 MAZ RAD21 SP1 TCF12 ZNF263
4953858
Genes possibly regulated by vista25257[chr17:55952714-55953105]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 74703
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 20421
Expression level of Genes
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miRNAs possibly regulated by vista25257[chr17:55952714-55953105]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results