EnhancerDB
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  3. vista2526[chr1:94532879-94533090]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2526[chr1:94532879-94533090]
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Tissue distribution of vista2526
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Transcription factor that possibly regulate vista2526[chr1:94532879-94533090]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 94532877 94533008 FOS UCSC Txn Factor no Conserved 107815455
chr1 94532890 94532902 NHLH1 JASPAR yes 30851433
chr1 94532890 94532902 NHLH1 JASPAR yes 118331865
chr1 94532891 94532901 NHLH1 JASPAR yes 30851434
chr1 94532891 94532901 TFAP4 JASPAR yes 30851435
chr1 94532891 94532901 NHLH1 JASPAR yes 118331866
chr1 94532891 94532901 TFAP4 JASPAR yes 118331867
chr1 94532912 94532923 NRL JASPAR yes 30851436
chr1 94532912 94532923 NRL JASPAR yes 118331868
chr1 94532919 94532931 PKNOX1 JASPAR yes 30851437
chr1 94532919 94532931 PKNOX2 JASPAR yes 30851438
chr1 94532919 94532931 TGIF1 JASPAR yes 30851439
chr1 94532919 94532931 TGIF2 JASPAR yes 30851440
chr1 94532919 94532931 PKNOX1 JASPAR yes 118331869
chr1 94532919 94532931 PKNOX2 JASPAR yes 118331870
chr1 94532919 94532931 TGIF1 JASPAR yes 118331871
chr1 94532919 94532931 TGIF2 JASPAR yes 118331872
chr1 94532926 94532938 CREB1 JASPAR yes 30851441
chr1 94532926 94532938 CREB1 JASPAR yes 118331873
chr1 94532928 94532942 CREB3L1 JASPAR yes 30851442
chr1 94532928 94532942 CREB3L1 JASPAR yes 118331874
chr1 94532929 94532943 XBP1 JASPAR yes 30851443
chr1 94532929 94532943 XBP1 JASPAR yes 118331875
chr1 94532931 94532936 ATF1 TRANSFAC yes 30851444
chr1 94532931 94532936 ATF1 TRANSFAC yes 118331876
chr1 94532962 94532972 TFAP4 JASPAR yes 30851445
chr1 94532962 94532972 TFAP4 JASPAR yes 118331877
chr1 94532962 94532976 JUN JASPAR yes 30851446
chr1 94532962 94532976 JUN JASPAR yes 118331878
chr1 94532966 94532977 FOS JASPAR yes 30851447
chr1 94532966 94532977 JUND JASPAR yes 30851448
chr1 94532966 94532977 FOS JASPAR yes 118331879
chr1 94532966 94532977 JUND JASPAR yes 118331880
chr1 94532968 94532988 TP53 JASPAR yes 30851449
chr1 94532968 94532988 TP53 JASPAR yes 118331881
chr1 94532994 94533004 MZF1 JASPAR yes 30851450
chr1 94532994 94533004 MZF1 JASPAR yes 118331882
chr1 94533018 94533032 EBF1 JASPAR yes 30851451
chr1 94533018 94533032 EBF1 JASPAR yes 118331883
chr1 94533020 94533031 EBF1 JASPAR yes 30851452
chr1 94533020 94533031 EBF1 JASPAR yes 118331884
chr1 94533021 94533033 E2F8 JASPAR yes 30851453
chr1 94533021 94533033 E2F8 JASPAR yes 118331885
chr1 94533027 94533041 STAT1 JASPAR yes 30851454
chr1 94533027 94533041 STAT1 JASPAR yes 118331886
chr1 94533027 94533042 STAT2 JASPAR yes 30851455
chr1 94533027 94533042 STAT2 JASPAR yes 118331887
chr1 94533047 94533060 HSF2 JASPAR yes 30851456
chr1 94533047 94533060 HSF2 JASPAR yes 118331888
chr1 94533059 94533063 YY1 TRANSFAC yes 30851457
chr1 94533059 94533063 YY1 TRANSFAC yes 118331889
chr1 94533076 94533090 RORA JASPAR yes 30851458
chr1 94533076 94533090 RORA JASPAR yes 118331890
chr1 94533077 94533087 RORA JASPAR yes 30851459
chr1 94533077 94533087 RORA JASPAR yes 118331891
chr1 94533082 94533086 YY1 TRANSFAC yes 30851460
chr1 94533082 94533086 YY1 TRANSFAC yes 118331892
chr1 94533086 94533092 TCF1 TRANSFAC yes 30851461
chr1 94533086 94533092 TCF1 TRANSFAC yes 118331893
SNP sites on vista2526[chr1:94532879-94533090]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 94532883 rs549022340 A G
FOS
492277
chr1 94532937 rs143998600 T C
CREB1 CREB3L1 FOS XBP1
492278
chr1 94533014 rs1931575 T C no 492279
chr1 94533027 rs74102102 G C
E2F8 EBF1 STAT1 STAT2
492280
chr1 94533042 rs2893265 A C,G
STAT2
492281
Genes possibly regulated by vista2526[chr1:94532879-94533090]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 94458393 94586688 - ABCA4 ENSG00000198691.7 94586688 0.98 0.98 910 46402
Expression level of Genes
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miRNAs possibly regulated by vista2526[chr1:94532879-94533090]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results