EnhancerDB
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  3. vista25260[chr17:55975415-55975589]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25260[chr17:55975415-55975589]
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Tissue distribution of vista25260
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Transcription factor that possibly regulate vista25260[chr17:55975415-55975589]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55975348 55975813 CTCF UCSC Txn Factor no Conserved 108274678
chr17 55975424 55975439 TFAP2C JASPAR yes 21261013
chr17 55975424 55975439 TFAP2C JASPAR yes 54996584
chr17 55975426 55975439 TFAP2A JASPAR yes 21261014
chr17 55975426 55975439 TFAP2B JASPAR yes 21261015
chr17 55975426 55975439 TFAP2C JASPAR yes 21261016
chr17 55975426 55975439 TFAP2A JASPAR yes 54996585
chr17 55975426 55975439 TFAP2B JASPAR yes 54996586
chr17 55975426 55975439 TFAP2C JASPAR yes 54996587
chr17 55975427 55975438 EBF1 JASPAR yes 21261017
chr17 55975427 55975438 EBF1 JASPAR yes 54996588
chr17 55975470 55975474 H1TF2 TRANSFAC yes 21261018
chr17 55975470 55975474 NFE TRANSFAC yes 21261019
chr17 55975470 55975474 SRF TRANSFAC yes 21261020
chr17 55975470 55975474 H1TF2 TRANSFAC yes 54996589
chr17 55975470 55975474 NFE TRANSFAC yes 54996590
chr17 55975470 55975474 SRF TRANSFAC yes 54996591
chr17 55975475 55975483 EHF JASPAR yes 21261021
chr17 55975475 55975483 EHF JASPAR yes 54996592
chr17 55975488 55975498 BARHL2 JASPAR yes 21261022
chr17 55975488 55975498 BARHL2 JASPAR yes 54996593
chr17 55975490 55975494 YY1 TRANSFAC yes 21261023
chr17 55975490 55975494 YY1 TRANSFAC yes 54996594
chr17 55975507 55975525 ESR1 JASPAR yes 21261024
chr17 55975507 55975525 ESR1 JASPAR yes 54996595
chr17 55975516 55975530 ZIC1 JASPAR yes 21261025
chr17 55975516 55975530 ZIC1 JASPAR yes 54996596
chr17 55975516 55975531 ZIC4 JASPAR yes 21261026
chr17 55975516 55975531 ZIC4 JASPAR yes 54996597
chr17 55975544 55975548 ESR1 TRANSFAC yes 21261027
chr17 55975544 55975548 ESR1 TRANSFAC yes 54996598
chr17 55975552 55975561 ZEB1 JASPAR yes 21261028
chr17 55975552 55975561 ZEB1 JASPAR yes 54996599
chr17 55975555 55975560 USF2 TRANSFAC yes 21261029
chr17 55975555 55975560 USF2 TRANSFAC yes 54996600
chr17 55975556 55975575 CTCF JASPAR yes 21261030
chr17 55975556 55975575 CTCF JASPAR yes 54996601
chr17 55975559 55975573 ZIC1 JASPAR yes 21261031
chr17 55975559 55975573 ZIC1 JASPAR yes 54996602
chr17 55975559 55975574 ZIC3 JASPAR yes 21261032
chr17 55975559 55975574 ZIC4 JASPAR yes 21261033
chr17 55975559 55975574 ZIC3 JASPAR yes 54996603
chr17 55975559 55975574 ZIC4 JASPAR yes 54996604
chr17 55975569 55975574 TFAP2A TRANSFAC yes 21261034
chr17 55975569 55975574 TFAP2A TRANSFAC yes 54996605
chr17 55975569 55975575 MZF1 JASPAR yes 21261035
chr17 55975569 55975575 MZF1 JASPAR yes 54996606
chr17 55975569 55975590 ZNF263 JASPAR yes 21261036
chr17 55975569 55975590 ZNF263 JASPAR yes 54996607
chr17 55975573 55975594 ZNF263 JASPAR yes 21261037
chr17 55975573 55975594 ZNF263 JASPAR yes 54996608
chr17 55975579 55975584 ETS2 TRANSFAC yes 21261038
chr17 55975579 55975584 ETS2 TRANSFAC yes 54996609
chr17 55975582 55975587 ETS2 TRANSFAC yes 21261039
chr17 55975582 55975587 ETS2 TRANSFAC yes 54996610
SNP sites on vista25260[chr17:55975415-55975589]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista25260[chr17:55975415-55975589]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 52002
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 42905
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 9969
Expression level of Genes
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miRNAs possibly regulated by vista25260[chr17:55975415-55975589]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results