EnhancerDB
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  3. vista25263[chr17:55978714-55978990]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25263[chr17:55978714-55978990]
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Tissue distribution of vista25263
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Transcription factor that possibly regulate vista25263[chr17:55978714-55978990]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 55978608 55979078 GATA3 UCSC Txn Factor no Conserved 108274717
chr17 55978747 55979032 FOXA1 UCSC Txn Factor no Conserved 108274720
chr17 55978780 55979021 EP300 UCSC Txn Factor no Conserved 108274722
chr17 55978793 55979009 FOXA2 UCSC Txn Factor no Conserved 108274723
chr17 55978820 55979204 POLR2A UCSC Txn Factor no Conserved 108274725
chr17 55978726 55978741 AR JASPAR yes 21261123
chr17 55978726 55978741 AR JASPAR yes 54996962
chr17 55978739 55978743 NFE TRANSFAC yes 21261124
chr17 55978739 55978743 NFE TRANSFAC yes 54996963
chr17 55978754 55978759 ETS2 TRANSFAC yes 21261125
chr17 55978754 55978759 ETS2 TRANSFAC yes 54996964
chr17 55978797 55978807 NEUROG2 JASPAR yes 21261126
chr17 55978797 55978807 NEUROG2 JASPAR yes 54996965
chr17 55978797 55978809 TAL1 JASPAR yes 21261127
chr17 55978797 55978809 TAL1 JASPAR yes 54996966
chr17 55978801 55978807 YY1 JASPAR yes 21261128
chr17 55978801 55978807 YY1 JASPAR yes 54996967
chr17 55978827 55978837 MZF1 JASPAR yes 21261129
chr17 55978827 55978837 MZF1 JASPAR yes 54996968
chr17 55978830 55978836 SP1 TRANSFAC yes 21261130
chr17 55978830 55978836 SP1 TRANSFAC yes 54996969
chr17 55978830 55978840 SP1 JASPAR yes 21261131
chr17 55978830 55978840 SP1 JASPAR yes 54996970
chr17 55978840 55978852 FOXI1 JASPAR yes 21261132
chr17 55978840 55978852 FOXI1 JASPAR yes 54996971
chr17 55978841 55978853 FOXC2 JASPAR yes 21261133
chr17 55978841 55978853 FOXC2 JASPAR yes 54996972
chr17 55978841 55978855 ONECUT2 JASPAR yes 21261134
chr17 55978841 55978855 ONECUT3 JASPAR yes 21261135
chr17 55978841 55978855 ONECUT2 JASPAR yes 54996973
chr17 55978841 55978855 ONECUT3 JASPAR yes 54996974
chr17 55978842 55978853 FOXB1 JASPAR yes 21261136
chr17 55978842 55978853 FOXC1 JASPAR yes 21261137
chr17 55978842 55978853 FOXB1 JASPAR yes 54996975
chr17 55978842 55978853 FOXC1 JASPAR yes 54996976
chr17 55978842 55978856 IRF7 JASPAR yes 21261138
chr17 55978842 55978856 IRF7 JASPAR yes 54996977
chr17 55978843 55978847 YY1 TRANSFAC yes 21261139
chr17 55978843 55978847 YY1 TRANSFAC yes 54996978
chr17 55978847 55978851 YY1 TRANSFAC yes 21261140
chr17 55978847 55978851 YY1 TRANSFAC yes 54996979
chr17 55978873 55978891 NFYA JASPAR yes 21261141
chr17 55978873 55978891 NFYA JASPAR yes 54996980
chr17 55978886 55978901 FOXP1 JASPAR yes 21261142
chr17 55978886 55978901 FOXP1 JASPAR yes 54996981
chr17 55978887 55978898 FOXA1 JASPAR yes 21261143
chr17 55978887 55978898 FOXA1 JASPAR yes 54996982
chr17 55978887 55978902 FOXA1 JASPAR yes 21261144
chr17 55978887 55978902 FOXA1 JASPAR yes 54996983
chr17 55978889 55978900 FOXP2 JASPAR yes 21261145
chr17 55978889 55978900 FOXP2 JASPAR yes 54996984
chr17 55978890 55978898 FOXO3 JASPAR yes 21261146
chr17 55978890 55978898 FOXO3 JASPAR yes 54996985
chr17 55978891 55978898 FOXD2 JASPAR yes 21261147
chr17 55978891 55978898 FOXI1 JASPAR yes 21261148
chr17 55978891 55978898 FOXL1 JASPAR yes 21261149
chr17 55978891 55978898 FOXO4 JASPAR yes 21261150
chr17 55978891 55978898 FOXO6 JASPAR yes 21261151
chr17 55978891 55978898 FOXP3 JASPAR yes 21261152
chr17 55978891 55978898 FOXD2 JASPAR yes 54996986
chr17 55978891 55978898 FOXI1 JASPAR yes 54996987
chr17 55978891 55978898 FOXL1 JASPAR yes 54996988
chr17 55978891 55978898 FOXO4 JASPAR yes 54996989
chr17 55978891 55978898 FOXO6 JASPAR yes 54996990
chr17 55978891 55978898 FOXP3 JASPAR yes 54996991
chr17 55978891 55978899 FOXD1 JASPAR yes 21261153
chr17 55978891 55978899 FOXG1 JASPAR yes 21261154
chr17 55978891 55978899 FOXO3 JASPAR yes 21261155
chr17 55978891 55978899 FOXD1 JASPAR yes 54996992
chr17 55978891 55978899 FOXG1 JASPAR yes 54996993
chr17 55978891 55978899 FOXO3 JASPAR yes 54996994
chr17 55978892 55978913 MAFG JASPAR yes 21261156
chr17 55978892 55978913 MAFG JASPAR yes 54996995
chr17 55978897 55978905 SP1 TRANSFAC yes 21261157
chr17 55978897 55978905 SP1 TRANSFAC yes 54996996
chr17 55978906 55978915 ZEB1 JASPAR yes 21261158
chr17 55978906 55978915 ZEB1 JASPAR yes 54996997
chr17 55978907 55978917 ID4 JASPAR yes 21261159
chr17 55978907 55978917 TCF3 JASPAR yes 21261160
chr17 55978907 55978917 TCF4 JASPAR yes 21261161
chr17 55978907 55978917 ID4 JASPAR yes 54996998
chr17 55978907 55978917 TCF3 JASPAR yes 54996999
chr17 55978907 55978917 TCF4 JASPAR yes 54997000
chr17 55978909 55978914 USF2 TRANSFAC yes 21261162
chr17 55978909 55978914 USF2 TRANSFAC yes 54997001
chr17 55978936 55978942 SOX10 JASPAR yes 21261163
chr17 55978936 55978942 SOX10 JASPAR yes 54997002
chr17 55978946 55978952 NFIC JASPAR yes 21261164
chr17 55978946 55978952 NFIC JASPAR yes 54997003
chr17 55978946 55978957 NFE2L2 JASPAR yes 21261165
chr17 55978946 55978957 NFE2L2 JASPAR yes 54997004
chr17 55978952 55978962 SREBF1 JASPAR yes 21261166
chr17 55978952 55978962 SREBF2 JASPAR yes 21261167
chr17 55978952 55978962 SREBF1 JASPAR yes 54997005
chr17 55978952 55978962 SREBF2 JASPAR yes 54997006
chr17 55978958 55978978 TP63 JASPAR yes 21261168
chr17 55978958 55978978 TP63 JASPAR yes 54997007
chr17 55978959 55978977 TP53 JASPAR yes 21261169
chr17 55978959 55978977 TP63 JASPAR yes 21261170
chr17 55978959 55978977 TP73 JASPAR yes 21261171
chr17 55978959 55978977 TP53 JASPAR yes 54997008
chr17 55978959 55978977 TP63 JASPAR yes 54997009
chr17 55978959 55978977 TP73 JASPAR yes 54997010
chr17 55978960 55978975 TP53 JASPAR yes 21261172
chr17 55978960 55978975 TP53 JASPAR yes 54997011
chr17 55978960 55978980 TP53 JASPAR yes 21261173
chr17 55978960 55978980 TP53 JASPAR yes 54997012
chr17 55978961 55978976 TP53 JASPAR yes 21261174
chr17 55978961 55978976 TP53 JASPAR yes 54997013
chr17 55978983 55978987 NFE TRANSFAC yes 21261175
chr17 55978983 55978987 NFE TRANSFAC yes 54997014
chr17 55978983 55978996 SMAD2 JASPAR yes 21261176
chr17 55978983 55978996 SMAD2 JASPAR yes 54997015
chr17 55978987 55978991 NFE TRANSFAC yes 21261177
chr17 55978987 55978991 NFE TRANSFAC yes 54997016
SNP sites on vista25263[chr17:55978714-55978990]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 55978891 rs114964615 T C
EP300 FOXA1 FOXA2 FOXD1 FOXD2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP1 FOXP2 FOXP3 GATA3 NFYA POLR2A
4954186
Genes possibly regulated by vista25263[chr17:55978714-55978990]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 48703
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 46306
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 13370
Expression level of Genes
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miRNAs possibly regulated by vista25263[chr17:55978714-55978990]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results