EnhancerDB
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  3. vista2527[chr1:94535371-94535770]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2527[chr1:94535371-94535770]
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Tissue distribution of vista2527
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Transcription factor that possibly regulate vista2527[chr1:94535371-94535770]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 94533538 94535679 POLR2A UCSC Txn Factor no Conserved 107815456
chr1 94534902 94535546 TCF7L2 UCSC Txn Factor no Conserved 107815458
chr1 94535394 94535399 ETS2 TRANSFAC yes 30851774
chr1 94535394 94535399 ETS2 TRANSFAC yes 118331894
chr1 94535398 94535404 HiNF-A TRANSFAC yes 30851775
chr1 94535398 94535404 HiNF-A TRANSFAC yes 118331895
chr1 94535399 94535409 TFE3 JASPAR yes 30851776
chr1 94535399 94535409 TFEB JASPAR yes 30851777
chr1 94535399 94535409 TFEC JASPAR yes 30851778
chr1 94535399 94535409 TFE3 JASPAR yes 118331896
chr1 94535399 94535409 TFEB JASPAR yes 118331897
chr1 94535399 94535409 TFEC JASPAR yes 118331898
chr1 94535409 94535424 FOXP1 JASPAR yes 30851779
chr1 94535409 94535424 FOXP1 JASPAR yes 118331899
chr1 94535412 94535419 NFATC2 JASPAR yes 30851780
chr1 94535412 94535419 NFATC2 JASPAR yes 118331900
chr1 94535412 94535423 FOXP2 JASPAR yes 30851781
chr1 94535412 94535423 FOXP2 JASPAR yes 118331901
chr1 94535413 94535421 FOXO3 JASPAR yes 30851782
chr1 94535413 94535421 FOXO3 JASPAR yes 118331902
chr1 94535414 94535423 SRY JASPAR yes 30851783
chr1 94535414 94535423 SRY JASPAR yes 118331903
chr1 94535418 94535424 SOX10 JASPAR yes 30851784
chr1 94535418 94535424 SOX10 JASPAR yes 118331904
chr1 94535423 94535436 ELF1 JASPAR yes 30851785
chr1 94535423 94535436 ELF1 JASPAR yes 118331905
chr1 94535425 94535436 ETV2 JASPAR yes 30851786
chr1 94535425 94535436 ETV2 JASPAR yes 118331906
chr1 94535426 94535436 ERF JASPAR yes 30851787
chr1 94535426 94535436 ERG JASPAR yes 30851788
chr1 94535426 94535436 ETS1 JASPAR yes 30851789
chr1 94535426 94535436 FEV JASPAR yes 30851790
chr1 94535426 94535436 FLI1 JASPAR yes 30851791
chr1 94535426 94535436 ERF JASPAR yes 118331907
chr1 94535426 94535436 ERG JASPAR yes 118331908
chr1 94535426 94535436 ETS1 JASPAR yes 118331909
chr1 94535426 94535436 FEV JASPAR yes 118331910
chr1 94535426 94535436 FLI1 JASPAR yes 118331911
chr1 94535426 94535437 ELK4 JASPAR yes 30851792
chr1 94535426 94535437 FLI1 JASPAR yes 30851793
chr1 94535426 94535437 ELK4 JASPAR yes 118331912
chr1 94535426 94535437 FLI1 JASPAR yes 118331913
chr1 94535427 94535435 FEV JASPAR yes 30851794
chr1 94535427 94535435 FEV JASPAR yes 118331914
chr1 94535436 94535446 FIGLA JASPAR yes 30851795
chr1 94535436 94535446 MSC JASPAR yes 30851796
chr1 94535436 94535446 MYF6 JASPAR yes 30851797
chr1 94535436 94535446 NHLH1 JASPAR yes 30851798
chr1 94535436 94535446 TFAP4 JASPAR yes 30851799
chr1 94535436 94535446 FIGLA JASPAR yes 118331915
chr1 94535436 94535446 MSC JASPAR yes 118331916
chr1 94535436 94535446 MYF6 JASPAR yes 118331917
chr1 94535436 94535446 NHLH1 JASPAR yes 118331918
chr1 94535436 94535446 TFAP4 JASPAR yes 118331919
chr1 94535445 94535451 TBP TRANSFAC yes 30851800
chr1 94535445 94535451 TBP TRANSFAC yes 118331920
chr1 94535451 94535464 SMAD2 JASPAR yes 30851801
chr1 94535451 94535464 SMAD2 JASPAR yes 118331921
chr1 94535455 94535459 NFE TRANSFAC yes 30851802
chr1 94535455 94535459 NFE TRANSFAC yes 118331922
chr1 94535461 94535475 FOXF2 JASPAR yes 30851803
chr1 94535461 94535475 FOXF2 JASPAR yes 118331923
chr1 94535461 94535476 FOXP1 JASPAR yes 30851804
chr1 94535461 94535476 FOXP1 JASPAR yes 118331924
chr1 94535462 94535473 FOXA1 JASPAR yes 30851805
chr1 94535462 94535473 FOXH1 JASPAR yes 30851806
chr1 94535462 94535473 FOXA1 JASPAR yes 118331925
chr1 94535462 94535473 FOXH1 JASPAR yes 118331926
chr1 94535462 94535477 FOXA1 JASPAR yes 30851807
chr1 94535462 94535477 FOXA1 JASPAR yes 118331927
chr1 94535463 94535474 FOXB1 JASPAR yes 30851808
chr1 94535463 94535474 FOXC1 JASPAR yes 30851809
chr1 94535463 94535474 FOXB1 JASPAR yes 118331928
chr1 94535463 94535474 FOXC1 JASPAR yes 118331929
chr1 94535463 94535475 FOXC2 JASPAR yes 30851810
chr1 94535463 94535475 FOXC2 JASPAR yes 118331930
chr1 94535464 94535475 FOXP2 JASPAR yes 30851811
chr1 94535464 94535475 FOXP2 JASPAR yes 118331931
chr1 94535464 94535476 FOXI1 JASPAR yes 30851812
chr1 94535464 94535476 FOXI1 JASPAR yes 118331932
chr1 94535466 94535474 FOXG1 JASPAR yes 30851813
chr1 94535466 94535474 FOXO3 JASPAR yes 30851814
chr1 94535466 94535474 FOXG1 JASPAR yes 118331933
chr1 94535466 94535474 FOXO3 JASPAR yes 118331934
chr1 94535478 94535499 IRF1 JASPAR yes 30851815
chr1 94535478 94535499 IRF1 JASPAR yes 118331935
chr1 94535482 94535500 IRF2 JASPAR yes 30851816
chr1 94535482 94535500 IRF2 JASPAR yes 118331936
chr1 94535483 94535495 IRF1 JASPAR yes 30851817
chr1 94535483 94535495 IRF1 JASPAR yes 118331937
chr1 94535490 94535502 FOXI1 JASPAR yes 30851818
chr1 94535490 94535502 FOXI1 JASPAR yes 118331938
chr1 94535493 94535503 HOXB13 JASPAR yes 30851819
chr1 94535493 94535503 HOXB13 JASPAR yes 118331939
chr1 94535517 94535523 SOX10 JASPAR yes 30851820
chr1 94535517 94535523 SOX10 JASPAR yes 118331940
chr1 94535533 94535537 LFA1 TRANSFAC yes 30851821
chr1 94535533 94535537 LFA1 TRANSFAC yes 118331941
chr1 94535562 94535565 MYB TRANSFAC yes 30851822
chr1 94535562 94535565 MYB TRANSFAC yes 118331942
chr1 94535568 94535572 H4TF2 TRANSFAC yes 30851823
chr1 94535568 94535572 H4TF2 TRANSFAC yes 118331943
chr1 94535573 94535583 GABPA JASPAR yes 30851824
chr1 94535573 94535583 GABPA JASPAR yes 118331944
chr1 94535574 94535579 ETS2 TRANSFAC yes 30851825
chr1 94535574 94535579 ETS2 TRANSFAC yes 118331945
chr1 94535583 94535594 USF1 JASPAR yes 30851826
chr1 94535583 94535594 USF2 JASPAR yes 30851827
chr1 94535583 94535594 USF1 JASPAR yes 118331946
chr1 94535583 94535594 USF2 JASPAR yes 118331947
chr1 94535586 94535591 USF2 TRANSFAC yes 30851828
chr1 94535586 94535591 USF2 TRANSFAC yes 118331948
chr1 94535589 94535602 SMAD2 JASPAR yes 30851829
chr1 94535589 94535602 SMAD2 JASPAR yes 118331949
chr1 94535605 94535609 LFA1 TRANSFAC yes 30851830
chr1 94535605 94535609 LFA1 TRANSFAC yes 118331950
chr1 94535606 94535616 NKX2-3 JASPAR yes 30851831
chr1 94535606 94535616 NKX2-3 JASPAR yes 118331951
chr1 94535607 94535616 NKX2-8 JASPAR yes 30851832
chr1 94535607 94535616 NKX2-8 JASPAR yes 118331952
chr1 94535630 94535643 ATF4 JASPAR yes 30851833
chr1 94535630 94535643 ATF4 JASPAR yes 118331953
chr1 94535633 94535639 JUN TRANSFAC yes 30851834
chr1 94535633 94535639 JUN TRANSFAC yes 118331954
chr1 94535652 94535656 LFA1 TRANSFAC yes 30851835
chr1 94535652 94535656 LFA1 TRANSFAC yes 118331955
chr1 94535652 94535662 MAX JASPAR yes 30851836
chr1 94535652 94535662 MAX JASPAR yes 118331956
chr1 94535676 94535688 TAL1 JASPAR yes 30851837
chr1 94535676 94535688 TAL1 JASPAR yes 118331957
chr1 94535677 94535690 ZBTB18 JASPAR yes 30851838
chr1 94535677 94535690 ZBTB18 JASPAR yes 118331958
chr1 94535685 94535695 LHX6 JASPAR yes 30851839
chr1 94535685 94535695 LHX6 JASPAR yes 118331959
chr1 94535685 94535696 FOXH1 JASPAR yes 30851840
chr1 94535685 94535696 FOXH1 JASPAR yes 118331960
chr1 94535698 94535707 HIC2 JASPAR yes 30851841
chr1 94535698 94535707 HIC2 JASPAR yes 118331961
chr1 94535701 94535705 LFA1 TRANSFAC yes 30851842
chr1 94535701 94535705 LFA1 TRANSFAC yes 118331962
chr1 94535703 94535718 NFYB JASPAR yes 30851843
chr1 94535703 94535718 NFYB JASPAR yes 118331963
chr1 94535705 94535721 NFYA JASPAR yes 30851844
chr1 94535705 94535721 NFYA JASPAR yes 118331964
chr1 94535706 94535724 NFYA JASPAR yes 30851845
chr1 94535706 94535724 NFYA JASPAR yes 118331965
chr1 94535707 94535719 PBX1 JASPAR yes 30851846
chr1 94535707 94535719 PBX1 JASPAR yes 118331966
chr1 94535710 94535714 H1TF2 TRANSFAC yes 30851847
chr1 94535710 94535714 NFE TRANSFAC yes 30851848
chr1 94535710 94535714 SRF TRANSFAC yes 30851849
chr1 94535710 94535714 H1TF2 TRANSFAC yes 118331967
chr1 94535710 94535714 NFE TRANSFAC yes 118331968
chr1 94535710 94535714 SRF TRANSFAC yes 118331969
chr1 94535713 94535723 SREBF1 JASPAR yes 30851850
chr1 94535713 94535723 SREBF2 JASPAR yes 30851851
chr1 94535713 94535723 SREBF1 JASPAR yes 118331970
chr1 94535713 94535723 SREBF2 JASPAR yes 118331971
chr1 94535726 94535741 RUNX2 JASPAR yes 30851852
chr1 94535726 94535741 RUNX2 JASPAR yes 118331972
chr1 94535730 94535742 FOXI1 JASPAR yes 30851853
chr1 94535730 94535742 FOXI1 JASPAR yes 118331973
chr1 94535741 94535745 YY1 TRANSFAC yes 30851854
chr1 94535741 94535745 YY1 TRANSFAC yes 118331974
chr1 94535758 94535775 RXRA JASPAR yes 30851855
chr1 94535758 94535775 RXRA JASPAR yes 118331975
chr1 94535763 94535773 NKX2-3 JASPAR yes 30851856
chr1 94535763 94535773 NKX2-3 JASPAR yes 118331976
chr1 94535764 94535773 NKX2-8 JASPAR yes 30851857
chr1 94535764 94535773 NKX2-8 JASPAR yes 118331977
SNP sites on vista2527[chr1:94535371-94535770]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 94535383 rs78487907 C T
POLR2A TCF7L2
492307
chr1 94535514 rs558403798 G A
POLR2A TCF7L2
492308
chr1 94535531 rs181255129 C T
POLR2A TCF7L2
492309
chr1 94535546 rs3789411 G A
POLR2A TCF7L2
492310
chr1 94535689 rs4612636 A C
FOXH1 LHX6 ZBTB18
492311
chr1 94535768 rs543983946 C T
NKX2-3 NKX2-8 RXRA
492312
Genes possibly regulated by vista2527[chr1:94535371-94535770]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 94458393 94586688 - ABCA4 ENSG00000198691.7 94586688 0.98 0.98 910 49082
Expression level of Genes
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miRNAs possibly regulated by vista2527[chr1:94535371-94535770]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results