EnhancerDB
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  3. vista25270[chr17:56015325-56015755]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25270[chr17:56015325-56015755]
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Tissue distribution of vista25270
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Transcription factor that possibly regulate vista25270[chr17:56015325-56015755]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56015393 56015699 HNF4A UCSC Txn Factor no Conserved 108274808
chr17 56015455 56015620 HNF4G UCSC Txn Factor no Conserved 108274814
chr17 56015501 56015762 FOXA1 UCSC Txn Factor no Conserved 108274819
chr17 56015346 56015357 CDX2 JASPAR yes 21261513
chr17 56015346 56015357 CDX2 JASPAR yes 55001998
chr17 56015347 56015358 HOXA10 JASPAR yes 21261514
chr17 56015347 56015358 HOXA10 JASPAR yes 55001999
chr17 56015348 56015357 CDX1 JASPAR yes 21261515
chr17 56015348 56015357 CDX1 JASPAR yes 55002000
chr17 56015348 56015358 HOXA13 JASPAR yes 21261516
chr17 56015348 56015358 HOXB13 JASPAR yes 21261517
chr17 56015348 56015358 HOXC10 JASPAR yes 21261518
chr17 56015348 56015358 HOXD13 JASPAR yes 21261519
chr17 56015348 56015358 HOXA13 JASPAR yes 55002001
chr17 56015348 56015358 HOXB13 JASPAR yes 55002002
chr17 56015348 56015358 HOXC10 JASPAR yes 55002003
chr17 56015348 56015358 HOXD13 JASPAR yes 55002004
chr17 56015352 56015358 TBP TRANSFAC yes 21261520
chr17 56015352 56015358 TBP TRANSFAC yes 55002005
chr17 56015364 56015368 TEAD2 TRANSFAC yes 21261521
chr17 56015364 56015368 TEAD2 TRANSFAC yes 55002006
chr17 56015417 56015426 PITX3 JASPAR yes 21261522
chr17 56015417 56015426 PITX3 JASPAR yes 55002007
chr17 56015417 56015427 GSC2 JASPAR yes 21261523
chr17 56015417 56015427 GSC JASPAR yes 21261524
chr17 56015417 56015427 GSC2 JASPAR yes 55002008
chr17 56015417 56015427 GSC JASPAR yes 55002009
chr17 56015418 56015426 OTX1 JASPAR yes 21261525
chr17 56015418 56015426 OTX1 JASPAR yes 55002010
chr17 56015439 56015442 MYB TRANSFAC yes 21261526
chr17 56015439 56015442 MYB TRANSFAC yes 55002011
chr17 56015509 56015514 MYC TRANSFAC yes 21261527
chr17 56015509 56015514 MYC TRANSFAC yes 55002012
chr17 56015530 56015545 HNF4A JASPAR yes 21261528
chr17 56015530 56015545 HNF4A JASPAR yes 55002013
chr17 56015531 56015546 HNF4G JASPAR yes 21261529
chr17 56015531 56015546 HNF4G JASPAR yes 55002014
chr17 56015544 56015559 HNF4G JASPAR yes 21261530
chr17 56015544 56015559 HNF4G JASPAR yes 55002015
chr17 56015545 56015560 HNF4A JASPAR yes 21261531
chr17 56015545 56015560 HNF4A JASPAR yes 55002016
chr17 56015558 56015568 ERG JASPAR yes 21261532
chr17 56015558 56015568 ETS1 JASPAR yes 21261533
chr17 56015558 56015568 ERG JASPAR yes 55002017
chr17 56015558 56015568 ETS1 JASPAR yes 55002018
chr17 56015560 56015565 GATA2 JASPAR yes 21261534
chr17 56015560 56015565 GATA2 JASPAR yes 55002019
chr17 56015569 56015572 MYB TRANSFAC yes 21261535
chr17 56015569 56015572 MYB TRANSFAC yes 55002020
chr17 56015581 56015592 FOXH1 JASPAR yes 21261536
chr17 56015581 56015592 FOXH1 JASPAR yes 55002021
chr17 56015583 56015587 YY1 TRANSFAC yes 21261537
chr17 56015583 56015587 YY1 TRANSFAC yes 55002022
chr17 56015594 56015603 NKX2-8 JASPAR yes 21261538
chr17 56015594 56015603 NKX2-8 JASPAR yes 55002023
chr17 56015605 56015618 ZBTB18 JASPAR yes 21261539
chr17 56015605 56015618 ZBTB18 JASPAR yes 55002024
chr17 56015612 56015626 FOXF2 JASPAR yes 21261540
chr17 56015612 56015626 FOXF2 JASPAR yes 55002025
chr17 56015614 56015618 YY1 TRANSFAC yes 21261541
chr17 56015614 56015618 YY1 TRANSFAC yes 55002026
chr17 56015623 56015633 TBR1 JASPAR yes 21261542
chr17 56015623 56015633 TBR1 JASPAR yes 55002027
chr17 56015650 56015665 JUND JASPAR yes 21261543
chr17 56015650 56015665 JUND JASPAR yes 55002028
chr17 56015650 56015667 ZNF410 JASPAR yes 21261544
chr17 56015650 56015667 ZNF410 JASPAR yes 55002029
chr17 56015651 56015664 JUN JASPAR yes 21261545
chr17 56015651 56015664 JUN JASPAR yes 55002030
chr17 56015652 56015666 ATF7 JASPAR yes 21261546
chr17 56015652 56015666 BATF3 JASPAR yes 21261547
chr17 56015652 56015666 ATF7 JASPAR yes 55002031
chr17 56015652 56015666 BATF3 JASPAR yes 55002032
chr17 56015653 56015665 JDP2 JASPAR yes 21261548
chr17 56015653 56015665 JDP2 JASPAR yes 55002033
chr17 56015653 56015668 JUND JASPAR yes 21261549
chr17 56015653 56015668 JUND JASPAR yes 55002034
chr17 56015668 56015671 MYB TRANSFAC yes 21261550
chr17 56015668 56015671 MYB TRANSFAC yes 55002035
chr17 56015670 56015675 SP1 TRANSFAC yes 21261551
chr17 56015670 56015675 SP1 TRANSFAC yes 55002036
chr17 56015674 56015684 HOXB13 JASPAR yes 21261552
chr17 56015674 56015684 HOXB13 JASPAR yes 55002037
chr17 56015676 56015680 TEAD2 TRANSFAC yes 21261553
chr17 56015676 56015680 TEAD2 TRANSFAC yes 55002038
chr17 56015676 56015681 TBP TRANSFAC yes 21261554
chr17 56015676 56015681 TBP TRANSFAC yes 55002039
chr17 56015678 56015695 RARA JASPAR yes 21261555
chr17 56015678 56015695 RARA JASPAR yes 55002040
chr17 56015689 56015692 MYB TRANSFAC yes 21261556
chr17 56015689 56015692 MYB TRANSFAC yes 55002041
chr17 56015689 56015701 INSM1 JASPAR yes 21261557
chr17 56015689 56015701 INSM1 JASPAR yes 55002042
chr17 56015706 56015727 REST JASPAR yes 21261558
chr17 56015706 56015727 REST JASPAR yes 55002043
chr17 56015707 56015726 REST JASPAR yes 21261559
chr17 56015707 56015726 REST JASPAR yes 55002044
chr17 56015727 56015738 E2F6 JASPAR yes 21261560
chr17 56015727 56015738 E2F6 JASPAR yes 55002045
chr17 56015728 56015749 ZNF263 JASPAR yes 21261561
chr17 56015728 56015749 ZNF263 JASPAR yes 55002046
chr17 56015731 56015752 ZNF263 JASPAR yes 21261562
chr17 56015731 56015752 ZNF263 JASPAR yes 55002047
SNP sites on vista25270[chr17:56015325-56015755]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56015333 rs540633361 AT A no 4954632
chr17 56015367 rs189599140 T C
TEAD2
4954633
chr17 56015443 rs182447495 C T
HNF4A
4954634
chr17 56015613 rs557897595 T C
FOXA1 FOXF2 HNF4A HNF4G ZBTB18
4954635
chr17 56015638 rs111334068 C A,T
FOXA1 HNF4A
4954636
chr17 56015673 rs2585845 G A
FOXA1 HNF4A SP1
4954637
chr17 56015688 rs541235946 C A,T
FOXA1 HNF4A RARA
4954638
Genes possibly regulated by vista25270[chr17:56015325-56015755]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 12092
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 83071
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 50135
chr17 56066399 56082614 - RP11-159D12.5 ENSG00000266086.1 56082614 0.91 0.79 16077 33141
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 0.64 0.99 16078 31048
Expression level of Genes
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miRNAs possibly regulated by vista25270[chr17:56015325-56015755]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results