EnhancerDB
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  3. vista25273[chr17:56025910-56026308]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25273[chr17:56025910-56026308]
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Tissue distribution of vista25273
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Transcription factor that possibly regulate vista25273[chr17:56025910-56026308]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56025852 56026494 CTCF UCSC Txn Factor no Conserved 108274837
chr17 56025898 56026384 EP300 UCSC Txn Factor no Conserved 108274840
chr17 56025926 56026352 FOSL2 UCSC Txn Factor no Conserved 108274845
chr17 56026234 56026418 RUNX3 UCSC Txn Factor no Conserved 108274872
chr17 56025903 56025910 NKX3-1 JASPAR yes 21261699
chr17 56025903 56025910 NKX3-1 JASPAR yes 55003635
chr17 56025932 56025946 TCF7L2 JASPAR yes 21261700
chr17 56025932 56025946 TCF7L2 JASPAR yes 55003636
chr17 56025939 56025944 GATA2 JASPAR yes 21261701
chr17 56025939 56025944 GATA2 JASPAR yes 55003637
chr17 56025973 56025978 SP1 TRANSFAC yes 21261702
chr17 56025973 56025978 SP1 TRANSFAC yes 55003638
chr17 56025979 56026000 ZNF263 JASPAR yes 21261703
chr17 56025979 56026000 ZNF263 JASPAR yes 55003639
chr17 56025987 56025997 GABPA JASPAR yes 21261704
chr17 56025987 56025997 GABPA JASPAR yes 55003640
chr17 56025987 56026000 ELF1 JASPAR yes 21261705
chr17 56025987 56026000 ELF1 JASPAR yes 55003641
chr17 56025993 56025997 NFE TRANSFAC yes 21261706
chr17 56025993 56025997 NFE TRANSFAC yes 55003642
chr17 56026014 56026029 RUNX2 JASPAR yes 21261707
chr17 56026014 56026029 RUNX2 JASPAR yes 55003643
chr17 56026015 56026024 RUNX2 JASPAR yes 21261708
chr17 56026015 56026024 RUNX2 JASPAR yes 55003644
chr17 56026015 56026025 RUNX3 JASPAR yes 21261709
chr17 56026015 56026025 RUNX3 JASPAR yes 55003645
chr17 56026015 56026026 RUNX1 JASPAR yes 21261710
chr17 56026015 56026026 RUNX1 JASPAR yes 55003646
chr17 56026020 56026026 SOX10 JASPAR yes 21261711
chr17 56026020 56026026 SOX10 JASPAR yes 55003647
chr17 56026023 56026038 IRF9 JASPAR yes 21261712
chr17 56026023 56026038 IRF9 JASPAR yes 55003648
chr17 56026025 56026039 STAT1 JASPAR yes 21261713
chr17 56026025 56026039 STAT1 JASPAR yes 55003649
chr17 56026025 56026040 STAT2 JASPAR yes 21261714
chr17 56026025 56026040 STAT2 JASPAR yes 55003650
chr17 56026025 56026043 IRF2 JASPAR yes 21261715
chr17 56026025 56026043 IRF2 JASPAR yes 55003651
chr17 56026044 56026048 YY1 TRANSFAC yes 21261716
chr17 56026044 56026048 YY1 TRANSFAC yes 55003652
chr17 56026052 56026067 TFAP2C JASPAR yes 21261717
chr17 56026052 56026067 TFAP2C JASPAR yes 55003653
chr17 56026082 56026096 JUN JASPAR yes 21261718
chr17 56026082 56026096 JUN JASPAR yes 55003654
chr17 56026085 56026096 FOSL2 JASPAR yes 21261719
chr17 56026085 56026096 JUNB JASPAR yes 21261720
chr17 56026085 56026096 FOSL2 JASPAR yes 55003655
chr17 56026085 56026096 JUNB JASPAR yes 55003656
chr17 56026086 56026097 FOS JASPAR yes 21261721
chr17 56026086 56026097 FOSL1 JASPAR yes 21261722
chr17 56026086 56026097 JUND JASPAR yes 21261723
chr17 56026086 56026097 NFE2 JASPAR yes 21261724
chr17 56026086 56026097 FOS JASPAR yes 55003657
chr17 56026086 56026097 FOSL1 JASPAR yes 55003658
chr17 56026086 56026097 JUND JASPAR yes 55003659
chr17 56026086 56026097 NFE2 JASPAR yes 55003660
chr17 56026087 56026096 JDP2 JASPAR yes 21261725
chr17 56026087 56026096 JDP2 JASPAR yes 55003661
chr17 56026087 56026098 FOSL2 JASPAR yes 21261726
chr17 56026087 56026098 JUNB JASPAR yes 21261727
chr17 56026087 56026098 FOSL2 JASPAR yes 55003662
chr17 56026087 56026098 JUNB JASPAR yes 55003663
chr17 56026087 56026101 JUN JASPAR yes 21261728
chr17 56026087 56026101 JUN JASPAR yes 55003664
chr17 56026115 56026119 NFE TRANSFAC yes 21261729
chr17 56026115 56026119 NFE TRANSFAC yes 55003665
chr17 56026115 56026120 GATA1 TRANSFAC yes 21261730
chr17 56026115 56026120 GATA1 TRANSFAC yes 55003666
chr17 56026115 56026121 GATA3 JASPAR yes 21261731
chr17 56026115 56026121 GATA3 JASPAR yes 55003667
chr17 56026117 56026129 TEAD1 JASPAR yes 21261732
chr17 56026117 56026129 TEAD1 JASPAR yes 55003668
chr17 56026119 56026129 TEAD4 JASPAR yes 21261733
chr17 56026119 56026129 TEAD4 JASPAR yes 55003669
chr17 56026120 56026128 TEAD3 JASPAR yes 21261734
chr17 56026120 56026128 TEAD3 JASPAR yes 55003670
chr17 56026126 56026140 SPIC JASPAR yes 21261735
chr17 56026126 56026140 SPIC JASPAR yes 55003671
chr17 56026171 56026175 YY1 TRANSFAC yes 21261736
chr17 56026171 56026175 YY1 TRANSFAC yes 55003672
chr17 56026186 56026194 ISL2 JASPAR yes 21261737
chr17 56026186 56026194 ISL2 JASPAR yes 55003673
chr17 56026201 56026215 JUN JASPAR yes 21261738
chr17 56026201 56026215 JUN JASPAR yes 55003674
chr17 56026205 56026216 FOS JASPAR yes 21261739
chr17 56026205 56026216 JUND JASPAR yes 21261740
chr17 56026205 56026216 FOS JASPAR yes 55003675
chr17 56026205 56026216 JUND JASPAR yes 55003676
chr17 56026206 56026217 FOSL2 JASPAR yes 21261741
chr17 56026206 56026217 FOSL2 JASPAR yes 55003677
chr17 56026207 56026213 JUN TRANSFAC yes 21261742
chr17 56026207 56026213 JUN TRANSFAC yes 55003678
chr17 56026209 56026224 AR JASPAR yes 21261743
chr17 56026209 56026224 AR JASPAR yes 55003679
chr17 56026228 56026237 JDP2 JASPAR yes 21261744
chr17 56026228 56026237 JDP2 JASPAR yes 55003680
chr17 56026276 56026280 YY1 TRANSFAC yes 21261745
chr17 56026276 56026280 YY1 TRANSFAC yes 55003681
chr17 56026282 56026298 SOX4 JASPAR yes 21261746
chr17 56026282 56026298 SOX4 JASPAR yes 55003682
chr17 56026298 56026310 NHLH1 JASPAR yes 21261747
chr17 56026298 56026310 NHLH1 JASPAR yes 55003683
chr17 56026299 56026309 MSC JASPAR yes 21261748
chr17 56026299 56026309 NHLH1 JASPAR yes 21261749
chr17 56026299 56026309 TFAP4 JASPAR yes 21261750
chr17 56026299 56026309 MSC JASPAR yes 55003684
chr17 56026299 56026309 NHLH1 JASPAR yes 55003685
chr17 56026299 56026309 TFAP4 JASPAR yes 55003686
SNP sites on vista25273[chr17:56025910-56026308]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56025952 rs551226184 A G
CTCF EP300 FOSL2
4954746
chr17 56026118 rs140751659 A G
CTCF EP300 FOSL2 GATA1 GATA3 NFE TEAD1
4954747
chr17 56026128 rs117245909 T C
CTCF EP300 FOSL2 SPIC TEAD1 TEAD3 TEAD4
4954748
chr17 56026245 rs143308674 T A
CTCF EP300 FOSL2 RUNX3
4954749
Genes possibly regulated by vista25273[chr17:56025910-56026308]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55916842 55927417 - MRPS23 ENSG00000181610.8 55927417 0.7 0.99 16074 1507
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 93624
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 60688
chr17 56066399 56082614 - RP11-159D12.5 ENSG00000266086.1 56082614 0.91 0.79 16077 43694
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 0.64 0.99 16078 41601
Expression level of Genes
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miRNAs possibly regulated by vista25273[chr17:56025910-56026308]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results