EnhancerDB
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  3. vista25274[chr17:56064193-56064677]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25274[chr17:56064193-56064677]
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Tissue distribution of vista25274
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Transcription factor that possibly regulate vista25274[chr17:56064193-56064677]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56064123 56066554 POLR2A UCSC Txn Factor no Conserved 108274878
chr17 56064334 56064667 JUND UCSC Txn Factor no Conserved 108274885
chr17 56064386 56064629 FOSL2 UCSC Txn Factor no Conserved 108274896
chr17 56064206 56064211 H4TF1 TRANSFAC yes 21261751
chr17 56064220 56064226 TCF1 TRANSFAC yes 21261752
chr17 56064224 56064229 ETS2 TRANSFAC yes 21261753
chr17 56064232 56064235 MYB TRANSFAC yes 21261754
chr17 56064241 56064252 E2F1 JASPAR yes 21261755
chr17 56064242 56064247 SP1 TRANSFAC yes 21261756
chr17 56064242 56064253 E2F4 JASPAR yes 21261757
chr17 56064242 56064253 E2F6 JASPAR yes 21261758
chr17 56064243 56064248 SP1 TRANSFAC yes 21261759
chr17 56064246 56064251 ETS2 TRANSFAC yes 21261760
chr17 56064254 56064263 NKX3-2 JASPAR yes 21261761
chr17 56064254 56064264 NKX2-3 JASPAR yes 21261762
chr17 56064255 56064263 ISL2 JASPAR yes 21261763
chr17 56064255 56064264 NKX2-8 JASPAR yes 21261764
chr17 56064278 56064281 MYB TRANSFAC yes 21261765
chr17 56064305 56064320 JUND JASPAR yes 21261766
chr17 56064307 56064314 JUN TRANSFAC yes 21261767
chr17 56064344 56064359 STAT2 JASPAR yes 21261768
chr17 56064363 56064381 NR3C1 JASPAR yes 21261769
chr17 56064389 56064395 NFIC JASPAR yes 21261770
chr17 56064397 56064408 NFKB1 JASPAR yes 21261771
chr17 56064400 56064404 H4TF2 TRANSFAC yes 21261772
chr17 56064415 56064427 E2F8 JASPAR yes 21261773
chr17 56064417 56064422 SP1 TRANSFAC yes 21261774
chr17 56064418 56064423 SP1 TRANSFAC yes 21261775
chr17 56064421 56064425 LFA1 TRANSFAC yes 21261776
chr17 56064431 56064441 NFIA JASPAR yes 21261777
chr17 56064433 56064439 NFIC JASPAR yes 21261778
chr17 56064438 56064444 HiNF-A TRANSFAC yes 21261779
chr17 56064455 56064469 TCF7L2 JASPAR yes 21261780
chr17 56064455 56064470 STAT2 JASPAR yes 21261781
chr17 56064456 56064470 STAT1 JASPAR yes 21261782
chr17 56064497 56064511 JUN JASPAR yes 21261783
chr17 56064500 56064511 FOSL2 JASPAR yes 21261784
chr17 56064500 56064511 JUNB JASPAR yes 21261785
chr17 56064501 56064512 FOS JASPAR yes 21261786
chr17 56064501 56064512 FOSL1 JASPAR yes 21261787
chr17 56064501 56064512 JUND JASPAR yes 21261788
chr17 56064501 56064512 NFE2 JASPAR yes 21261789
chr17 56064502 56064509 JUN TRANSFAC yes 21261790
chr17 56064502 56064511 JDP2 JASPAR yes 21261791
chr17 56064502 56064513 FOSL2 JASPAR yes 21261792
chr17 56064502 56064513 JUNB JASPAR yes 21261793
chr17 56064502 56064516 JUN JASPAR yes 21261794
chr17 56064503 56064514 BATF JASPAR yes 21261795
chr17 56064518 56064524 LEF1 TRANSFAC yes 21261796
chr17 56064518 56064524 SOX10 JASPAR yes 21261797
chr17 56064526 56064536 HINFP JASPAR yes 21261798
chr17 56064530 56064545 FOXA1 JASPAR yes 21261799
chr17 56064531 56064537 LEF1 TRANSFAC yes 21261800
chr17 56064531 56064537 SOX10 JASPAR yes 21261801
chr17 56064531 56064546 FOXP1 JASPAR yes 21261802
chr17 56064532 56064544 FOXC2 JASPAR yes 21261803
chr17 56064534 56064545 FOXA1 JASPAR yes 21261804
chr17 56064556 56064562 PEA3 TRANSFAC yes 21261805
chr17 56064568 56064589 ZNF263 JASPAR yes 21261806
chr17 56064571 56064576 SP1 TRANSFAC yes 21261807
chr17 56064572 56064584 E2F8 JASPAR yes 21261808
chr17 56064637 56064643 SP1 TRANSFAC yes 21261809
chr17 56064643 56064649 NFE2 TRANSFAC yes 21261810
chr17 56064644 56064656 TFAP2A JASPAR yes 21261811
chr17 56064644 56064656 TFAP2B JASPAR yes 21261812
chr17 56064644 56064656 TFAP2C JASPAR yes 21261813
chr17 56064645 56064654 TFAP2A JASPAR yes 21261814
chr17 56064663 56064676 NFKB1 JASPAR yes 21261815
chr17 56064663 56064676 NFKB2 JASPAR yes 21261816
chr17 56064664 56064674 RELA JASPAR yes 21261817
chr17 56064664 56064674 REL JASPAR yes 21261818
chr17 56064664 56064675 NFKB1 JASPAR yes 21261819
chr17 56064664 56064677 NFKB1 JASPAR yes 21261820
chr17 56064664 56064677 NFKB2 JASPAR yes 21261821
chr17 56064665 56064675 NFKB1 JASPAR yes 21261822
chr17 56064665 56064675 RELA JASPAR yes 21261823
chr17 56064665 56064676 NFKB1 JASPAR yes 21261824
chr17 56064666 56064676 NFKB1 JASPAR yes 21261825
chr17 56064666 56064676 RELA JASPAR yes 21261826
SNP sites on vista25274[chr17:56064193-56064677]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56064227 rs530364793 G A
ETS2 POLR2A
4954847
chr17 56064452 rs2333201 A T
FOSL2 JUND POLR2A
4954848
chr17 56064482 rs147313593 C T
FOSL2 JUND POLR2A
4954849
Genes possibly regulated by vista25274[chr17:56064193-56064677]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0.72 1.0 16075 68491
chr17 56048910 56065620 - VEZF1 ENSG00000136451.4 56065620 0.72 1.0 16076 99057
chr17 56066399 56082614 - RP11-159D12.5 ENSG00000266086.1 56082614 0.91 0.79 16077 82063
chr17 56080721 56084707 - SRSF1 ENSG00000136450.8 56084707 0.64 0.99 16078 79970
chr17 56160776 56172897 + DYNLL2 ENSG00000264364.2 56160776 0.67 1.0 16079 3901
Expression level of Genes
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miRNAs possibly regulated by vista25274[chr17:56064193-56064677]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results