EnhancerDB
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  3. vista25282[chr17:56359005-56359460]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25282[chr17:56359005-56359460]
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Tissue distribution of vista25282
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Transcription factor that possibly regulate vista25282[chr17:56359005-56359460]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56359008 56359023 TFAP2A JASPAR yes 21262100
chr17 56359008 56359023 TFAP2C JASPAR yes 21262101
chr17 56359010 56359022 TFAP2A JASPAR yes 21262102
chr17 56359010 56359022 TFAP2B JASPAR yes 21262103
chr17 56359010 56359022 TFAP2C JASPAR yes 21262104
chr17 56359010 56359024 EBF1 JASPAR yes 21262105
chr17 56359010 56359024 GLIS2 JASPAR yes 21262106
chr17 56359010 56359025 TFAP2A JASPAR yes 21262107
chr17 56359011 56359022 EBF1 JASPAR yes 21262108
chr17 56359018 56359023 ETS2 TRANSFAC yes 21262109
chr17 56359027 56359042 PRDM1 JASPAR yes 21262110
chr17 56359028 56359042 TCF7L2 JASPAR yes 21262111
chr17 56359028 56359043 LEF1 JASPAR yes 21262112
chr17 56359029 56359050 IRF1 JASPAR yes 21262113
chr17 56359032 56359038 TCF4 TRANSFAC yes 21262114
chr17 56359045 56359065 PPARG JASPAR yes 21262115
chr17 56359052 56359067 JUND JASPAR yes 21262116
chr17 56359053 56359066 JUN JASPAR yes 21262117
chr17 56359061 56359065 H1TF2 TRANSFAC yes 21262118
chr17 56359061 56359065 NFE TRANSFAC yes 21262119
chr17 56359061 56359065 SRF TRANSFAC yes 21262120
chr17 56359070 56359081 USF2 JASPAR yes 21262121
chr17 56359071 56359089 ESR1 JASPAR yes 21262122
chr17 56359078 56359084 YY1 JASPAR yes 21262123
chr17 56359098 56359101 MYB TRANSFAC yes 21262124
chr17 56359114 56359130 NFYA JASPAR yes 21262125
chr17 56359119 56359123 H1TF2 TRANSFAC yes 21262126
chr17 56359119 56359123 NFE TRANSFAC yes 21262127
chr17 56359119 56359123 SRF TRANSFAC yes 21262128
chr17 56359124 56359128 LFA1 TRANSFAC yes 21262129
chr17 56359142 56359147 SP1 TRANSFAC yes 21262130
chr17 56359143 56359157 PLAG1 JASPAR yes 21262131
chr17 56359144 56359158 PLAG1 JASPAR yes 21262132
chr17 56359154 56359167 ELF1 JASPAR yes 21262133
chr17 56359156 56359167 ETV2 JASPAR yes 21262134
chr17 56359157 56359167 ERF JASPAR yes 21262135
chr17 56359157 56359167 ERG JASPAR yes 21262136
chr17 56359157 56359167 ETS1 JASPAR yes 21262137
chr17 56359157 56359167 FLI1 JASPAR yes 21262138
chr17 56359158 56359166 FEV JASPAR yes 21262139
chr17 56359189 56359200 FLI1 JASPAR yes 21262140
chr17 56359190 56359198 EHF JASPAR yes 21262141
chr17 56359199 56359213 EBF1 JASPAR yes 21262142
chr17 56359201 56359212 EBF1 JASPAR yes 21262143
chr17 56359204 56359220 ZNF143 JASPAR yes 21262144
chr17 56359205 56359210 TFAP2A TRANSFAC yes 21262145
chr17 56359205 56359211 MZF1 JASPAR yes 21262146
chr17 56359210 56359222 ZBTB7A JASPAR yes 21262147
chr17 56359231 56359234 MYB TRANSFAC yes 21262148
chr17 56359231 56359242 FLI1 JASPAR yes 21262149
chr17 56359232 56359242 ETV6 JASPAR yes 21262150
chr17 56359232 56359245 ELF1 JASPAR yes 21262151
chr17 56359232 56359246 SPI1 JASPAR yes 21262152
chr17 56359232 56359246 SPIC JASPAR yes 21262153
chr17 56359232 56359253 ZNF263 JASPAR yes 21262154
chr17 56359233 56359240 SPI1 JASPAR yes 21262155
chr17 56359233 56359241 EHF JASPAR yes 21262156
chr17 56359235 56359242 SPIB JASPAR yes 21262157
chr17 56359235 56359256 ZNF263 JASPAR yes 21262158
chr17 56359239 56359260 ZNF263 JASPAR yes 21262159
chr17 56359240 56359244 NFE TRANSFAC yes 21262160
chr17 56359241 56359246 GATA2 JASPAR yes 21262161
chr17 56359242 56359251 SP1 TRANSFAC yes 21262162
chr17 56359244 56359265 ZNF263 JASPAR yes 21262163
chr17 56359245 56359266 ZNF263 JASPAR yes 21262164
chr17 56359248 56359269 ZNF263 JASPAR yes 21262165
chr17 56359254 56359269 LEF1 JASPAR yes 21262166
chr17 56359284 56359288 NFE TRANSFAC yes 21262167
chr17 56359284 56359305 ZNF263 JASPAR yes 21262168
chr17 56359287 56359308 ZNF263 JASPAR yes 21262169
chr17 56359295 56359305 SP1 JASPAR yes 21262170
chr17 56359295 56359316 ZNF263 JASPAR yes 21262171
chr17 56359301 56359322 ZNF263 JASPAR yes 21262172
chr17 56359302 56359308 MZF1 JASPAR yes 21262173
chr17 56359308 56359320 TAL1 JASPAR yes 21262174
chr17 56359310 56359320 OLIG3 JASPAR yes 21262175
chr17 56359324 56359329 H4TF1 TRANSFAC yes 21262176
chr17 56359327 56359348 REST JASPAR yes 21262177
chr17 56359328 56359347 REST JASPAR yes 21262178
chr17 56359347 56359359 GRHL1 JASPAR yes 21262179
chr17 56359348 56359358 TFCP2 JASPAR yes 21262180
chr17 56359350 56359365 RUNX2 JASPAR yes 21262181
chr17 56359354 56359364 RUNX3 JASPAR yes 21262182
chr17 56359355 56359364 RUNX2 JASPAR yes 21262183
chr17 56359374 56359394 ESR1 JASPAR yes 21262184
chr17 56359382 56359396 PLAG1 JASPAR yes 21262185
chr17 56359384 56359393 TFAP2A JASPAR yes 21262186
chr17 56359414 56359419 MYC TRANSFAC yes 21262187
chr17 56359430 56359444 JUN JASPAR yes 21262188
chr17 56359430 56359445 HNF1A JASPAR yes 21262189
chr17 56359431 56359444 HNF1B JASPAR yes 21262190
chr17 56359433 56359444 FOSL2 JASPAR yes 21262191
chr17 56359433 56359444 JUNB JASPAR yes 21262192
chr17 56359434 56359445 FOS JASPAR yes 21262193
SNP sites on vista25282[chr17:56359005-56359460]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56359219 rs182370673 C T
ZBTB7A ZNF143
4955740
chr17 56359220 rs377159190 G A
ZBTB7A ZNF143
4955741
chr17 56359239 rs34576380 C T
EHF ELF1 ETV6 FLI1 SPI1 SPIB SPIC ZNF263
4955742
chr17 56359295 rs140508800 ACTC A
SP1 ZNF263
4955743
chr17 56359389 rs187748029 A C
ESR1 PLAG1 TFAP2A
4955744
Genes possibly regulated by vista25282[chr17:56359005-56359460]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56270098 56282535 + EPX ENSG00000121053.5 56270098 0.99 1.0 16082 11093
chr17 56282803 56296966 - MKS1 ENSG00000011143.12 56296966 0.77 1.0 16083 37961
chr17 56295909 56345879 + LPO ENSG00000167419.6 56295909 0.93 1.0 16084 36904
chr17 56347217 56358296 - MPO ENSG00000005381.6 56358296 0.93 1.0 16085 99291
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 53308
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 29006
Expression level of Genes
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miRNAs possibly regulated by vista25282[chr17:56359005-56359460]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 56408606 56408628 - hsa-miR-142-3p MIMAT0000434 56409880 0.07503236898520578 0.956451 0.855943 724
Expression level of miRNAs
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