EnhancerDB
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  3. vista25284[chr17:56391648-56391970]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25284[chr17:56391648-56391970]
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Tissue distribution of vista25284
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Transcription factor that possibly regulate vista25284[chr17:56391648-56391970]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56391654 56391659 SP1 TRANSFAC yes 21262242
chr17 56391676 56391685 PITX3 JASPAR yes 21262243
chr17 56391676 56391686 GSC2 JASPAR yes 21262244
chr17 56391676 56391686 GSC JASPAR yes 21262245
chr17 56391677 56391685 OTX1 JASPAR yes 21262246
chr17 56391681 56391687 MZF1 JASPAR yes 21262247
chr17 56391686 56391706 ESR1 JASPAR yes 21262248
chr17 56391690 56391708 ESR2 JASPAR yes 21262249
chr17 56391698 56391716 SRF JASPAR yes 21262250
chr17 56391700 56391710 RORA JASPAR yes 21262251
chr17 56391700 56391716 SRF JASPAR yes 21262252
chr17 56391700 56391718 SRF JASPAR yes 21262253
chr17 56391701 56391713 SRF JASPAR yes 21262254
chr17 56391703 56391715 SRF JASPAR yes 21262255
chr17 56391706 56391710 YY1 TRANSFAC yes 21262256
chr17 56391708 56391718 NFATC3 JASPAR yes 21262257
chr17 56391710 56391717 NFATC2 JASPAR yes 21262258
chr17 56391727 56391740 DUXA JASPAR yes 21262259
chr17 56391728 56391739 PHOX2A JASPAR yes 21262260
chr17 56391731 56391741 ALX3 JASPAR yes 21262261
chr17 56391731 56391741 EMX1 JASPAR yes 21262262
chr17 56391731 56391741 HOXB2 JASPAR yes 21262263
chr17 56391731 56391741 HOXB3 JASPAR yes 21262264
chr17 56391731 56391741 MEOX2 JASPAR yes 21262265
chr17 56391731 56391741 MNX1 JASPAR yes 21262266
chr17 56391732 56391740 LMX1A JASPAR yes 21262267
chr17 56391732 56391740 LMX1B JASPAR yes 21262268
chr17 56391732 56391740 NKX6-1 JASPAR yes 21262269
chr17 56391732 56391740 NKX6-2 JASPAR yes 21262270
chr17 56391732 56391740 PDX1 JASPAR yes 21262271
chr17 56391732 56391740 VAX1 JASPAR yes 21262272
chr17 56391732 56391740 VAX2 JASPAR yes 21262273
chr17 56391732 56391740 VSX1 JASPAR yes 21262274
chr17 56391732 56391745 DUXA JASPAR yes 21262275
chr17 56391733 56391744 DUX4 JASPAR yes 21262276
chr17 56391733 56391744 PHOX2A JASPAR yes 21262277
chr17 56391733 56391744 PROP1 JASPAR yes 21262278
chr17 56391751 56391766 JUND JASPAR yes 21262279
chr17 56391754 56391769 JUND JASPAR yes 21262280
chr17 56391755 56391768 JUN JASPAR yes 21262281
chr17 56391772 56391777 GATA2 JASPAR yes 21262282
chr17 56391778 56391783 SP1 TRANSFAC yes 21262283
chr17 56391782 56391786 H4TF2 TRANSFAC yes 21262284
chr17 56391797 56391807 MYF6 JASPAR yes 21262285
chr17 56391805 56391815 HOXA13 JASPAR yes 21262286
chr17 56391805 56391815 HOXB13 JASPAR yes 21262287
chr17 56391805 56391815 HOXD13 JASPAR yes 21262288
chr17 56391805 56391816 HOXC13 JASPAR yes 21262289
chr17 56391809 56391813 TEAD2 TRANSFAC yes 21262290
chr17 56391823 56391844 ZNF263 JASPAR yes 21262291
chr17 56391826 56391847 ZNF263 JASPAR yes 21262292
chr17 56391838 56391859 ZNF263 JASPAR yes 21262293
chr17 56391854 56391869 RUNX2 JASPAR yes 21262294
chr17 56391855 56391866 RUNX1 JASPAR yes 21262295
chr17 56391862 56391868 GATA3 JASPAR yes 21262296
chr17 56391882 56391896 TLX1 JASPAR yes 21262297
chr17 56391894 56391899 ETS2 TRANSFAC yes 21262298
chr17 56391897 56391910 ZBTB18 JASPAR yes 21262299
chr17 56391910 56391915 MYC TRANSFAC yes 21262300
chr17 56391930 56391935 ETS2 TRANSFAC yes 21262301
chr17 56391930 56391948 NR3C1 JASPAR yes 21262302
chr17 56391937 56391948 NFKB1 JASPAR yes 21262303
chr17 56391943 56391957 PLAG1 JASPAR yes 21262304
chr17 56391951 56391964 TFAP2A JASPAR yes 21262305
chr17 56391951 56391964 TFAP2B JASPAR yes 21262306
chr17 56391951 56391964 TFAP2C JASPAR yes 21262307
chr17 56391952 56391965 TFAP2A JASPAR yes 21262308
chr17 56391952 56391965 TFAP2B JASPAR yes 21262309
chr17 56391952 56391965 TFAP2C JASPAR yes 21262310
chr17 56391952 56391966 EBF1 JASPAR yes 21262311
chr17 56391953 56391964 EBF1 JASPAR yes 21262312
SNP sites on vista25284[chr17:56391648-56391970]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56391719 rs2526382 G A,T no 4955784
chr17 56391937 rs114907712 C T
NFKB1 NR3C1
4955785
Genes possibly regulated by vista25284[chr17:56391648-56391970]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56282803 56296966 - MKS1 ENSG00000011143.12 56296966 0.77 1.0 16083 5318
chr17 56295909 56345879 + LPO ENSG00000167419.6 56295909 0.93 1.0 16084 4261
chr17 56347217 56358296 - MPO ENSG00000005381.6 56358296 0.93 1.0 16085 66648
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 85818
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 61516
Expression level of Genes
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miRNAs possibly regulated by vista25284[chr17:56391648-56391970]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results