EnhancerDB
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  3. vista25290[chr17:56417498-56417914]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25290[chr17:56417498-56417914]
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Tissue distribution of vista25290
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Transcription factor that possibly regulate vista25290[chr17:56417498-56417914]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56417316 56417752 MAX UCSC Txn Factor no Conserved 108275156
chr17 56417536 56417556 ESR1 JASPAR yes 21262593
chr17 56417536 56417556 ESR1 JASPAR yes 55013313
chr17 56417537 56417551 TLX1 JASPAR yes 21262594
chr17 56417537 56417551 TLX1 JASPAR yes 55013314
chr17 56417546 56417557 USF2 JASPAR yes 21262595
chr17 56417546 56417557 USF2 JASPAR yes 55013315
chr17 56417547 56417557 MAX JASPAR yes 21262596
chr17 56417547 56417557 MAX JASPAR yes 55013316
chr17 56417560 56417566 MZF1 JASPAR yes 21262597
chr17 56417560 56417566 MZF1 JASPAR yes 55013317
chr17 56417568 56417586 NFYA JASPAR yes 21262598
chr17 56417568 56417586 NFYA JASPAR yes 55013318
chr17 56417574 56417589 NFYB JASPAR yes 21262599
chr17 56417574 56417589 NFYB JASPAR yes 55013319
chr17 56417610 56417625 AR JASPAR yes 21262600
chr17 56417610 56417625 AR JASPAR yes 55013320
chr17 56417613 56417617 NFE TRANSFAC yes 21262601
chr17 56417613 56417617 NFE TRANSFAC yes 55013321
chr17 56417628 56417632 ESR1 TRANSFAC yes 21262602
chr17 56417628 56417632 ESR1 TRANSFAC yes 55013322
chr17 56417670 56417682 IRF1 JASPAR yes 21262603
chr17 56417670 56417682 IRF1 JASPAR yes 55013323
chr17 56417674 56417682 MEIS2 JASPAR yes 21262604
chr17 56417674 56417682 MEIS3 JASPAR yes 21262605
chr17 56417674 56417682 MEIS2 JASPAR yes 55013324
chr17 56417674 56417682 MEIS3 JASPAR yes 55013325
chr17 56417675 56417687 PKNOX1 JASPAR yes 21262606
chr17 56417675 56417687 PKNOX2 JASPAR yes 21262607
chr17 56417675 56417687 TGIF1 JASPAR yes 21262608
chr17 56417675 56417687 TGIF2 JASPAR yes 21262609
chr17 56417675 56417687 PKNOX1 JASPAR yes 55013326
chr17 56417675 56417687 PKNOX2 JASPAR yes 55013327
chr17 56417675 56417687 TGIF1 JASPAR yes 55013328
chr17 56417675 56417687 TGIF2 JASPAR yes 55013329
chr17 56417676 56417686 TFAP4 JASPAR yes 21262610
chr17 56417676 56417686 TFAP4 JASPAR yes 55013330
chr17 56417683 56417702 RFX2 JASPAR yes 21262611
chr17 56417683 56417702 RFX2 JASPAR yes 55013331
chr17 56417685 56417700 RFX5 JASPAR yes 21262612
chr17 56417685 56417700 RFX5 JASPAR yes 55013332
chr17 56417687 56417703 RFX2 JASPAR yes 21262613
chr17 56417687 56417703 RFX4 JASPAR yes 21262614
chr17 56417687 56417703 RFX2 JASPAR yes 55013333
chr17 56417687 56417703 RFX4 JASPAR yes 55013334
chr17 56417711 56417725 SPIC JASPAR yes 21262615
chr17 56417711 56417725 SPIC JASPAR yes 55013335
chr17 56417711 56417729 NR3C1 JASPAR yes 21262616
chr17 56417711 56417729 NR3C1 JASPAR yes 55013336
chr17 56417732 56417736 YY1 TRANSFAC yes 21262617
chr17 56417732 56417736 YY1 TRANSFAC yes 55013337
chr17 56417732 56417743 CEBPB JASPAR yes 21262618
chr17 56417732 56417743 CEBPB JASPAR yes 55013338
chr17 56417733 56417744 CEBPA JASPAR yes 21262619
chr17 56417733 56417744 CEBPA JASPAR yes 55013339
chr17 56417738 56417748 TFE3 JASPAR yes 21262620
chr17 56417738 56417748 TFEB JASPAR yes 21262621
chr17 56417738 56417748 TFEC JASPAR yes 21262622
chr17 56417738 56417748 TFE3 JASPAR yes 55013340
chr17 56417738 56417748 TFEB JASPAR yes 55013341
chr17 56417738 56417748 TFEC JASPAR yes 55013342
chr17 56417742 56417753 DMRT3 JASPAR yes 21262623
chr17 56417742 56417753 DMRT3 JASPAR yes 55013343
chr17 56417750 56417762 YY1 JASPAR yes 21262624
chr17 56417750 56417762 YY1 JASPAR yes 55013344
chr17 56417766 56417781 SOX21 JASPAR yes 21262625
chr17 56417766 56417781 SOX21 JASPAR yes 55013345
chr17 56417769 56417780 ESRRB JASPAR yes 21262626
chr17 56417769 56417780 ESRRB JASPAR yes 55013346
chr17 56417783 56417794 PHOX2A JASPAR yes 21262627
chr17 56417783 56417794 PHOX2A JASPAR yes 55013347
chr17 56417809 56417820 DMRT3 JASPAR yes 21262628
chr17 56417809 56417820 DMRT3 JASPAR yes 55013348
chr17 56417813 56417818 GATA2 JASPAR yes 21262629
chr17 56417813 56417818 GATA2 JASPAR yes 55013349
chr17 56417814 56417826 FOXI1 JASPAR yes 21262630
chr17 56417814 56417826 FOXI1 JASPAR yes 55013350
chr17 56417821 56417834 ELF1 JASPAR yes 21262631
chr17 56417821 56417834 ELF1 JASPAR yes 55013351
chr17 56417825 56417830 ETS2 TRANSFAC yes 21262632
chr17 56417825 56417830 ETS2 TRANSFAC yes 55013352
chr17 56417825 56417833 FEV JASPAR yes 21262633
chr17 56417825 56417833 FEV JASPAR yes 55013353
chr17 56417826 56417833 SPI1 JASPAR yes 21262634
chr17 56417826 56417833 SPI1 JASPAR yes 55013354
chr17 56417834 56417838 TEAD2 TRANSFAC yes 21262635
chr17 56417834 56417838 TEAD2 TRANSFAC yes 55013355
chr17 56417836 56417839 MYB TRANSFAC yes 21262636
chr17 56417836 56417839 MYB TRANSFAC yes 55013356
chr17 56417841 56417845 YY1 TRANSFAC yes 21262637
chr17 56417841 56417845 YY1 TRANSFAC yes 55013357
chr17 56417869 56417881 HES5 JASPAR yes 21262638
chr17 56417869 56417881 HES7 JASPAR yes 21262639
chr17 56417869 56417881 PKNOX2 JASPAR yes 21262640
chr17 56417869 56417881 HES5 JASPAR yes 55013358
chr17 56417869 56417881 HES7 JASPAR yes 55013359
chr17 56417869 56417881 PKNOX2 JASPAR yes 55013360
chr17 56417885 56417901 T JASPAR yes 21262641
chr17 56417885 56417901 T JASPAR yes 55013361
chr17 56417899 56417913 PLAG1 JASPAR yes 21262642
chr17 56417899 56417913 PLAG1 JASPAR yes 55013362
chr17 56417906 56417917 E2F6 JASPAR yes 21262643
chr17 56417906 56417917 E2F6 JASPAR yes 55013363
SNP sites on vista25290[chr17:56417498-56417914]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56417579 rs114699146 T C
MAX NFYA NFYB POLR2A
4956022
chr17 56417717 rs543700273 GAGTC G
MAX NR3C1 POLR2A SPIC
4956023
chr17 56417841 rs544237918 A G
POLR2A YY1
4956024
chr17 56417910 rs148825652 C T
E2F6 PLAG1 POLR2A
4956025
Genes possibly regulated by vista25290[chr17:56417498-56417914]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56347217 56358296 - MPO ENSG00000005381.6 56358296 0.93 1.0 16085 40798
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 88654
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 87460
chr17 56429861 56494956 - RNF43 ENSG00000108375.8 56494956 0.74 1.0 16088 22958
Expression level of Genes
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miRNAs possibly regulated by vista25290[chr17:56417498-56417914]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results