EnhancerDB
  1. Home
  2. Enhancers
  3. vista25294[chr17:56428194-56428499]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25294[chr17:56428194-56428499]
Back to top
Tissue distribution of vista25294
Back to top
Transcription factor that possibly regulate vista25294[chr17:56428194-56428499]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 56428195 56428210 FOXP1 JASPAR yes 21262673
chr17 56428196 56428211 FOXP1 JASPAR yes 21262674
chr17 56428196 56428217 IRF1 JASPAR yes 21262675
chr17 56428197 56428212 FOXP1 JASPAR yes 21262676
chr17 56428197 56428218 IRF1 JASPAR yes 21262677
chr17 56428198 56428213 FOXP1 JASPAR yes 21262678
chr17 56428198 56428219 IRF1 JASPAR yes 21262679
chr17 56428199 56428214 FOXP1 JASPAR yes 21262680
chr17 56428199 56428220 IRF1 JASPAR yes 21262681
chr17 56428200 56428215 FOXP1 JASPAR yes 21262682
chr17 56428200 56428221 IRF1 JASPAR yes 21262683
chr17 56428201 56428216 FOXP1 JASPAR yes 21262684
chr17 56428201 56428222 IRF1 JASPAR yes 21262685
chr17 56428202 56428217 FOXP1 JASPAR yes 21262686
chr17 56428202 56428223 IRF1 JASPAR yes 21262687
chr17 56428203 56428218 FOXP1 JASPAR yes 21262688
chr17 56428203 56428224 IRF1 JASPAR yes 21262689
chr17 56428204 56428219 FOXP1 JASPAR yes 21262690
chr17 56428207 56428222 STAT2 JASPAR yes 21262691
chr17 56428214 56428226 IRF1 JASPAR yes 21262692
chr17 56428216 56428229 SCRT2 JASPAR yes 21262693
chr17 56428220 56428230 MSC JASPAR yes 21262694
chr17 56428230 56428234 LFA1 TRANSFAC yes 21262695
chr17 56428244 56428248 YY1 TRANSFAC yes 21262696
chr17 56428254 56428275 ZNF263 JASPAR yes 21262697
chr17 56428257 56428275 IRF2 JASPAR yes 21262698
chr17 56428267 56428271 YY1 TRANSFAC yes 21262699
chr17 56428278 56428291 POU2F2 JASPAR yes 21262700
chr17 56428290 56428294 YY1 TRANSFAC yes 21262701
chr17 56428294 56428297 MYB TRANSFAC yes 21262702
chr17 56428294 56428306 FOXI1 JASPAR yes 21262703
chr17 56428301 56428305 YY1 TRANSFAC yes 21262704
chr17 56428313 56428323 TEAD1 JASPAR yes 21262705
chr17 56428335 56428349 TCF7L2 JASPAR yes 21262706
chr17 56428355 56428359 YY1 TRANSFAC yes 21262707
chr17 56428361 56428368 NKX3-1 JASPAR yes 21262708
chr17 56428367 56428387 TP53 JASPAR yes 21262709
chr17 56428372 56428390 SRF JASPAR yes 21262710
chr17 56428374 56428392 SRF JASPAR yes 21262711
chr17 56428385 56428395 SMAD3 JASPAR yes 21262712
chr17 56428390 56428402 PKNOX1 JASPAR yes 21262713
chr17 56428390 56428402 TGIF2 JASPAR yes 21262714
chr17 56428395 56428399 YY1 TRANSFAC yes 21262715
chr17 56428398 56428407 NKX2-8 JASPAR yes 21262716
chr17 56428398 56428408 NKX2-3 JASPAR yes 21262717
chr17 56428415 56428425 CLOCK JASPAR yes 21262718
chr17 56428417 56428422 MYC TRANSFAC yes 21262719
chr17 56428417 56428422 USF1 TRANSFAC yes 21262720
chr17 56428417 56428422 USF2 TRANSFAC yes 21262721
chr17 56428417 56428424 USF1 JASPAR yes 21262722
chr17 56428420 56428426 ZNF354C JASPAR yes 21262723
chr17 56428422 56428427 GATA2 JASPAR yes 21262724
chr17 56428429 56428433 ESR1 TRANSFAC yes 21262725
chr17 56428459 56428474 MEF2C JASPAR yes 21262726
chr17 56428460 56428475 MEF2A JASPAR yes 21262727
chr17 56428469 56428472 MYB TRANSFAC yes 21262728
SNP sites on vista25294[chr17:56428194-56428499]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 56428197 rs556111217 C T
FOXP1 IRF1
4956071
chr17 56428283 rs78522389 T A
POU2F2
4956072
chr17 56428449 rs374336246 T C no 4956073
Genes possibly regulated by vista25294[chr17:56428194-56428499]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 56347217 56358296 - MPO ENSG00000005381.6 56358296 0.93 1.0 16085 30102
chr17 56378592 56406152 - BZRAP1 ENSG00000005379.11 56406152 0.77 0.93 16086 77958
chr17 56422539 56430454 - SUPT4H1 ENSG00000213246.2 56430454 0.63 0.99 16087 98045
chr17 56429861 56494956 - RNF43 ENSG00000108375.8 56494956 0.74 1.0 16088 33543
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25294[chr17:56428194-56428499]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results